Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mortierella_20alpina_20[genbank_20GCA_5F001021685.1_202015-06-08] 1,962 sequences; 36,305,198 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq1263 206 4e-48 seq1939 129 9e-25 seq1221 111 3e-19 >seq1263 Length=39644 Score = 206 bits (228), Expect = 4e-48 Identities = 360/518 (69%), Gaps = 7/518 (1%) Strand=Plus/Plus Query 159628 CTTCTTGTATTGCGACACATTCTTCTCGAAAAAGTTGGTCTTGCCCTCCATGGATATTGA 159687 ||||| ||| | ||| ||| |||||| || |||||||||||||||| | || || | Sbjct 12539 CTTCTGGTAATCCGAGACACGCTTCTCAAAGAAGTTGGTCTTGCCCTGGAGTGAGATCAA 12598 Query 159688 TTCCATGAACCCGAATGGGTTCTTCACGTGATAGCGCTTCGGAAATCCGAGAGCCGCCAG 159747 ||||| || |||| ||||||| |||| || |||| || |||||||| | || Sbjct 12599 GTCCATAAAGTCGAAGGGGTTCTCGACGTTGTAATGCTTGGGGTTACCGAGAGCGACGAG 12658 Query 159748 CAACCTGTCTGCCACAAATTCGATGTAGCTAC-ACATCTGCTCACAGTTGATCCCCAGCA 159806 || | ||| || ||||| |||||||| || | ||| ||| ||| || || | || Sbjct 12659 CAGACGGTCAGCAACAAACTCGATGTA-CTGCTTCATGAGCTTGGCGTTCATGCCGATCA 12717 Query 159807 GCCTAACGGGGAGCGCTTCCGACAGAAACTCCTTCTCAATCTCGACCGCTTCGGTCACAA 159866 || | |||||||| || |||| || ||||| | ||| || |||| || ||||| | | Sbjct 12718 GCATGACGGGGAGAGCATCCGTGAGGAACTCTTGCTCGATGGCGACAGCCTCGGTGATGA 12777 Query 159867 TCTGCGAGACACGTTCGTACCCCGGCTTGCCCAAAATGTGGTCCTTAAACAGGAGGCACG 159926 | | ||||||| | | | || || | ||| | | || || | ||| | Sbjct 12778 TGTCACAGACACGCTTCTGGTCAGGACGGCTCTTCATGAG---CGAGAAGAGCAAGCAGG 12834 Query 159927 CAAAGTCGCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGGACATGATGAGGCCCG 159986 |||||||| ||| || |||||||| |||||||||| |||||| || | | ||||||| | Sbjct 12835 CAAAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTCGAGAAGGTGAGGCCGG 12894 Query 159987 GCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCACCGCTAAAAAAGATCC 160046 |||||| |||||| |||||||| || |||| || || | || || ||||| | Sbjct 12895 GCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAACGATCCAGAGAAGAAGATAC 12954 Query 160047 CCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGTTGGTGTCATGGGTCC 160106 | || ||||| ||||| || || || | |||| |||| | | ||||| || | ||| Sbjct 12955 CTTCGACGGCGGCAAAGGCAACAAGACGCTCAGCAAAGGTCGAGTTGGCATCCGAGATCC 13014 Query 160107 ACCTTTTGGCCCATTCAGCCTTCTTTGCG-ATGCACGG 160143 || | |||||| |||||||| ||||| ||||| || Sbjct 13015 ACTTCAGGGCCCAGGCAGCCTTC-TTGCGAATGCAGGG 13051 >seq1939 Length=69097 Score = 129 bits (142), Expect = 9e-25 Identities = 443/680 (65%), Gaps = 18/680 (3%) Strand=Plus/Plus Query 203843 TCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCCGGTC 203902 ||||||||||||| ||||| | ||| ||||| | | | || ||||||||||| ||| Sbjct 1060 TCCACCGTGAACTTGATGGCATCCACTGCAGGACGCGTGCGGAGGTAGTACATGCCAGTC 1119 Query 203903 TTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGGGTCG 203962 || || ||||||| ||| || || | ||| || | ||| |||| ||| || Sbjct 1120 TTAAGACCCTTCTTCCAGCCATAGAACGCCATCGACGTCAGCTTGCCATAGTTCACATCT 1179 Query 203963 GCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGGCCAT 204021 |||| ||||||||||| ||||| ||||| ||| || ||||| ||||| || ||||| Sbjct 1180 GCCAAGTGAATGTTCATCGACTGCGACTGGTCAATG-AACGCGCCGCGATCCGCTGCCAT 1238 Query 204022 ATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTG-AACACGTCTCTGGTGTGTT 204080 | |||||| ||| ||||| | ||||||| ||||||| || || || || || Sbjct 1239 GTCAATAATGCACTTTTGCGACAGCTCCCACGTCGTCTTGTAAAGCGCCTTGAGTTCGTC 1298 Query 204081 GAGGCACATCTTCCCACG--TCC---TGATCGAGCCGTTGTCGGCCATCAGTCTCATCCT 204135 | || | ||| | ||| |||||| || |||| || | | || | Sbjct 1299 GGGG------ATGCCAGGGATCCGCTGGATCGATCCTCCCTCGGAAATGATGCGGTTCTT 1352 Query 204136 CGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGGTTGATGAT 204195 || ||| | |||| | || ||| ||| | || ||||| | ||| Sbjct 1353 GAGAGAGTCATTCCAAAGACCCATCTCGACCAGGTCCTTGAGCATCCAAGGGTTCACGAT 1412 Query 204196 CTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGTTCGAACGC 204255 ||| || ||||||| || || | || || | | |||| ||| | || ||||| Sbjct 1413 CTGGAACTCTCCGGCGAGGACACGGCGAGTATAAATGTTGGAGGTATAGGGCTCGAAGCA 1472 Query 204256 CTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGGAGCAGGGA 204315 ||||||| || | ||||| | ||| |||||| |||||||| || | | || || Sbjct 1473 CTCGTTGAAACCAAGGATCTGCGAGGTAGAGGCCGTAGGCATGGGTGCAACCAAAAGCGA 1532 Query 204316 GTTGCGCACACCGTATTTTTGGACCCTGCGCTTCAGAGAG-GT-CCAGTCGTGCATCGCA 204373 ||| || || |||| || | ||| || | ||| | || |||||| | || Sbjct 1533 GTTACGGACGCCGTGCTTGGCAATGCTG-GC-ACGGAGCGTGTCCCAGTCCCAGAGATCA 1590 Query 204374 CTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGACTGGGCTGCCCTTG 204433 |||||| | ||||||||||||||| ||| |||||||| | ||| || ||||| Sbjct 1591 CTGGGTGTGACGCCCCACATGTCGGGCTGCAAGATGCCCTTCGAGACCGGTGAGCCCTCA 1650 Query 204434 TACGTCGGATAAGGCTGATCCTCTTCTGCCAGCTTGCACGAGGCGGCCATGGCGTGATAG 204493 || ||| ||| | ||||| | ||||| | ||| || || ||| ||| | | Sbjct 1651 TAGGTCTCATACGTGCCCTCCTCCTGGGCCAGTTCGCAGGATGCCTCCAAGGCAGCGTGG 1710 Query 204494 TACATGGTCTCAAAGATCTG 204513 || ||||| ||||||||||| Sbjct 1711 TAGATGGTTTCAAAGATCTG 1730 >seq1221 Length=39966 Score = 111 bits (122), Expect = 3e-19 Identities = 457/714 (64%), Gaps = 45/714 (6%) Strand=Plus/Minus Query 203839 CTTGTCCACCGTGAACTGAATGGCGTTCACGGCAGGCCTGCTTCTCAGATAGTACATGCC 203898 || ||| |||||||||| ||||| | ||||| | | | | | || ||||||||||| Sbjct 36095 CTGGTCGACCGTGAACTTGATGGCATCGACGGCGGCGCGGGTGCGGAGGTAGTACATGCC 36036 Query 203899 GGTCTTTAGGCCCTTCTGCCACCCGTACATGTGCATGGAAGACAGTTTGCTCACGTTGGG 203958 ||||| || ||||| | ||| || || | | |||| | ||| || | ||| Sbjct 36035 TGTCTTGAGACCCTTTTTCCAGCCATAGAAGGCCATGCTCGTCAGCTTACCATAGTTCAC 35976 Query 203959 GTCGGCCATGTGAATGTTCAGAGACTGGCTTTGGTCGATGAAAGGCGCC-CGATCTGCGG 204017 ||||| |||||| ||||||| |||||| ||||| ||| || ||||| || || || | Sbjct 35975 GTCGGTCATGTGGATGTTCAATGACTGGGACTGGTCAATG-AACGCGCCTCGGTCCGCCG 35917 Query 204018 CCATATTGATAATGGTCTTCTGCGAAATCTCCCACACCGTCTTGAACA-----CG----- 204067 |||| | ||||||| ||| || ||||| | |||||| ||| || Sbjct 35916 CCATGTCAATAATGGACTTTTGACTGATCTCATAGCAGGTCTTGTACAGCATCCGCAGAT 35857 Query 204068 TCTCTGGTGTGTTGAGGCACATCTTCCCACGTCCTGATCGAGCCGTTGTCGGCCATCAGT 204127 |||||| || || || || | || ||| || || || ||||| || | Sbjct 35856 CCTCTGGGATGCTGGGG---ATGT-------TCTGGATGGACCCATTCTCGGCAATGATC 35807 Query 204128 CTCATCCTCGTCTCCTCCCCCCACATGCCCAACCTGATCAGCTCCCGCACCAGGTGGGGG 204187 | || | || ||||| || | || || ||| | || |||| Sbjct 35806 CGGTTCTTGAGAGTATCGGTCCACAATCCGCGCTCGACGAGGTCCTTGAGCATCCAGGGG 35747 Query 204188 TTGATGATCTGAAAGTCTCCGGACAGCACCCCTCGGGTGAACAGGTTGTTGGTGAATGGT 204247 || | |||||| || || || | ||||| | ||| ||| | | |||| |||| | || Sbjct 35746 TTCACGATCTGGAACTCGCCCGCGAGCACGCGTCGTGTGTAGATGTTGGAGGTGTAGGGC 35687 Query 204248 TCGAACGCCTCGTTGTTGCCGAAAATCTGAGCGGTGCTGGCCGTGGGCATGGGAGCCAGG 204307 || || ||| |||||||| | ||||| | ||| ||||||||||||||| || | Sbjct 35686 TCAAAGCACTCATTGTTGCCCAGGATCTGGGAGGTCGAGGCCGTGGGCATGGGCGCGACC 35627 Query 204308 AGCAGGGAGTTGCGCACACCGT------ATTTTTGGACCCTGCGCTTCAGAGAGGTCCAG 204361 || || |||||||| ||||||| | ||| | | | |||| || |||| Sbjct 35626 AGGAGCGAGTTGCGGACACCGTGGGCAGCGATCTGGGCGCGGAGCTT------GGGCCAG 35573 Query 204362 TCGTGCATCG--CACTGGGTTTCACGCCCCACATGTCGAACTGAAAGATGCCTTGACTGA 204419 || || || | |||| | ||||||||||||||| |||| ||| || | || Sbjct 35572 TC--CCACCGATCGGTGGGGGTGACGCCCCACATGTCGGGTTGAAGGATACCCTTGGAGA 35515 Query 204420 CTGGGCTGCCCTTGTACGTCGGATAAGGCTGATCCTCTTC---TGCCAGCTTGCACGAGG 204476 | ||| ||||| ||| ||| || | || ||||||| || || | ||| |||| Sbjct 35514 CGGGGGAGCCCTCGTAGGTCTCGTAGG---GACCCTCTTCCTGGGCGAGTTCGCAGGAGG 35458 Query 204477 CGGCCATGGCGTGATAGTACATGGTCTCAAAGATCTGAACGTTTAATCTGGCGG 204530 | | |||| | ||| || ||||||||||| | || | || | ||||||| Sbjct 35457 TCTCGAGGGCGGCGTGGTAGATCGTCTCAAAGATGTCAATG-TTCAGCTGGCGG 35405 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 795135698818720