Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mortierella_20alpina_20[genbank_20GCA_5F001021685.1_202015-06-08] 1,962 sequences; 36,305,198 total letters Query= NC_013953.1 Length=156344 Score E Sequences producing significant alignments: (Bits) Value seq1263 172 5e-38 seq1899 129 6e-25 seq1237 102 8e-17 seq1254 89.7 5e-13 >seq1263 Length=39644 Score = 172 bits (190), Expect = 5e-38 Identities = 299/429 (70%), Gaps = 8/429 (2%) Strand=Plus/Plus Query 132625 TTCTCaaaaaaaTTAGTTTTTCCCTCCAAGGAAATGAGCGTCATAAAATCCAAGGGGTTG 132684 |||||||| || || || || |||| | || || | |||||| || |||||||| Sbjct 12561 TTCTCAAAGAAGTTGGTCTTGCCCTGGAGTGAGATCAAGTCCATAAAGTCGAAGGGGTTC 12620 Query 132685 GCTGTGTTGTAGTGCTTGGTG---CCGATCAGGTCGACGAGCAGCCTGTCGGCCACGAAC 132741 | |||||| ||||||| | |||| || |||||||||| | ||| || || ||| Sbjct 12621 TCGACGTTGTAATGCTTGGGGTTACCGAG-AG--CGACGAGCAGACGGTCAGCAACAAAC 12677 Query 132742 TCGATGTATTGCGACATG-GTTTCGCAATTAAGTCCCAGCAGACGCACCGGCAGCGCTTC 132800 |||||||| ||| |||| | || || | | | || | ||| || || || || || Sbjct 12678 TCGATGTACTGCTTCATGAGCTTGGCGTTCATG-CCGATCAGCATGACGGGGAGAGCATC 12736 Query 132801 GGTGAGAAAGCGTTGCTCGATGGCGACCGCGTCGGTGACGATTTCCCTAACGCGCGCCGC 132860 ||||| || ||||||||||||||| || ||||||| ||| || | || ||| | Sbjct 12737 CGTGAGGAACTCTTGCTCGATGGCGACAGCCTCGGTGATGATGTCACAGACACGCTTCTG 12796 Query 132861 GCTCGGCCGTTGCACCAAATGCTTGAACATCAAGCAAGCAAAGTCGCAATGCAAGCCCTC 132920 | || || | || || ||| | |||||| ||||||||| || | ||||| Sbjct 12797 GTCAGGACGGCTCTTCATGAGCGAGAAGAGCAAGCAGGCAAAGTCGGTGTGGAGACCCTC 12856 Query 132921 GTCCCTGGAAATGAGTTCGTTGCTGAAAGTCAAGCCGGGCATGAGGCCGCGTTTTTTGAG 132980 ||| | || ||||| ||||| ||| || | |||||||||||| || || || ||||| Sbjct 12857 GTCACGAGAGATGAGCTCGTTCGAGAAGGTGAGGCCGGGCATGAGACCACGCTTCTTGAG 12916 Query 132981 CCAAAATATGGCGGCGAAACTGCCCGAAAAGAAGACGCCCTCGACGGCCGCGAAAGCCAC 133040 ||| || |||| |||||| || || ||||||| || |||||||| || || || || Sbjct 12917 CCAGAAGATGGAGGCGAACGATCCAGAGAAGAAGATACCTTCGACGGCGGCAAAGGCAAC 12976 Query 133041 CAGGCGCTC 133049 || ||||| Sbjct 12977 AAGACGCTC 12985 Score = 152 bits (168), Expect = 5e-32 Identities = 201/278 (72%), Gaps = 3/278 (1%) Strand=Plus/Plus Query 133165 ACGTAGGTGTCGATGAGGGTCGAATACATTTCCGAGTGTACGTTCTCCATGGCGATTTGA 133224 ||||| ||||| || | | ||| ||||| || ||||| || ||||| || ||| || Sbjct 13493 ACGTATGTGTCAATCAAGAGCGAGTACATCTCAGAGTGGACATTCTCAATCATGATCTGG 13552 Query 133225 AAGCCGTAAAAGCACCGCGCCTCGACCACCTGCACTTCTTGAGCGAAACGCTCGACCAGA 133284 || ||||||||||| | ||||| | ||| || || | | ||| ||||| | || Sbjct 13553 AATCCGTAAAAGCATCTTGCCTCTGGGATCTGGACCTCGTTCGAGAATCGCTCAAGCAAG 13612 Query 133285 TTTTCGTTGACGATGCCGTCGCTGGCGGCGAAAAAGGCCAGCACGTGCTTGATGAAATGG 133344 || |||||||| |||||||| ||||| ||||| || ||||| | |||| || || Sbjct 13613 TTCTCGTTGACAATGCCGTCACTGGCAGCGAAGAAAGCCAGGATGTGCGAGACAAAGAAT 13672 Query 133345 CGCTCGTTGTCGTTCAAGCG---CTCCCAGTCGCGCGTGTCCTTGGACAGGTCCACCTCC 133401 ||||||| | | || ||| |||||||||| || |||||||||| || || ||||| Sbjct 13673 CGCTCGTCGGCAGACATGCGGTTCTCCCAGTCGTGCATGTCCTTGGAGAGATCGACCTCT 13732 Query 133402 TCGACGGTCCAAAACGACGCCTCGGCTTTTTTGTACAT 133439 || | ||||| || || ||||| || || |||||||| Sbjct 13733 TCAGCAGTCCAGAAGGAGGCCTCAGCCTTCTTGTACAT 13770 >seq1899 Length=11869 Score = 129 bits (142), Expect = 6e-25 Identities = 168/230 (73%), Gaps = 2/230 (1%) Strand=Plus/Minus Query 38244 ATGCAAATATTCGTAAAAACGCTCACGGGCAAAACCATCACCGTCGACGTCGAGGCCACC 38303 ||||| || ||||| || || || || || || ||||||||| |||| |||||| | || Sbjct 5713 ATGCAGATTTTCGTCAAGACCCTGACTGGTAAGACCATCACCCTCGAGGTCGAGTCGTCC 5654 Query 38304 GACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGACAAAGAGGGAATTCCCGCCGACCA 38362 || | | | | |||| | || | || || | ||||| ||||| || ||| | ||||| Sbjct 5653 GATACCATCGATAACG-TCAAGCAGAAGATTCAGGACAAGGAGGGCATCCCCCCAGACCA 5595 Query 38363 ACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGCACCCTCAACGACTACAA 38422 ||||| ||||| | || ||||| ||||| || |||| || |||||| || ||||| Sbjct 5594 GCAGCGTCTCATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGTACCCTCTCTGATTACAA 5535 Query 38423 CATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGTTTGAGAGGCGGCC 38472 |||||| ||||| |||| || |||||||| || ||| | | || |||| Sbjct 5534 CATCCAGAAGGAGTCGACCCTCCATTTGGTCCTCCGTCTTCGTGGTGGCC 5485 Score = 102 bits (112), Expect = 8e-17 Identities = 132/180 (73%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 38281 TCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGAC 38339 ||||| |||| |||||| | | |||| | | | |||| | || | || |||| || Sbjct 5904 TCACCCTCGAGGTCGAGTCGTCGGACACCATCGACAACG-TCAAGCAGAAGATCCAAGAT 5846 Query 38340 AAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGAC 38399 || ||||| || ||| | ||||| ||||| ||||| | || ||||| ||||| || ||| Sbjct 5845 AAGGAGGGTATCCCCCCAGACCAGCAGCGCCTCATCTTTGCCGGCAAGCAGCTTGAGGAC 5786 Query 38400 GAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 | ||||||||| |||||||||||||| ||||| | || || || ||||| || ||| Sbjct 5785 GGCCGCACCCTCTCGGACTACAACATCCAGAAGGAGTCCACTCTTCACTTGGTCCTCCGT 5726 >seq1237 Length=85294 Score = 102 bits (112), Expect = 8e-17 Identities = 132/180 (73%), Gaps = 2/180 (1%) Strand=Plus/Minus Query 38281 TCACCGTCGACGTCGAGGCCACCGACAGCGTGCA-AACGCTTAAAGAAAAAATCCTCGAC 38339 ||||| |||| |||||| | | |||| | | | |||| | || | || |||| || Sbjct 35902 TCACCCTCGAGGTCGAGTCGTCGGACACCATCGACAACG-TCAAGCAGAAGATCCAAGAT 35844 Query 38340 AAAGAGGGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGAC 38399 || ||||| || ||| | ||||| ||||| ||||| | || ||||| ||||| || ||| Sbjct 35843 AAGGAGGGTATCCCCCCAGACCAGCAGCGTCTCATCTTTGCCGGCAAGCAGCTTGAGGAC 35784 Query 38400 GAGCGCACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 | || |||||| |||||||||||||| ||||| |||| || || ||||| || ||| Sbjct 35783 GGCCGTACCCTCTCTGACTACAACATCCAGAAGGAGTCGACCCTTCACTTGGTCCTCCGT 35724 >seq1254 Length=67957 Score = 89.7 bits (98), Expect = 5e-13 Identities = 88/114 (77%), Gaps = 0/114 (0%) Strand=Plus/Plus Query 38346 GGAATTCCCGCCGACCAACAGCGGCTCATTTACGCGGGCAAACAGCTGGACGACGAGCGC 38405 || |||||| | ||||| ||||| ||||| | ||| ||||| ||||| || || | ||| Sbjct 3263 GGTATTCCCCCAGACCAGCAGCGCCTCATCTTCGCCGGCAAGCAGCTTGAGGATGGCCGC 3322 Query 38406 ACCCTCAACGACTACAACATCCAAAAGGAAGCGACGCTGCATTTGGTGCTGCGT 38459 || ||| |||||||||||||| ||||| |||| || || ||||| || ||| Sbjct 3323 ACTCTCTCGGACTACAACATCCAGAAGGAGTCGACCCTCCACTTGGTCCTCCGT 3376 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 500160533262080