Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mortierella_20alpina_20[genbank_20GCA_5F001021685.1_202015-06-08] 1,962 sequences; 36,305,198 total letters Query= NC_014789.1 Length=184409 Score E Sequences producing significant alignments: (Bits) Value seq1939 257 2e-63 seq1263 125 8e-24 seq1142 96.9 4e-15 >seq1939 Length=69097 Score = 257 bits (284), Expect = 2e-63 Identities = 923/1425 (65%), Gaps = 39/1425 (3%) Strand=Plus/Plus Query 105895 GTTGACAATCACAAACTCTCCCGCGAGGGTTCTTCTCAGATAGATGTTCGTCGTGTAGGG 105954 ||| || ||| |||||||| |||||| | | ||| ||||| | || ||||| Sbjct 1404 GTTCACGATCTGGAACTCTCCGGCGAGGACACGGCGAGTATAAATGTTGGAGGTATAGGG 1463 Query 105955 TTCAAAGCATTCATTATTACCCAAGATTTGTGCGGTGGAGGCTGTTGGCATTGGTGCCAT 106014 || ||||| || || ||| | ||| || | ||| ||||| || ||||| ||||| | Sbjct 1464 CTCGAAGCACTCGTTGAAACCAAGGATCTGCGAGGTAGAGGCCGTAGGCATGGGTGCAAC 1523 Query 106015 CAAAAGACTGTTACGAAGACCCTTTTCCTTG--ATGCGTTCCTTGAGAACATCCCAGTCG 106072 |||||| |||||| ||| | | | | | |||| | ||| |||||||| Sbjct 1524 CAAAAGCGAGTTACG--GACGCCGTGCTTGGCAATGCTGGCACGGAGCGTGTCCCAGTCC 1581 Query 106073 TAGTTGAGC--TTGGTTTCACCTTCCCACATATCAAATTG-AAGCACCCCTTGG-GACGT 106128 || || | | ||| | || ||||||| || || ||| ||||| | ||| Sbjct 1582 CAGA-GATCACTGGGTGTGACGC-CCCACATGTCGGGCTGCAAGATGCCCTTCGAGACCG 1639 Query 106129 GGGAGAACCCTCAAATGTCTCATAGGAACCTTGGGCTTCAGCCAATTCACAGCTCGCCTC 106188 | ||| |||||| | |||||||| | || | | | |||| ||| ||| ||||| Sbjct 1640 GTGAG--CCCTCATAGGTCTCATACGTGCCCTCCTCCTGGGCCAGTTCGCAGGATGCCTC 1697 Query 106189 CAGGGATGCGTGATACATGGTTTCAAAGATACGAGCATTCATCTCCTTGGCTTCATCTGA 106248 || || ||||| || |||||||||||||| | | |||| | || || || Sbjct 1698 CAAGGCAGCGTGGTAGATGGTTTCAAAGATCTGCGTGTTCAAGACGCGAGCCTCTGGCGA 1757 Query 106249 ATCAAATGCGTAGCGGCACAAAATAAATACATCCGCGAGACCTTGAACACCCAAACCAAT 106308 |||||| | ||| | || ||| | || || | ||||||||||||| |||||| Sbjct 1758 ATCAAAGGGCATGCGCATCTTGATGAATGCGTCAGCCAATCCTTGAACACCCACACCAAT 1817 Query 106309 AGGTCTGTGTCGCATATTAGACTTTCGCGCAGTCTC---AACGGGATAAAAATTTCTGTC 106365 || | || ||||| || ||| ||| | | ||| ||| || || |||| || Sbjct 1818 GGGGCGATGACGCATGTTGGAC---CGCTCGGCCTCGGGAACCGGGTAGTAATTCACATC 1874 Query 106366 AATGACTCGGTTTAGATTTTTGGTAACAATCTTTGTGATTTCATGAAGTTTTTCATAATC 106425 ||||| ||||||||| ||| || | ||| |||| | || || | | | || Sbjct 1875 AATGATCTTGTTTAGATTGCGGGTGACGACCTTGGTGACCTTGTGGAGCATCTTGAAGTC 1934 Query 106426 AAAAGTGCGAGTCTCTTCATTGACATACTTTGGAAGGGCGATTGATGCCAAATTGCAAAC 106485 || | | | | ||||| || | || || |||| ||||| ||||| || Sbjct 1935 ----GTACACCTGGTTGC--TGACAAACGTGGGGAGAGCGACACTGGCCAAGTTGCACAC 1988 Query 106486 AGCCGTCTCATCCTTATCTG-TGTACTCTAAAATTTCTGTACACAAGTTGGAACTCTTAA 106544 |||| ||| || | ||| ||||||| | ||| ||||| ||||||||||| | ||||| Sbjct 1989 AGCCACCTCGTCGGGA-CTGCTGTACTCGACAATCTCTGTGCACAAGTTGGAGCACTTAA 2047 Query 106545 TCGTCCCCAAATTCTTTTGGTTACTCTTTTTGTTGCACGCATCCTTGTAGAGCATGTAGG 106604 | || ||||| || | ||||| ||| |||||| ||||||||||| ||||| |||| Sbjct 2048 TGGTTCCCAAGTTTTGCTGGTTGGACTTGCGGTTGCAGGCATCCTTGTAAAGCATATAGG 2107 Query 106605 GCGTCCCCGTCTCCGTCTGTGACTTGAGAATTGCCTTCCAC-ACATCGGCGGC-TGGTAC 106662 |||| |||||||| || || | || | ||| || | |||| || | | | | || || Sbjct 2108 GCGTTCCCGTCTCGGTTTGCGCCTCCAAAATCGCATACCACAACTTTTGAGCCTTGATAG 2167 Query 106663 AATGGCGTTGGCCCGTCCCTCCGCCTCGTACTTTGTGTAGAGGGCTTCAAACTCCTCACC 106722 | || ||| || |||||| ||||||| |||||| | ||||||||||| || Sbjct 2168 TCTTTCG--GGCGCGACCCTCCTTCTCGTACCGGTGGTAGAGCTCCTCAAACTCCTCGCC 2225 Query 106723 CACCGCGTCGGAGAGACCTGGTGCCTTGTCTGGACAGAAAAGAGACCATTGACCACCCTC 106782 | | || || || || |||| | || ||||| ||| ||| | ||| || Sbjct 2226 CCAAACATCTTGAAGGCCGGGGGCCTCAGCAGGGCAGAACAGACTCCAGTCTCCATTTTC 2285 Query 106783 CTCAACCCGCTTCATGAAAAGGTCTGGAATCCACAGGGATGAAAAGAGATCTCTACACCG 106842 |||| ||||||||||| || || || ||||| |||| | || ||||| | || Sbjct 2286 TTCAATGCGCTTCATGAACAGATCGGGGATCCAGAGGGCATAGAACAGATCACGGGCACG 2345 Query 106843 AGCCTCTTCGTCACCTTGGTTGAGTCGTAACTCAAGGAACTCCATGATATCCGCGTGCCA 106902 | |||||| | || ||| || | || | ||||| | || || |||||||| Sbjct 2346 GGACTCTTCCTTTCCAGTGTTCTTGCGAAGGTCCAAAAACTCAAAGACGTCTGCGTGCCA 2405 Query 106903 TGGCTCAAGATAGACTGCGATAGATCCCTTTCGACGC------CCAGCTTGATTTACATA 106956 ||||| || || | |||| | || | | ||| ||| | |||| ||||| Sbjct 2406 AGGCTCGAGGTACATGGCGAACGCACC---TGGGCGCTTGTTGCCACCCTGATCGACATA 2462 Query 106957 GCGCGCTGTGGCGTTAAATACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGT 107016 || || ||| ||| | ||||||||||| ||||||| |||| || | || || || Sbjct 2463 ACGGGCAGTGTTGTTGTACACGCGAAGCATAGGAATAAGGCCATTGGAGTATCCGTTGGT 2522 Query 107017 CCCCCGAATACGAGATTTATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGC 107076 || ||| ||| ||| | | | || |||| || || || || ||||| Sbjct 2523 TCCAGCAATGTATGATCCCGAGGCGCGAATGTTGTGAATGTTCAGACCGATTCCTCCAGC 2582 Query 107077 CCACTTTGAGATTTGCGCACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTC 107136 | ||| ||||| || || | | | || |||||||||| | ||| || || || Sbjct 2583 CGTCTTGGAGATCATGGCGCAGGTCTTCAACGTGTCATAGATACCCTCGATCGAATCGTC 2642 Query 107137 CTTGTTGGCGATAAGGAAGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAG 107196 ||| ||| | | |||||| || |||||||| ||||| || || || || || ||||| Sbjct 2643 CTTCATGGTCAGCAAGAAGCAGCTCGACATCTGGGGTCTGGGGGTTCCGGCGTTAAAGAG 2702 Query 107197 GGTTGGTGTTGCGTGAATGAACATACCTTGGGACATCTTGTCGTATGTCTCCAAGACAGA 107256 || || | || ||| |||| | || ||||| | || ||| ||||| | | Sbjct 2703 AGTGGGCGAAGCATGAGTGAAGAACTTTTCCGACATGTAGTTGTAGGTCTCGATAGCCTT 2762 Query 107257 ATCAATGTCTTCCCCGTGGATGCCGATGGCCACACGCATAAACAT 107301 || | || || |||||||| |||| | |||||||| ||||| Sbjct 2763 CTCGACATCATCGCCGTGGATTCCGACAGAGACACGCATCAACAT 2807 >seq1263 Length=39644 Score = 125 bits (138), Expect = 8e-24 Identities = 302/449 (67%), Gaps = 20/449 (4%) Strand=Plus/Plus Query 116995 ACTCGCTTCTCAAAGAAGTTGGTCTTCCCATCAAGGCTAATGTTTTCCATAAAGTCAAAT 117054 || ||||||||||||||||||||||| || | || || ||||||||||| || Sbjct 12555 ACACGCTTCTCAAAGAAGTTGGTCTTGCCCTGGAGTGAGATCAAGTCCATAAAGTCGAAG 12614 Query 117055 GGATTCTTCGCGTTCCAAA--TGGGTGGCACCC----CAACTTGTTTGAGGAGACGATCC 117108 || |||| |||| || | || | ||| | || ||| ||||| || Sbjct 12615 GGGTTCTCGACGTTGTAATGCTTGGGGTTACCGAGAGCGAC------GAGCAGACGGTCA 12668 Query 117109 GACACATACTCAATGTACTCGGACATCTTCTCAGAGTTCATACCGATGAG-ATTACATGG 117167 | ||| |||| ||||||| ||| || | |||||| ||||| || || || || Sbjct 12669 GCAACAAACTCGATGTACTGCTTCATGAGCTTGGCGTTCATGCCGATCAGCATGACG-GG 12727 Query 117168 GAGTGCGTCCAAGATGAACCCTTTCTCAATCTCAACCGCCTCTTTCACGATGGCGTGGAT 117227 ||| || ||| || |||| ||| ||| || | || ||||| | | |||| | || Sbjct 12728 GAGAGCATCCGTGAGGAACTCTTGCTCGATGGCGACAGCCTCGGTGATGATGTCACAGAC 12787 Query 117228 A-GTTTC-GGT-AGTGGGTCTATTACGCAAAGTCTTGAAGAGCTCCACGGCAAACTCCTG 117284 | | ||| ||| || | || || || | ||||||| |||||| || Sbjct 12788 ACGCTTCTGGTCAGGACGGCTCTT---CATGAGCGAGAAGAGCAAGCAGGCAAAGTCGGT 12844 Query 117285 GTGGAGACCCTCATCTCGGGAAATAAGTTCATTTGAGAAGCATAGGCCTGGCATGAGACC 117344 |||||||||||| || || || || || || || |||||| ||||| ||||||||||| Sbjct 12845 GTGGAGACCCTCGTCACGAGAGATGAGCTCGTTCGAGAAGGTGAGGCCGGGCATGAGACC 12904 Query 117345 CCGCTTCTTCAACCAATAAATAGCGCAGAATGACCCGGAGAAGAAGATACCCTCCACACA 117404 |||||||| | ||| | || | | ||| || || |||||||||||||| || || Sbjct 12905 ACGCTTCTTGAGCCAGAAGATGGAGGCGAACGATCCAGAGAAGAAGATACCTTCGACGGC 12964 Query 117405 CGCAAACGCAAAAAGGCGCTCGGCGAAGG 117433 ||||| |||| ||| ||||| || |||| Sbjct 12965 GGCAAAGGCAACAAGACGCTCAGCAAAGG 12993 >seq1142 Length=49763 Score = 96.9 bits (106), Expect = 4e-15 Identities = 258/389 (66%), Gaps = 9/389 (2%) Strand=Plus/Minus Query 106919 GCGATAGATCCCTTTCGA---CGCCCAGCTTGATTTACATAGCGCGCTGTGGCGTTAAAT 106975 |||| ||||| ||||| | ||| | || || ||| |||| || ||| | ||||| Sbjct 35807 GCGAATGATCCATTTCGCTTTCCGCCACCCTGGTTCACAAAGCGTGCAGTGTCATTAAAG 35748 Query 106976 ACGCGAAGCATTGGAATAATACCATCTGATTGACCATTTGTCCCCCGAAT--ACGAGATT 107033 ||||| ||||| || || ||||| | || | ||||| || || ||| | ||| | Sbjct 35747 ACGCGCAGCATGGGGATGATACCGTTCGAGTTTCCATTCGTTCCAGCAATGTAAGAGCCT 35688 Query 107034 TATTGGCTCTCACATCATGGATGTGCATCCCAATACCCCCAGCCCACTTTGAGATTTGCG 107093 | ||| | | | |||| | |||| ||| || || |||||||||| | Sbjct 35687 GA--GGCACGAATTTTTTGGAAACTAACGCCAACACCGCCGGCTGACTTTGAGATCAAGG 35630 Query 107094 CACACTCCGTAAGAGTTCCATAGATACCGTTGATTGAGTCCTCCTTGTTGGCGATAAGGA 107153 || | | ||||| | |||||||| | ||| || || | | || ||||| Sbjct 35629 AGCAGGTCTTCAGAGTGTCGTAGATACCCTCGATACTATCGTCTTGCATCTGGACAAGGA 35570 Query 107154 AGCAACTGGACATCTGCGGTCTTGGTGTACCAGCATTGAAGAGGGTTGGTGTTGCGTGAA 107213 | ||||| |||||||| || | || || ||||||||||| || || || || ||||| Sbjct 35569 AACAACTCGACATCTGGGGACGCGGAGTTCCAGCATTGAACAGTGTCGGGGTAGCGTGCG 35510 Query 107214 TGAACATACCT-TGGGACATCTTGTCGTATGTCTCCAAGACAGAATCAATGTCTTCCCCG 107272 |||| ||| | | ||||| || ||||||||| | ||| |||||||| ||| Sbjct 35509 TGAA-GTACTTCTCAGACATGAAGTGGTATGTCTCAATAGCAGCCTCAATGTCGCGTCCG 35451 Query 107273 TGGATGCCGATGGCCACACGCATAAACAT 107301 ||||||||||| | || | ||||| ||| Sbjct 35450 TGGATGCCGATCGAAACTCTCATAATCAT 35422 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 589966330720880