Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mortierella_20alpina_20[genbank_20GCA_5F001021685.1_202015-06-08] 1,962 sequences; 36,305,198 total letters Query= NC_015326.1 Length=346754 Score E Sequences producing significant alignments: (Bits) Value seq1237 161 2e-34 seq1899 127 5e-24 seq1939 100 6e-16 seq1186 86.0 1e-11 >seq1237 Length=85294 Score = 161 bits (178), Expect = 2e-34 Identities = 158/204 (77%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| || ||||| || ||||||||||| || | || || | || || |||||||| Sbjct 36043 GTGAAGGGTCGACTCCTTCTGAATATTGTAGTCAGAGAGGGTACGGCCGTCCTCGAGCTG 36102 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || |||||||| || || || ||||||||||| || || || ||||||||||| || Sbjct 36103 CTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGAGGGATACCCTCCTTGTCTTGAATCTT 36162 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 ||||||||||| ||||||||||||||| || || || ||||| | ||||| || || Sbjct 36163 CTGCTTGACGTTGTCAATGGTGTCCGAAGACTCGACCTCGAGGGTGATGGTCTTGCCGGT 36222 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 | || || ||||| | ||||| Sbjct 36223 AAGGGTCTTGACGAAAATCTGCAT 36246 Score = 152 bits (168), Expect = 1e-31 Identities = 156/204 (76%), Gaps = 0/204 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| || ||||| || || |||||||| || | || || | || || |||||||| Sbjct 35508 GTGAAGGGTCGACTCCTTCTGGATATTGTAGTCAGAGAGGGTACGGCCGTCCTCGAGCTG 35567 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || ||||| || || || |||||||| |||||||| || |||||||| || || Sbjct 35568 CTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTT 35627 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGT 195116 |||||||| || ||||||||||||||| ||||| || | || | ||||| || || Sbjct 35628 CTGCTTGACATTGTCAATGGTGTCCGAAGACTCCACCTCCAACGTGATGGTCTTGCCGGT 35687 Query 195117 CAAAGTTTTTACGAACACTTGCAT 195140 ||| || || ||||| | ||||| Sbjct 35688 CAAGGTCTTGACGAAAATCTGCAT 35711 Score = 109 bits (120), Expect = 1e-18 Identities = 123/165 (75%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 |||||| || ||||| || || || ||||| || | || || | || || || ||||| Sbjct 35736 GTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTACGGCCGTCCTCAAGCTG 35795 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || ||||| || || || |||||||| || || || || || ||||| || || Sbjct 35796 CTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGGGGGATACCCTCCTTATCTTGGATCTT 35855 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101 ||||||||||| || ||||||||||| || || || ||||| Sbjct 35856 CTGCTTGACGTTGTCGATGGTGTCCGACGACTCGACCTCGAGGGT 35900 >seq1899 Length=11869 Score = 127 bits (140), Expect = 5e-24 Identities = 150/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 194938 TGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTGC 194997 || || || ||||| || || || |||||||| | || || | || || ||||||||| Sbjct 5511 TGGAGGGTCGACTCCTTCTGGATGTTGTAATCAGAGAGGGTACGGCCGTCCTCGAGCTGC 5570 Query 194998 TTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTTT 195057 || || || ||||| || || || |||||||| || ||||| || ||||| ||||| || Sbjct 5571 TTGCCGGCAAAGATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGAATCTTC 5630 Query 195058 TGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGTAACCGTCTTTCCTGTC 195117 ||||||||||| || ||||| || || || || || ||||| | ||||| || ||| Sbjct 5631 TGCTTGACGTTATCGATGGTATCGGACGACTCGACCTCGAGGGTGATGGTCTTACCAGTC 5690 Query 195118 AAAGTTTTTACGAACACTTGCAT 195140 | || || ||||| | ||||| Sbjct 5691 AGGGTCTTGACGAAAATCTGCAT 5713 Score = 118 bits (130), Expect = 2e-21 Identities = 125/165 (76%), Gaps = 0/165 (0%) Strand=Plus/Plus Query 194937 GTGAAGAGTGGACTCTTTTTGAATATTGTAATCGGCAAGAGTTCTCCCATCTTCGAGCTG 194996 ||||||||||||||| || || || ||||| || | || || | || || || ||||| Sbjct 5738 GTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCAAGCTG 5797 Query 194997 CTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTTGTCTTGAATTTT 195056 ||| || || ||||| || || || |||||||| || || || || || ||||| || || Sbjct 5798 CTTGCCGGCAAAGATGAGGCGCTGCTGGTCTGGGGGGATACCCTCCTTATCTTGGATCTT 5857 Query 195057 TTGCTTGACGTTCTCAATGGTGTCCGAACTTTCCACTTCAAGGGT 195101 ||||||||||| || ||||||||||| || || || ||||| Sbjct 5858 CTGCTTGACGTTGTCGATGGTGTCCGACGACTCGACCTCGAGGGT 5902 >seq1939 Length=69097 Score = 100 bits (110), Expect = 6e-16 Identities = 190/280 (68%), Gaps = 0/280 (0%) Strand=Plus/Minus Query 160589 TTCTACGCCATCTGGACTTCCGATCTTTTCATGAAGAGAGTGAAAGACAATGGGGATTGG 160648 ||||| ||| |||||| ||||||| ||||||||| | | |||| ||||| || ||| Sbjct 2330 TTCTATGCCCTCTGGATCCCCGATCTGTTCATGAAGCGCATTGAAGAAAATGGAGACTGG 2271 Query 160649 AGCCTTTTCTGTCCCAATGAAGCGCCTGGACTTGATGATGTTTATGGTTCCGAGTTCGAG 160708 || || ||||| || ||| || || || ||| | ||||||| || ||||| ||| Sbjct 2270 AGTCTGTTCTGCCCTGCTGAGGCCCCCGGCCTTCAAGATGTTTGGGGCGAGGAGTTTGAG 2211 Query 160709 ACTCTTTATGAAAGATACGAAAAAGAGGGAAGAGCCAAAAAGGTCGTGAAGGCCCAAGAA 160768 || || | | ||||| || ||||| | ||| |||| | ||||| ||| | Sbjct 2210 GAGCTCTACCACCGGTACGAGAAGGAGGGTCGCGCCCGAAAGACTATCAAGGCTCAAAAG 2151 Query 160769 CTGTGGCATCACATCCTTGTCGCCCAAGTCGAGGTGGGTATGCCCTTTATCGCATACAAG 160828 ||||| || || | | || ||| |||| ||| | ||||| ||| |||||| Sbjct 2150 TTGTGGTATGCGATTTTGGAGGCGCAAACCGAGACGGGAACGCCCTATATGCTTTACAAG 2091 Query 160829 GATGCCATCTGTCGCAAGAGTAACCAGAAGAACTTTGGAA 160868 |||||| | |||||| |||||| | ||||| |||| Sbjct 2090 GATGCCTGCAACCGCAAGTCCAACCAGCAAAACTTGGGAA 2051 >seq1186 Length=23839 Score = 86.0 bits (94), Expect = 1e-11 Identities = 67/80 (84%), Gaps = 0/80 (0%) Strand=Plus/Minus Query 194985 ATCTTCGAGCTGCTTACCTGCGAAGATAAGTCGTTGTTGGTCTGGAGGAATGCCTTCTTT 195044 ||| || |||||||| ||||| ||||||||||| |||||||||||||| || || || | Sbjct 22564 ATCCTCCAGCTGCTTTCCTGCAAAGATAAGTCGCTGTTGGTCTGGAGGGATACCCTCCAT 22505 Query 195045 GTCTTGAATTTTTTGCTTGA 195064 ||||||||| ||| ||||| Sbjct 22504 ATCTTGAATTATTTCCTTGA 22485 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1109453709712854