Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mortierella_20alpina_20[genbank_20GCA_5F001021685.1_202015-06-08] 1,962 sequences; 36,305,198 total letters Query= NC_015398.1 Length=101487 Score E Sequences producing significant alignments: (Bits) Value seq1899 111 1e-19 seq1237 111 1e-19 >seq1899 Length=11869 Score = 111 bits (122), Expect = 1e-19 Identities = 143/196 (73%), Gaps = 10/196 (5%) Strand=Plus/Plus Query 34791 TCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCCAGCTGTTTTCCGGCAAAT 34850 || ||||| ||||| || || || ||| | || | || || ||||| || |||||||| Sbjct 5523 TCCTTCTGGATGTTGTAATCAGAGAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCAAAG 5582 Query 34851 ATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTAATCTTCTGTTTGACG--- 34907 || || || ||||||||| | || | ||||||||||| ||||||||| |||||| Sbjct 5583 ATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGAATCTTCTGCTTGACGTTA 5642 Query 34908 --GATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTTCCCGTGAGAGTCT 34965 |||| ||||| || | ||| || |||| ||| ||||| || || || || |||| Sbjct 5643 TCGATGGTATCG---GAC--GACTCGACCTCGAGGGTGATGGTCTTACCAGTCAGGGTCT 5697 Query 34966 TCACAAAGATCTGCAT 34981 | || || |||||||| Sbjct 5698 TGACGAAAATCTGCAT 5713 >seq1237 Length=85294 Score = 111 bits (122), Expect = 1e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| || || |||||||| || ||||| || ||| | || | || || Sbjct 36038 ACCAAGTGAAGGGTCGACTCCTTCTGAATATTGTAGTCAGAGAGGGTACGGCCGTCCTCG 36097 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || ||||| || || || || ||||||||| | || | ||||||||||| | Sbjct 36098 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGAGGGATACCCTCCTTGTCTTGA 36157 Query 34893 ATCTTCTGTTTGACGGATGCTATCGATTCACCGGCCTCAACATCGACGGTTATGGTTTTT 34952 |||||||| |||||| | || | || | ||| || |||| ||| ||||| || Sbjct 36158 ATCTTCTGCTTGACGTTGTCAATGGTGTCCGAAGACTCGACCTCGAGGGTGATGGTCTTG 36217 Query 34953 CCCGTGAGAGTCTTCACAAAGATCTGCAT 34981 || || || ||||| || || |||||||| Sbjct 36218 CCGGTAAGGGTCTTGACGAAAATCTGCAT 36246 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/214 (71%), Gaps = 8/214 (4%) Strand=Plus/Plus Query 34773 ACCAAGTGAATTGTGCTTTCTTTCTGAATGTTATAGTCCGAAAGGCTTCGTTCATCATCC 34832 |||||||||| || || ||||| || || ||||| || ||| | || | || || Sbjct 35503 ACCAAGTGAAGGGTCGACTCCTTCTGGATATTGTAGTCAGAGAGGGTACGGCCGTCCTCG 35562 Query 34833 AGCTGTTTTCCGGCAAATATTAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCGCTA 34892 ||||| || |||||||| || || || ||||||||| | || | ||||||||||| Sbjct 35563 AGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCTTGG 35622 Query 34893 ATCTTCTGTTTGACGGATGCTATCGAT--TCACCG--GCCTCAACATCGACGGTTATGGT 34948 |||||||| ||||| || | || || | ||| | ||| || || | || ||||| Sbjct 35623 ATCTTCTGCTTGAC--AT--TGTCAATGGTGTCCGAAGACTCCACCTCCAACGTGATGGT 35678 Query 34949 TTTTCCCGTGAGAGTCTTCACAAAGATCTGCATA 34982 || || || | ||||| || || ||||||||| Sbjct 35679 CTTGCCGGTCAAGGTCTTGACGAAAATCTGCATA 35712 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 324625837401936