Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mortierella_20alpina_20[genbank_20GCA_5F001021685.1_202015-06-08] 1,962 sequences; 36,305,198 total letters Query= NC_020845.1 Length=180977 Score E Sequences producing significant alignments: (Bits) Value seq1292 89.7 6e-13 >seq1292 Length=71268 Score = 89.7 bits (98), Expect = 6e-13 Identities = 177/262 (68%), Gaps = 0/262 (0%) Strand=Plus/Plus Query 139294 CAGACATATTTGCGAGCAGTGCTTGTGCTGTGCAGATGTTACTGGTTGCTTTGTCTCTTC 139353 ||| ||| || || || || || || || ||||||||||| ||| ||||| || | | Sbjct 22620 CAGCCATGTTGGCCAGGAGAGCCTGGGCCGTGCAGATGTTGGAGGTGGCTTTCTCGCGAC 22679 Query 139354 TAATATGCTGCTCTCTAGTTTGTAGTGCTAATCTGTATGCAGGATTGCCTTCGCTGTCCA 139413 ||| |||||||| | ||| || || || | | | | || || || | ||||||| Sbjct 22680 GAATGTGCTGCTCACGAGTCTGAAGGGCGAGGCGGAAGGCTTTGTTACCCTGGCTGTCCT 22739 Query 139414 CTGACTGACCTACAATTCTGCCAGGTATCTTTCTCTTATACTTGTCTGTTGTTGCAAAGA 139473 || ||| || | | ||| || ||| | | ||| | || || | ||||||| Sbjct 22740 TGGAGACACCGACGAGACGGCCGGGCATCCTGCGCTTGTGCTCATCCTTGCAGGCAAAGA 22799 Query 139474 ATGCAGCATGAGGACCTCCGTATCCCATAGGAATACCAAACCTTTGCATACTACCTACAG 139533 | |||||||| ||||| |||||||| | || | |||||| | ||| |||| | || Sbjct 22800 AGGCAGCATGGGGACCACCGTATCCGAGTGGCACACCAAAGCGCTGCGAGTTACCGAGAG 22859 Query 139534 CAATATCAAATCCCCACTCACC 139555 |||| ||| |||||||| || Sbjct 22860 CAATGTCAGCGCCCCACTCGCC 22881 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 578984200064240