Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mortierella_20alpina_20[genbank_20GCA_5F001021685.1_202015-06-08] 1,962 sequences; 36,305,198 total letters Query= NC_020851.1 Length=208007 Score E Sequences producing significant alignments: (Bits) Value seq1660 178 2e-39 seq1895 125 1e-23 seq321 98.7 1e-15 >seq1660 Length=24121 Score = 178 bits (196), Expect = 2e-39 Identities = 265/374 (71%), Gaps = 4/374 (1%) Strand=Plus/Plus Query 47787 TCCTGTGGCAATAACAAAATCATCAGGTTCTTCTTGTTGAAGCATTAACCACATAGCCTC 47846 ||| ||||| | ||||| ||||| || | || || ||||||||| ||||||| |||| Sbjct 23478 TCCCGTGGCCAGCACAAAGTCATCGGGCGCGTCCTGCTGAAGCATTCTCCACATACCCTC 23537 Query 47847 GACATAATCTCTGGCATGTCCCCAGTCACGAAGTGCATCAAGATTTCCTAGATATAAACA 47906 |||||| || | || || ||||| ||||| ||||| || || || ||||| | ||| Sbjct 23538 GACATAGTCACGTGCGTGACCCCAATCACGCTTGGCATCCAGGTTGCCAAGATACAGACA 23597 Query 47907 GTCTTGCTTACCTTCAGA--GATTGCTTTTAATGCTCTTGTAATCTTACGAGTTACAAAA 47964 || ||||| || ||| ||| | | || | || ||||| || || ||||| Sbjct 23598 CTCCTGCTTGCC--CAGGTGGATCGAGGCCACCGCACAGGTGATCTTGCGGGTGACAAAC 23655 Query 47965 GTTTCACCACGTCTTGGAGATTCATGATTAAAAAGAATACCACTACAGGCATACATTCCG 48024 || || || | ||| || || || || || || || ||| ||||||||||||| | | Sbjct 23656 GTGCGGCCGCGACGTGGGGACTCGTGGTTGAACAGGATGCCATTACAGGCATACATGCTG 23715 Query 48025 TATGATTCACGATAGTTCTTTACTATCCAGTACCCATAGAGTTTTGCAACACCATAAGGA 48084 || | || || |||||| | ||||||||| | || || || || |||||||| || Sbjct 23716 TACGCCTCGCGGTAGTTCACTGTGATCCAGTACGCGTACAGCTTGGCCACACCATAGGGC 23775 Query 48085 GAACGTGGATAGAAAGGTGTGGTCTCTGTCTGTGGAGTCTCTTGCACCTTACCATAAAGT 48144 || || || ||||| || || ||||| |||| ||| | || |||||||| || || || Sbjct 23776 GAGCGAGGGTAGAACGGGGTCGTCTCGCTCTGAGGAATGTCCTGCACCTTTCCGTACAGC 23835 Query 48145 TCACTGGTGGATGC 48158 ||| ||||||||| Sbjct 23836 TCAGAGGTGGATGC 23849 >seq1895 Length=127139 Score = 125 bits (138), Expect = 1e-23 Identities = 275/411 (67%), Gaps = 1/411 (0%) Strand=Plus/Plus Query 47757 CTCAACAAACTGACGGACAGAATATTGATTTCCTGTGGCAATAACAAAATCATCAGGTTC 47816 ||||||||||| |||||||| | | ||||||||| | ||||| ||||| | Sbjct 79538 CTCAACAAACTCACGGACAGTGTGCATCTCTCCTGTGGCGAGGACAAAGTCATCGGCAGT 79597 Query 47817 TTCTTGTTGAAGCATTAACCACATAGCCTCGACATAATCTCTGGCATGTCCCCAGTCACG 47876 || || || |||||| ||||||| |||||||||| || | ||| || ||||| ||||| Sbjct 79598 CTCCTGCTGGAGCATTCTCCACATACCCTCGACATAGTCGCGGGCGTGACCCCAATCACG 79657 Query 47877 AAGTGCATCAAGATTTCCTAGATATAAACAGTCTTGCTTACCTTCAGAGATTGCTTTTAA 47936 ||||| | ||||| || || | || || ||||| || || || | Sbjct 79658 CTTGGCATCCAAGTTTCCGAGGTAGAGGCACTCCTGCTTGCCAAGGTGAATGGCGGCAAC 79717 Query 47937 TGCTCTTGTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTGGAGATTCATGATTAAA 47996 || | || ||||| || || || ||||| ||||| | || || || || || || Sbjct 79718 AGCGCAGGTGATCTTGCGGGTAACGAAAGTGCGGCCACGGCGAGGCGACTCGTGGTTGAA 79777 Query 47997 AAGAATACCACTACAGGCATACATTCCGTATGATTCACGATAGTTCTTTACTATCCAGTA 48056 | || || | ||||| ||||| ||| | || || ||||| | |||||||| Sbjct 79778 CAAGATTCCGTTGCAGGCGTACATGTTGTAGGCCTCGCGGTAGTTGATGGTGATCCAGTA 79837 Query 48057 CCCATAGAGTTTTGCAACACCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTCTGTCTG 48116 | || | || ||||||||||| || || || || ||||| || ||||| || |||| Sbjct 79838 GGCGTACATCTTGGCAACACCATAGGGCGAGCGAGGGTAGAAGGGGGTGGTTTCGCTCTG 79897 Query 48117 TGGAGTCTCTTGCACCTTACCATAAAGTTCACTGGTGGATGCTTGATAGAT 48167 || |||| ||||| || || || || |||||| || | |||||| Sbjct 79898 AGGGATCTCAGCGACCTTTCCGTACAGCTCGGAGGTGGAAGCCT-ATAGAT 79947 >seq321 Length=72915 Score = 98.7 bits (108), Expect = 1e-15 Identities = 246/374 (66%), Gaps = 0/374 (0%) Strand=Plus/Plus Query 47752 GATTCCTCAACAAACTGACGGACAGAATATTGATTTCCTGTGGCAATAACAAAATCATCA 47811 |||| ||| ||||||| |||||| | | | ||| || || | ||||| || || Sbjct 44456 GATTTCTCGACAAACTCACGGACCGTGTGCATCTCTCCGGTCGCCAACACAAAGTCCTCG 44515 Query 47812 GGTTCTTCTTGTTGAAGCATTAACCACATAGCCTCGACATAATCTCTGGCATGTCCCCAG 47871 | || || || ||||| ||||||| |||||||||| || | || || ||||| Sbjct 44516 GCCGTCTCCTGCTGGAGCATCCTCCACATACCCTCGACATAGTCGCGAGCGTGACCCCAA 44575 Query 47872 TCACGAAGTGCATCAAGATTTCCTAGATATAAACAGTCTTGCTTACCTTCAGAGATTGCT 47931 ||||| || || | || || || || | || || ||||| || | ||| | Sbjct 44576 TCACGCTTCGCGTCCAAGTTACCGAGGTAGAGGCACTCCTGCTTGCCGAGATGGATCGAC 44635 Query 47932 TTTAATGCTCTTGTAATCTTACGAGTTACAAAAGTTTCACCACGTCTTGGAGATTCATGA 47991 | || | || ||||| || || ||||| || ||||| | || || || || Sbjct 44636 GCCACCGCACAGGTGATCTTGCGTGTGACAAAGGTACGGCCACGACGGGGGGACTCGTGG 44695 Query 47992 TTAAAAAGAATACCACTACAGGCATACATTCCGTATGATTCACGATAGTTCTTTACTATC 48051 || || | || || | ||||| ||||| | || | ||||| ||||| | ||| Sbjct 44696 TTGAACAAGATTCCGTTGCAGGCGTACATGTCATAGGCCTCACGGTAGTTGATCGTGATC 44755 Query 48052 CAGTACCCATAGAGTTTTGCAACACCATAAGGAGAACGTGGATAGAAAGGTGTGGTCTCT 48111 ||||| | || | || ||||||||||| || ||||| || ||||| || |||||||| Sbjct 44756 CAGTAGGCGTACATCTTGGCAACACCATAGGGCGAACGAGGGTAGAAGGGCGTGGTCTCG 44815 Query 48112 GTCTGTGGAGTCTC 48125 |||| || |||| Sbjct 44816 CTCTGGGGGATCTC 44829 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 665478078749840