Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mortierella_20alpina_20[genbank_20GCA_5F001021685.1_202015-06-08] 1,962 sequences; 36,305,198 total letters Query= NC_020852.1 Length=186468 Score E Sequences producing significant alignments: (Bits) Value seq1939 219 5e-52 seq1263 125 9e-24 seq321 114 2e-20 seq1142 93.3 5e-14 >seq1939 Length=69097 Score = 219 bits (242), Expect = 5e-52 Identities = 891/1388 (64%), Gaps = 27/1388 (2%) Strand=Plus/Minus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| | ||||| ||||| ||| | |||| |||||||| || || | || | Sbjct 2816 CCTCAGCATATGTTGATGCGTGTCTCTGTCGGAATCCACGGCGATGATGTCGAGAAGGCT 2757 Query 75272 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 75331 | ||||| ||| || | ||||| || | |||| ||| || | || || ||||| Sbjct 2756 ATCGAGACCTACAACTACATGTCGGAAAAGTTCTTCACTCATGCTTCGCCCACTCTCTTT 2697 Query 75332 AATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGAC 75391 || || || || || ||||| |||||||| || |||||| | | ||| ||||| || Sbjct 2696 AACGCCGGAACCCCCAGACCCCAGATGTCGAGCTGCTTCTTGCTGACCATGAAGGACGAT 2637 Query 75392 TCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGG 75451 || ||| | |||||||||| || | | | || || ||||| ||| |||||| Sbjct 2636 TCGATCGAGGGTATCTATGACACGTTGAAGACCTGCGCCATGATCTCCAAGACGGCTGGA 2577 Query 75452 GGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAAT 75511 || || || || |||| || | | | ||| ||| ||| || || || Sbjct 2576 GGAATCGGTCTGAACATTCACAACATTCGCGCCTCGGGATCATACATTGCTGGAACCAAC 2517 Query 75512 GGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTA 75571 || | || |||| ||||||| ||||||||||| | ||| ||| || || ||||| Sbjct 2516 GGATACTCCAATGGCCTTATTCCTATGCTTCGCGTGTACAACAACACTGCCCGTTATGTC 2457 Query 75572 AATCAAGCGGGGCGTC----GCAAGGGGTCCATCGCGGTCTACTTGGAACCATGGCATGC 75627 |||| | | ||| | || || | |||| | ||| | || || ||||| || Sbjct 2456 GATCAGG-GTGGCAACAAGCGCCCAGGTGCGTTCGCCATGTACCTCGAGCCTTGGCACGC 2398 Query 75628 CGATATCATGGAGTTCCTTGAGTTACGACTCAACCAAGGTGACGAAGAGGCTCGGTGTAG 75687 || || | ||||| | || | || ||| || | |||||| | || | Sbjct 2397 AGACGTCTTTGAGTTTTTGGACCTTCGCAAGAACACTGGAAAGGAAGAGTCCCGTGCCCG 2338 Query 75688 AGATCTCTTTTCATCCCTGTGGATTCCAGACCTTTTCATGAAGCGGGTTGAGGAGGGTGG 75747 ||||| || | |||| ||||| || || || ||||||||||| |||| || ||| Sbjct 2337 TGATCTGTTCTATGCCCTCTGGATCCCCGATCTGTTCATGAAGCGCATTGAAGAAAATGG 2278 Query 75748 TCAATGGTCTCTTTTCTGTCCAGACAAGGCACCAGGTCTCTCCGACGCGGTGGGTGAGGA 75807 | ||| ||| ||||| || | |||| || || || || | ||| ||||| Sbjct 2277 AGACTGGAGTCTGTTCTGCCCTGCTGAGGCCCCCGGCCTTCAAGATGTTTGGGGCGAGGA 2218 Query 75808 GTTTGAAGCCCTCTACACAAAGTATGAAGAGGAGGGTAGAGCCAATGCGACTGTACCAGC 75867 |||||| | |||||| ||| || |||||||| | ||| |||| | | || Sbjct 2217 GTTTGAGGAGCTCTACCACCGGTACGAGAAGGAGGGTCGCGCCCGAAAGACTAT-CAAGG 2159 Query 75868 CGCCGATGTT-TGGAAGGCTATTCTCAAATCACAGACGGAGACTGGAACACCATATATGC 75926 | | | ||| ||| | || ||| | | | || || ||||| ||||| || ||||||| Sbjct 2158 CTCAAAAGTTGTGGTATGCGATTTTGGAGGCGCAAACCGAGACGGGAACGCCCTATATGC 2099 Query 75927 TTTACAAGGATGCTTGTAACAAGAAGAGTAACCAAAAGAATTTGGGAACAATCAAGAGCT 75986 ||||||||||||| || ||| ||| ||||| | || |||||||| || ||| ||| Sbjct 2098 TTTACAAGGATGCCTGCAACCGCAAGTCCAACCAGCAAAACTTGGGAACCATTAAGTGCT 2039 Query 75987 CAAATCTTTGCACGGAAATTTTAGAGTACA-CAGATAAGGATGAGACGGCTGTTTGCAAT 76045 | || | ||||| || ||| | ||||||| ||| | || ||| |||||| ||||| Sbjct 2038 CCAACTTGTGCACAGAGATTGTCGAGTACAGCAG-TCCCGACGAGGTGGCTGTGTGCAAC 1980 Query 76046 TTGGCATCAATCGCCCTTCCAAAGTATGTCAATGAAGAGACTCGCACTTTTGATTATGAA 76105 ||||| |||| || || | || ||||| | | | | || || | | Sbjct 1979 TTGGCCAGTGTCGCTCTCCCCACGTTTGTCA--GCAACCAGGTGTAC----GACTTCAAG 1926 Query 76106 AAACTTCATGAAATCACAAAGATTGTTACCAAAAATCTAAACCGAGTCATTGACAGAAAT 76165 | || || | |||| ||| | || ||| ||||||||| ||||||| ||| Sbjct 1925 ATGCTCCACAAGGTCACCAAGGTCGTCACCCGCAATCTAAACAAGATCATTGATGTGAAT 1866 Query 76166 TTTTATCCCGTT---GAGACTGCGCGAAAGTCTAATATGCGACACAGACCTATTGGTTTG 76222 | || || ||| ||| | | ||| ||| || ||||| || | || |||||| || Sbjct 1865 TACTACCCGGTTCCCGAGGCCGAGCG---GTCCAACATGCGTCATCGCCCCATTGGTGTG 1809 Query 76223 GGTGTTCAAGGTCTCGCGGATGTATTTATTTTGTGCCGCTACGCATTTGATTCAGATGAA 76282 ||||||||||| | || || | ||| || | ||| | |||||||| || Sbjct 1808 GGTGTTCAAGGATTGGCTGACGCATTCATCAAGATGCGCATGCCCTTTGATTCGCCAGAG 1749 Query 76283 GCCAAGGAGATGAATGCTCGTATCTTTGAAACCATGTATCACGCATCCCTGGAGGCGAGT 76342 || | |||| | | |||||||||||||| || ||||| || ||||||| Sbjct 1748 GCTCGCGTCTTGAACACGCAGATCTTTGAAACCATCTACCACGCTGCCTTGGAGGCATCC 1689 Query 76343 TGTGAATTGGCTGAAGCCCAAGGTTCCTATGAGACATTTGAGGGTTCTCCCGCGTCCCAA 76402 || ||| |||| | | | || | |||||||| | |||||| || || | | | || Sbjct 1688 TGCGAACTGGCCCAGGAGGAGGGCACGTATGAGACCTATGAGGGCTCACCGGTCT-CGAA 1630 Query 76403 GGGGTGCTT-CAGTTTGATATGTGGGAAGGTGAAACCAA--GCTCAACTACGACTGGGAT 76459 ||| ||| ||| || ||||||| || | ||| | | || || |||||||| Sbjct 1629 GGGCATCTTGCAGCCCGACATGTGGG-GCGTCACACCCAGTGATC-TCTGGGACTGGGAC 1572 Query 76460 GTTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTTTTGATGGCACCAATG 76519 ||| | |||| || | || | |||||| |||||| | ||||| ||| Sbjct 1571 ACGCTCCGTGCCAGCATTGCCAAGCACGGCGTCCGTAACTCGCTTTTGGTTGCACCCATG 1512 Query 76520 CCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCATACACAACA 76579 || || ||||| ||| | || ||| | ||| || || ||||| || || || || | Sbjct 1511 CCTACGGCCTCTACCTCGCAGATCCTTGGTTTCAACGAGTGCTTCGAGCCCTATACCTCC 1452 Query 76580 AACATCTA 76587 ||||| || Sbjct 1451 AACATTTA 1444 >seq1263 Length=39644 Score = 125 bits (138), Expect = 9e-24 Identities = 302/449 (67%), Gaps = 20/449 (4%) Strand=Plus/Minus Query 65069 CCTTCGCCGAGCGCCTTTTTGCGTTTGCGTGTGTGGAGGGTATCTTCTTCTCCGGGTCAT 65128 |||| || ||||| ||| |||| ||||| || || |||||||||||||| || || | Sbjct 12993 CCTTTGCTGAGCGTCTTGTTGCCTTTGCCGCCGTCGAAGGTATCTTCTTCTCTGGATCGT 12934 Query 65129 TCTGCGCTATTTATTGGTTGAAGAAGCGGGGTCTCATGCCAGGCCTATGCTTCTCAAATG 65188 || | | || | ||| | |||||||| ||||||||||| ||||| |||||| || | Sbjct 12933 TCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGCCTCACCTTCTCGAACG 12874 Query 65189 AACTTATTTCCCGAGATGAGGGTCTCCACCAGGAGTTTGCCGTGGAGCTCTTCAAGACTT 65248 | || || || || || |||||||||||| || |||||| ||||||| | Sbjct 12873 AGCTCATCTCTCGTGACGAGGGTCTCCACACCGACTTTGCCTGCTTGCTCTTCTCGCTCA 12814 Query 65249 TGCGTAATAGACCCACT-ACC-GAAAC-TATCCACGCCATCGTGAAAGAGGCGGTTGAGA 65305 || || || | || ||| ||| | | || | |||| | | ||||| || | | Sbjct 12813 TG---AAGAGCCGTCCTGACCAGAAGCGTGTCTGTGACATCATCACCGAGGCTGTCGCCA 12757 Query 65306 TTGAGAAAGGGTTCATCTTGGACGCACTCCCATGTAAT-CTCATCGGTATGAACTCTGAG 65364 | ||| ||| |||| || ||| || ||||| || || || ||||| |||||| | || Sbjct 12756 TCGAGCAAGAGTTCCTCACGGATGCTCTCCC-CGTCATGCTGATCGGCATGAACGCCAAG 12698 Query 65365 AAGATGTCCGAGTACATTGAGTATGTGTCGGATCGTCTCCTCAAACAAGTTG----GGGT 65420 ||| ||||||| |||| ||| | || ||||| ||| || | ||| Sbjct 12697 CTCATGAAGCAGTACATCGAGTTTGTTGCTGACCGTCTGCTC------GTCGCTCTCGGT 12644 Query 65421 GCCACCCA--TTTGGAACGCGAAGAATCCATTTGACTTTATGGAAAACATTAGCCTTGAT 65478 | || | || |||| |||| || || ||||||||||| || || | Sbjct 12643 AACCCCAAGCATTACAACGTCGAGAACCCCTTCGACTTTATGGACTTGATCTCACTCCAG 12584 Query 65479 GGGAAGACCAACTTCTTTGAGAAGCGAGT 65507 || ||||||||||||||||||||||| || Sbjct 12583 GGCAAGACCAACTTCTTTGAGAAGCGTGT 12555 >seq321 Length=72915 Score = 114 bits (126), Expect = 2e-20 Identities = 311/474 (66%), Gaps = 14/474 (3%) Strand=Plus/Plus Query 177493 AGACCCACTTCCTTTTCGGCCGCACCCTCCCATGTGATCTCCTTTCCAACCTCTTTGAAG 177552 ||||| || |||| || |||| |||||||| |||| | |||| | ||||| Sbjct 44396 AGACCGACCTCCTCCTCTGCCGATCCCTCCCAACGGATCGTGCTCCCAATGGCCTTGAAC 44455 Query 177553 CACATTTCAACAAACTGCCTCACAGAGTGTGTCTCCCCCGTCGCGACAACATATTCATCA 177612 | | || ||||||| | || | ||| |||| || ||||| | ||| | || || Sbjct 44456 GATTTCTCGACAAACTCACGGACCGTGTGCATCTCTCCGGTCGCCAACACAAAGTCCTCG 44515 Query 177613 GCCTCTTCTTGTTGAAGCATGAGCCACATGGCTTCAACATAGTCCTTGGCATGACCCCAG 177672 ||| || || || ||||| |||||| | || |||||||| || |||||||| Sbjct 44516 GCCGTCTCCTGCTGGAGCATCCTCCACATACCCTCGACATAGTCGCGAGCGTGACCCCAA 44575 Query 177673 TCTCTGGCAGCGTTGAGGTTACCGAGTTCAAGGAACTCTCTCTCACCTTTCACAATTTGT 177732 || | |||| | ||||||||| | ||| |||| | ||| | | | | Sbjct 44576 TCACGCTTCGCGTCCAAGTTACCGAGGTAGAGGCACTC-----CTGCTTGCCGAGATGGA 44630 Query 177733 TTGACGCCATCA-----GTAATCTTCTTTGTGACAAAGT--CGGCACCTCGTCTCGGTGA 177785 | ||||||| | || ||||| |||||||||| |||| | || | || || Sbjct 44631 TCGACGCCACCGCACAGGTGATCTTGCGTGTGACAAAGGTACGGC--CACGACGGGGGGA 44688 Query 177786 TTCGTGGTTGAAGAGGATTCCGGAGCAGGCATACATACCATAGGATTCTCGGTAATTTTT 177845 ||||||||||| | ||||||| |||||| ||||| |||||| || ||||| || | Sbjct 44689 CTCGTGGTTGAACAAGATTCCGTTGCAGGCGTACATGTCATAGGCCTCACGGTAGTTGAT 44748 Query 177846 GACGAGCCAGTGAGCGGCCAATTTGGAGACGCCATAGACGGATCGTGGGTAGAAGGGTGT 177905 || ||||| ||| || |||| || |||||| || || ||||||||||| || Sbjct 44749 CGTGATCCAGTAGGCGTACATCTTGGCAACACCATAGGGCGAACGAGGGTAGAAGGGCGT 44808 Query 177906 CTCCTCAGTTTGTGGAGTTTCTCGGACTTTACCAAACATCTCCGAAGTTGAGGC 177959 ||| | || || | || ||| || || ||| |||||| || ||||| Sbjct 44809 GGTCTCGCTCTGGGGGATCTCGGCGACCTTTCCGTACAACTCCGAGGTAGAGGC 44862 >seq1142 Length=49763 Score = 93.3 bits (102), Expect = 5e-14 Identities = 244/368 (66%), Gaps = 6/368 (2%) Strand=Plus/Plus Query 75212 CCACAGTACATGTTCATGCGGGTCGCAATCGGCATCCACGGGGAAGACATTGATTCTGTC 75271 || ||| | ||| | ||| | || | |||||||||||||| |||||||| ||| Sbjct 35413 CCTCAGCATATGATTATGAGAGTTTCGATCGGCATCCACGGACGCGACATTGAGGCTGCT 35472 Query 75272 TTGGAGACATACGACAAGATGTCCCA-AGGTATGTTCATTCACGCAACACCAACCCTCTT 75330 | ||||||||| || ||||| | | ||| |||| ||||| || || || || || Sbjct 35473 ATTGAGACATACCACTTCATGTCTGAGAAGTAC-TTCACGCACGCTACCCCGACACTGTT 35531 Query 75331 CAATGCTGGTACACCAAGACCGCAGATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGA 75390 ||||||||| || || | || |||||||| ||||| |||||| || | | || || Sbjct 35532 CAATGCTGGAACTCCGCGTCCCCAGATGTCGAGTTGTTTCCTTGTCCAGATGCAAGACGA 35591 Query 75391 CTCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGG 75450 ||| | |||||||| | ||||| | | || | |||||||||| || || Sbjct 35592 TAGTATCGAGGGTATCTACGACACTCTGAAGACCTGCTCCTTGATCTCAAAGTCAGCCGG 35651 Query 75451 GGGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGT--ATTCGGGGGACA 75508 ||| |||| | |||| | | | ||| | | ||| | ||| || || Sbjct 35652 CGGTGTTGGCGTTAGTTTCCAAAAAATTCGTGCC--TCAGGCTCTTACATTGCTGGAACG 35709 Query 75509 AATGGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTAT 75568 ||||| | || | ||||| || || ||||| ||||| ||||| | ||| || |||| | Sbjct 35710 AATGGAAACTCGAACGGTATCATCCCCATGCTGCGCGTCTTTAATGACACTGCACGCTTT 35769 Query 75569 GTAAATCA 75576 || || || Sbjct 35770 GTGAACCA 35777 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 596554969130560