Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mortierella_20alpina_20[genbank_20GCA_5F001021685.1_202015-06-08] 1,962 sequences; 36,305,198 total letters Query= NC_021312.1 Length=459984 Score E Sequences producing significant alignments: (Bits) Value seq1939 150 5e-31 seq1230 125 2e-23 seq1221 118 3e-21 >seq1939 Length=69097 Score = 150 bits (166), Expect = 5e-31 Identities = 566/879 (64%), Gaps = 9/879 (1%) Strand=Plus/Plus Query 155627 GCTGTATTCTACAATCTCACAGCACAGGTTAGAACTCTTGATGGTGCCTAAATTCTTCTG 155686 |||||| || |||||||| ||||| ||| || | ||| ||||| || || || | ||| Sbjct 2007 GCTGTACTCGACAATCTCTGTGCACAAGTTGGAGCACTTAATGGTTCCCAAGTTTTGCTG 2066 Query 155687 GTTAGATTTACTGTTACAAGCATCCTTGTATAGAATGTATGGGGTTCCTGTCTCCATCTG 155746 ||| || || | ||| || ||||||||||| || || || || ||||| ||||| | || Sbjct 2067 GTTGGACTTGCGGTTGCAGGCATCCTTGTAAAGCATATAGGGCGTTCCCGTCTCGGTTTG 2126 Query 155747 TGCGTCCAGAATCTTTAGCCAGAGGTCACGGGCATTAATTTGCTTGTTGTATCTGCCTTC 155806 || |||| |||| ||| | | | || || || ||| | | || || Sbjct 2127 CGCCTCCAAAATCGCATACCACAACTTTTGAGCCTTGATAGTCTTTCGGGCGCGACCCTC 2186 Query 155807 CGACTCATATTTCATATACAGCGTTCGGTAA-TCCTCACCGTAACAATCACTCAGTCCAG 155865 | ||| || || ||| | | || ||||| || || ||| || || | Sbjct 2187 CTTCTCGTACCGGTGGTAGAGC-TCCTCAAACTCCTCGCCCCAAACATCTTGAAGGCCGG 2245 Query 155866 GGCACTTATCGGGGCAAAACAGCGACCAAATTTTATTACCGATTACACGCTCCATAAATA 155925 || || | | ||||| ||||| ||| | ||| | | |||| ||| || | Sbjct 2246 GGGCCTCAGCAGGGCAGAACAGACTCCAGTCTCCATTTTCTTCAATGCGCTTCATGAACA 2305 Query 155926 CATCACTCGCCCAAATAGCATAGAAAAGGTCCCTTGCCTTTGACTCCTCATCGCC-GTGA 155984 ||| ||| | |||||||| || || | || ||||| || | || ||| Sbjct 2306 GATCGGGGATCCAGAGGGCATAGAACAGATCACGGGCACGGGACTCTTCCTTTCCAGTG- 2364 Query 155985 TTCTTCCGTAGCTCTAAGAATTCCTCAATATCAGGATGGTGTGGCTCCAGATACATAGCA 156044 ||||| || || || || || || | || | || ||||| || ||||| || Sbjct 2365 TTCTTGCGAAGGTCCAAAAACTCAAAGACGTCTGCGTGCCAAGGCTCGAGGTACATGGCG 2424 Query 156045 AAACTACCATTCCTCTTG---CCACCCTGATCTACATACCGAGCAGTCTTATTGAAGACA 156101 || ||| | |||| ||||||||||| ||||| || ||||| || ||| | || Sbjct 2425 AACGCACCTGGGCGCTTGTTGCCACCCTGATCGACATAACGGGCAGTGTTGTTGTACACG 2484 Query 156102 CCTAGCATAGGAATAATACCATTGGAAGTGCCATTGGTTCCGCGAATATGCGAACCAGAT 156161 | ||||||||||||| |||||||| || |||||||| ||| | || || || Sbjct 2485 CGAAGCATAGGAATAAGGCCATTGGAGTATCCGTTGGTTCCAGCAATGTATGATCCCGAG 2544 Query 156162 GAGCGAACATTATGAATATGTAGTCCAATACCACCTGACCATTTAGAAATTTGAGCGCAT 156221 | ||||| || ||||| | || || || || || | | || || || ||||| Sbjct 2545 GCGCGAATGTTGTGAATGTTCAGACCGATTCCTCCAGCCGTCTTGGAGATCATGGCGCAG 2604 Query 156222 TCCTTTACAGTATTGAAAATACCTTCAATAGAATCATCTTCCATTGATAGTAGATAGCAC 156281 ||| | || | | ||||| || || ||||| || | ||| | || | |||| Sbjct 2605 GTCTTCAACGTGTCATAGATACCCTCGATCGAATCGTCCTTCATGGTCAGCAAGAAGCA- 2663 Query 156282 GAACTTAAT-TGAGGTCGTGGTGTTCCAGCGTTGAATAGTGTAGGTGTTGCATGAATAAA 156340 | | || || |||| || ||||| ||||| || || || || | |||||| | || Sbjct 2664 GCTCGACATCTGGGGTCTGGGGGTTCCGGCGTTAAAGAGAGTGGGCGAAGCATGAGTGAA 2723 Query 156341 ATACTTATTAGACATATAATCGTATGTCTCCTTAATCTTCTCAAGATTAGACCCGTGAAT 156400 |||| | ||||| || | ||| ||||| || |||||| | || | ||||| || Sbjct 2724 GAACTTTTCCGACATGTAGTTGTAGGTCTCGATAGCCTTCTCGACATCATCGCCGTGGAT 2783 Query 156401 ACAGATAGAGACCCTCATCCACATATGCTGAGGACGCTCTACAATCACTCCATCAATTCG 156460 | || |||||| | |||| ||||||||||||| | |||| | | | || || || || Sbjct 2784 TCCGACAGAGACACGCATCAACATATGCTGAGGTCTCTCTGCGACCTTGCCGTCGATGCG 2843 Query 156461 CAGAAGGTATGCGCGTTCCAGAGTTTTAAACCCGAAATA 156499 || ||||| | ||| |||| || || || || || || Sbjct 2844 GAGCAGGTACGAGCGCTCCAAGGTCTTGAATCCAAAGTA 2882 >seq1230 Length=34550 Score = 125 bits (138), Expect = 2e-23 Identities = 143/192 (74%), Gaps = 0/192 (0%) Strand=Plus/Minus Query 302648 CACGACCACCCATAGCATGGAAGAATAGCTCTTCCGGTCGTAGCCCCCCAATAAAGGAGC 302707 ||||||| ||||| || ||||| || | ||||| || || || | || | | ||| Sbjct 3352 CACGACCTCCCATGGCGTGGAAAAAGAACTCTTGAGGGGTCAGACCACGAAGATACGAGT 3293 Query 302708 TCTCAACGAAACCACGCGCCTCGGGCGAATCGTCGAACTTGGTAAAGTGTGGCAGGGTCC 302767 |||| |||||||| || ||||||||| | || |||||||||||| |||||||| | Sbjct 3292 TCTCGACGAAACCTCGACTCTCGGGCGAGTGATCATCCTTGGTAAAGTGAGGCAGGGTTC 3233 Query 302768 TGTTCTCATAGCCGTATGGGATACGCTTTCCATCAACGTTCTGCTGTCCCAGGCACGAAA 302827 ||| || | ||| | |||||||| || || |||||||||||||| |||| |||| Sbjct 3232 TGTACTTGAATCCGAACGGGATACGTTTACCCTCAACGTTCTGCTGACCCACACACGCCG 3173 Query 302828 TCATCTGCGAAA 302839 ||||||| |||| Sbjct 3172 TCATCTGTGAAA 3161 >seq1221 Length=39966 Score = 118 bits (130), Expect = 3e-21 Identities = 125/165 (76%), Gaps = 0/165 (0%) Strand=Plus/Minus Query 155595 GCCAGATTACATACCGCAGTCTCCTTGTCGTCGCTGTATTCTACAATCTCACAGCACAGG 155654 ||||||||||| ||||| ||| | | | |||||| || | |||||| ||||||| Sbjct 35140 GCCAGATTACAGACCGCCACCTCTTCGGGGCTGCTGTACTCGATGATCTCAGTGCACAGG 35081 Query 155655 TTAGAACTCTTGATGGTGCCTAAATTCTTCTGGTTAGATTTACTGTTACAAGCATCCTTG 155714 || || | |||||||||||| | ||||| |||||| ||||||| || || || |||||| Sbjct 35080 TTCGAGCACTTGATGGTGCCCAGATTCTGCTGGTTGGATTTACGATTGCAGGCGTCCTTG 35021 Query 155715 TATAGAATGTATGGGGTTCCTGTCTCCATCTGTGCGTCCAGAATC 155759 || || ||||| ||||| || ||||| |||| | || || ||| Sbjct 35020 TAAAGCATGTAAGGGGTCCCGGTCTCGGTCTGCGACTCGAGGATC 34976 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1471780601265194