Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mortierella_20alpina_20[genbank_20GCA_5F001021685.1_202015-06-08] 1,962 sequences; 36,305,198 total letters Query= NC_022646.1 Length=101818 Score E Sequences producing significant alignments: (Bits) Value seq1237 136 3e-27 seq1899 120 2e-22 seq1254 89.7 3e-13 >seq1237 Length=85294 Score = 136 bits (150), Expect = 3e-27 Identities = 158/213 (74%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||||| ||| |||||||||||| || ||||| || ||| | || | || Sbjct 36035 AGGACCAAGTGAAGGGTCGACTCCTTCTGAATATTGTAGTCAGAGAGGGTACGGCCGTCC 36094 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||||||||| || || ||||||||| | || | ||||||||||| Sbjct 36095 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGAGGGATACCCTCCTTGTCT 36154 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || |||||| | || | || | |||||| || | ||| |||||| Sbjct 36155 TGAATCTTCTGCTTGACGTTGTCAATGGTGTCCGAAGACTCGACCTCGAGGGTGATGGTC 36214 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 || || || |||||||| || || ||||||||| Sbjct 36215 TTGCCGGTAAGGGTCTTGACGAAAATCTGCATG 36247 Score = 107 bits (118), Expect = 1e-18 Identities = 151/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||||| ||| ||||||||| || || ||||| || ||| | || | || Sbjct 35500 AGGACCAAGTGAAGGGTCGACTCCTTCTGGATATTGTAGTCAGAGAGGGTACGGCCGTCC 35559 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||| ||||| || || ||||||||| | || | ||||||||||| Sbjct 35560 TCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCT 35619 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGATTCATTGGCCTCGACATCAACGGTTATGGTC 34945 | || || || ||||| | || | || | ||| || || | || |||||| Sbjct 35620 TGGATCTTCTGCTTGACATTGTCAATGGTGTCCGAAGACTCCACCTCCAACGTGATGGTC 35679 Query 34946 TTTCCCGTGAGGGTCTTTACAAAGATCTGCAT 34977 || || || | |||||| || || |||||||| Sbjct 35680 TTGCCGGTCAAGGTCTTGACGAAAATCTGCAT 35711 >seq1899 Length=11869 Score = 120 bits (132), Expect = 2e-22 Identities = 157/217 (72%), Gaps = 8/217 (4%) Strand=Plus/Plus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| || | ||| ||||||||| ||||| || || || ||| | || | || Sbjct 5502 AGGACCAAATGGAGGGTCGACTCCTTCTGGATGTTGTAATCAGAGAGGGTACGGCCGTCC 5561 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCTTGCGGCACCCCCTCCTTGTCG 34885 || || ||||| ||||| ||||| || || ||||||||| | || | ||||||||||| Sbjct 5562 TCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCC 5621 Query 34886 TTTATTTTTTGTTTGACGGATGCTATCGAT----TCATTGGCCTCGACATCAACGGTTAT 34941 | || || || ||||| | ||||||| || | |||||| || | ||| || Sbjct 5622 TGAATCTTCTGCTTGAC----GTTATCGATGGTATCGGACGACTCGACCTCGAGGGTGAT 5677 Query 34942 GGTCTTTCCCGTGAGGGTCTTTACAAAGATCTGCATG 34978 |||||| || || |||||||| || || ||||||||| Sbjct 5678 GGTCTTACCAGTCAGGGTCTTGACGAAAATCTGCATG 5714 >seq1254 Length=67957 Score = 89.7 bits (98), Expect = 3e-13 Identities = 79/99 (80%), Gaps = 0/99 (0%) Strand=Plus/Minus Query 34766 AGGACCAGGTGAATGGTGCTCTCCTTCTGAATGTTATAGTCCGATAGGCTGCGCTCATCG 34825 ||||||| ||| | ||| ||||||||| ||||| |||||||| || |||| |||| Sbjct 3372 AGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTGCGGCCATCC 3313 Query 34826 TCCAGTTGCTTTCCGGCGAAGATCAGTCGTTGCTGGTCT 34864 || || ||||| ||||||||||| || || ||||||||| Sbjct 3312 TCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCT 3274 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 325685012074478