Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mortierella_20alpina_20[genbank_20GCA_5F001021685.1_202015-06-08] 1,962 sequences; 36,305,198 total letters Query= NC_024446.1 Length=306862 Score E Sequences producing significant alignments: (Bits) Value seq1237 114 3e-20 seq1899 84.2 4e-11 >seq1237 Length=85294 Score = 114 bits (126), Expect = 3e-20 Identities = 165/230 (72%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || ||||| || || || || ||||| ||||| || |||| Sbjct 36018 TACCACCACGGAGACGGAGGACCAAGTGAAGGGTCGACTCCTTCTGAATATTGTAGTCAG 36077 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | ||||| || || || || || || ||||| || | || || ||||||| Sbjct 36078 AGAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGAG 36137 Query 82702 GTATTCCTTCCTTATCTTGAATCTT-TGCTTTTACATTTTCAATCGTATCATTAGGTTCT 82760 | || || ||||| ||||||||||| ||| || || || ||||| || || || || Sbjct 36138 GGATACCCTCCTTGTCTTGAATCTTCTGC-TTGACGTTGTCAATGGTGTCCGAAGACTCG 36196 Query 82761 ACTTCCAAAGTTATCGTCTTGCCTGTCAACGTCTTTACAAATATCTGCAT 82810 || || | || || |||||||| || | ||||| || || |||||||| Sbjct 36197 ACCTCGAGGGTGATGGTCTTGCCGGTAAGGGTCTTGACGAAAATCTGCAT 36246 Score = 84.2 bits (92), Expect = 4e-11 Identities = 110/151 (73%), Gaps = 1/151 (1%) Strand=Plus/Plus Query 82582 TACCTCCTCTCAAACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAG 82641 |||| || | | ||| || || ||||| || || || || ||||| || || || |||| Sbjct 35711 TACCACCACGGAGACGGAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAG 35770 Query 82642 ATAGAATTCTACCGTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAG 82701 | || | | ||||| || || || || || |||||||| || | || || ||||| | Sbjct 35771 AGAGGGTACGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGGG 35830 Query 82702 GTATTCCTTCCTTATCTTGAATCTT-TGCTT 82731 | || || ||||||||||| ||||| ||||| Sbjct 35831 GGATACCCTCCTTATCTTGGATCTTCTGCTT 35861 >seq1899 Length=11869 Score = 84.2 bits (92), Expect = 4e-11 Identities = 102/138 (74%), Gaps = 1/138 (1%) Strand=Plus/Plus Query 82595 ACGCAGAACTAAGTGCAGAGTAGATTCTTTCTGTATATTATAATCAGATAGAATTCTACC 82654 ||| || || ||||| ||||| || || ||||| || || || || || || | | || Sbjct 5726 ACGGAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCC 5785 Query 82655 GTCTTCTAGTTGTTTTCCAGCAAAGATTAGTCTTTGTTGATCTGGAGGTATTCCTTCCTT 82714 ||| || || || || || |||||||| || | || || ||||| || || || ||||| Sbjct 5786 GTCCTCAAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCTGGGGGGATACCCTCCTT 5845 Query 82715 ATCTTGAATCTT-TGCTT 82731 |||||| ||||| ||||| Sbjct 5846 ATCTTGGATCTTCTGCTT 5863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 981802518705118