Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mortierella_20alpina_20[genbank_20GCA_5F001021685.1_202015-06-08] 1,962 sequences; 36,305,198 total letters Query= NC_025960.1 Length=148981 Score E Sequences producing significant alignments: (Bits) Value seq1899 118 1e-21 seq1237 86.0 6e-12 >seq1899 Length=11869 Score = 118 bits (130), Expect = 1e-21 Identities = 152/210 (72%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 |||||||| | | | ||||| || || |||||||| || | |||||| || ||| Sbjct 5505 ACCAAATGGAGGGTCGACTCCTTCTGGATGTTGTAATCAGAGAGGGTACGGCCGTCCTCG 5564 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 ||||| || |||| | |||| |||||||| || ||||| || ||||| || || || | Sbjct 5565 AGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGA 5624 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || || || || | | || | ||||||| || ||| || |||| || | || ||| Sbjct 5625 ATCTTCTGCTTGACGTTATCGATGGTATCGGACGACTCGACCTCGAGGGTGATGGTCTTA 5684 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCATG 132124 |||||||| || || | ||||||||||||| Sbjct 5685 CCAGTCAGGGTCTTGACGAAAATCTGCATG 5714 >seq1237 Length=85294 Score = 86.0 bits (94), Expect = 6e-12 Identities = 145/210 (69%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 ||||| || | | | ||||| || ||||| |||||||| | |||||| || ||| Sbjct 36038 ACCAAGTGAAGGGTCGACTCCTTCTGAATATTGTAGTCAGAGAGGGTACGGCCGTCCTCG 36097 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 ||||| || |||| |||| |||||||| || |||||||| || || || || || | Sbjct 36098 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGAGGGATACCCTCCTTGTCTTGA 36157 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || || || || | | || | || || | | ||| || |||| || | || || Sbjct 36158 ATCTTCTGCTTGACGTTGTCAATGGTGTCCGAAGACTCGACCTCGAGGGTGATGGTCTTG 36217 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCATG 132124 || || || || || | ||||||||||||| Sbjct 36218 CCGGTAAGGGTCTTGACGAAAATCTGCATG 36247 Score = 84.2 bits (92), Expect = 2e-11 Identities = 144/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 131915 ACCAAATGTATGTTTGACTCTTTTTGAATGTTGTAGTCGCTCATGGTACGCGAATCTTCG 131974 ||||| || | | | ||||| || || || |||||||| | |||||| || ||| Sbjct 35503 ACCAAGTGAAGGGTCGACTCCTTCTGGATATTGTAGTCAGAGAGGGTACGGCCGTCCTCG 35562 Query 131975 AGCTGTTTACCGGAATAGATTAGACGCTGTTGATCTGGAGGTATGCCTTCTTTATCGGTA 132034 ||||| || |||| | |||| |||||||| || ||||| || ||||| || || || Sbjct 35563 AGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCTTGG 35622 Query 132035 ATTTTTTGTTTCAACTGTTCCACAGTATCGGTCGGCTCCACTTCGACCGTCAGCGTTTTA 132094 || || || || | | || | || || | | |||||| || | ||| | || || Sbjct 35623 ATCTTCTGCTTGACATTGTCAATGGTGTCCGAAGACTCCACCTCCAACGTGATGGTCTTG 35682 Query 132095 CCAGTCAGAGTTTTTATGAAAATCTGCAT 132123 || |||| || || | |||||||||||| Sbjct 35683 CCGGTCAAGGTCTTGACGAAAATCTGCAT 35711 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 476599511110320