Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mortierella_20alpina_20[genbank_20GCA_5F001021685.1_202015-06-08] 1,962 sequences; 36,305,198 total letters Query= NC_026511.1 Length=140913 Score E Sequences producing significant alignments: (Bits) Value seq1237 116 3e-21 seq1899 113 4e-20 >seq1237 Length=85294 Score = 116 bits (128), Expect = 3e-21 Identities = 141/192 (73%), Gaps = 0/192 (0%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| || || ||||| || | | ||| || |||| || |||||||| || ||||| Sbjct 35520 CTCCTTCTGGATATTGTAGTCAGAGAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCAAA 35579 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | |||| || ||||||||| |||||| ||||| | | | Sbjct 35580 GATGAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCTTGGATCTTCTGCTTGACATT 35639 Query 35665 TGCCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCAC 35724 | | ||||| || |||||||||| |||||| || || || ||||| || || || Sbjct 35640 GTCAATGGTGTCCGAAGACTCCACCTCCAACGTGATGGTCTTGCCGGTCAAGGTCTTGAC 35699 Query 35725 AAATATCTGCAT 35736 || |||||||| Sbjct 35700 GAAAATCTGCAT 35711 Score = 84.2 bits (92), Expect = 2e-11 Identities = 136/193 (70%), Gaps = 2/193 (1%) Strand=Plus/Plus Query 35545 CTCCTTTTGAATGTTGTAATCGGCCAAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAA 35604 |||||| ||||| ||||| || | | ||| || |||| || |||||||| || || || Sbjct 36055 CTCCTTCTGAATATTGTAGTCAGAGAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAA 36114 Query 35605 TATCAACCGCTGCTGGTCCGAAGGAACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGT 35664 || | ||||||||||| | ||| | | ||||||||| ||||| ||||| | || Sbjct 36115 GATGAGACGCTGCTGGTCTGGAGGGATACCCTCCTTGTCTTGAATCTTCTGCTTGA-CGT 36173 Query 35665 TG-CCACCGTGTCGCTCGATTCCACCTCCACCGTGATCGTTTTACCCGTCAAAGTTTTCA 35723 || | | ||||| || || ||||| | ||||| || || || || | || || | Sbjct 36174 TGTCAATGGTGTCCGAAGACTCGACCTCGAGGGTGATGGTCTTGCCGGTAAGGGTCTTGA 36233 Query 35724 CAAATATCTGCAT 35736 | || |||||||| Sbjct 36234 CGAAAATCTGCAT 36246 >seq1899 Length=11869 Score = 113 bits (124), Expect = 4e-20 Identities = 161/227 (71%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 35510 CCACCACGTAACCTCAACACCAAATGTAACGTACTCTCCTTTTGAATGTTGTAATCGGCC 35569 |||||||| | | | |||||||| | || |||||| || ||||||||||| | Sbjct 5487 CCACCACGAAGACGGAGGACCAAATGGAGGGTCGACTCCTTCTGGATGTTGTAATCAGAG 5546 Query 35570 AAGGTTCGCTCGTCGTCCAGCTGCTTACCCGCAAATATCAACCGCTGCTGGTCCGAAGGA 35629 | ||| || |||| || |||||||| || ||||| || | ||||||||||| | || Sbjct 5547 AGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGGGGG 5606 Query 35630 ACGCTCTCCTTGTCCATGATCTTTTGCTTCAGAGTTGCCACCGTGTCGCTCGATTCCACC 35689 | || |||||||||| ||||| ||||| | | | | || ||| ||| || ||| Sbjct 5607 ATGCCCTCCTTGTCCTGAATCTTCTGCTTGACGTTATCGATGGTATCGGACGACTCGACC 5666 Query 35690 TCCACCGTGATCGTTTTACCCGTCAAAGTTTTCACAAATATCTGCAT 35736 || | ||||| || ||||| |||| || || || || |||||||| Sbjct 5667 TCGAGGGTGATGGTCTTACCAGTCAGGGTCTTGACGAAAATCTGCAT 5713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 450782544286960