Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mortierella_20alpina_20[genbank_20GCA_5F001021685.1_202015-06-08] 1,962 sequences; 36,305,198 total letters Query= NC_027213.1 Length=214699 Score E Sequences producing significant alignments: (Bits) Value seq1939 190 3e-43 seq1142 123 3e-23 seq1263 118 1e-21 >seq1939 Length=69097 Score = 190 bits (210), Expect = 3e-43 Identities = 428/635 (67%), Gaps = 6/635 (1%) Strand=Plus/Plus Query 69598 CGTTTCATAAATAGATCGGGAATCCAAAGAGCTATA-AAGAGATCTCTGGTTCTATTTTC 69656 || ||||| || |||||||| ||||| || || ||| || ||||| | || | || Sbjct 2293 CGCTTCATGAACAGATCGGGGATCCAGAGGGC-ATAGAACAGATCACGGGCACGGGACTC 2351 Query 69657 TTCATTTCCTGTAttttttttAAGATCGAGAAACTCCATAATATCAGAATGCCATGGTTC 69716 ||| ||||| || || || ||| || | |||||| | | || | ||||| || || Sbjct 2352 TTCCTTTCCAGTGTTCTTGCGAAGGTCCAAAAACTCAAAGACGTCTGCGTGCCAAGGCTC 2411 Query 69717 TAGATATATCGCCATGACTCCCGGTCGTTTATTTCCTCCCTGATCTATGTATCTGGCAGT 69776 || || || || | | || || || || || || |||||||| | || | |||||| Sbjct 2412 GAGGTACATGGCGAACGCACCTGGGCGCTTGTTGCCACCCTGATCGACATAACGGGCAGT 2471 Query 69777 GTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCAGAAAT 69836 ||| || || || | ||||| ||||||| ||||| || | || || ||||||| ||| Sbjct 2472 GTTGTTGTACACGCGAAGCATAGGAATAAGGCCATTGGAGTATCCGTTGGTTCCAGCAAT 2531 Query 69837 ATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATTTTAGA 69896 || ||| |||||||| || ||| ||||| |||||||| ||| | || || Sbjct 2532 GTATGATCCCGAGGCGCGAATGTTGTGAATGTTCAGACCGATTCCTCCAGCCGTCTTGGA 2591 Query 69897 GATTAGAGCACAACGTTTCAATGTGTCATATATACCCTCTATGCTATCATCTATCATGTT 69956 ||| | || || ||||| |||||||| |||||||| || ||| || ||||| | Sbjct 2592 GATCATGGCGCAGGTCTTCAACGTGTCATAGATACCCTCGATCGAATCGTCCTTCATGGT 2651 Query 69957 AAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGTAGGAGA 70016 || | || ||||| ||||| || | ||||| || ||||| | || || || Sbjct 2652 CAGCAAGAAGCAGCTCGACATCTGGGGTCTGGGGGTTCCGGCGTTAAAGAGAGTGGGCGA 2711 Query 70017 TGCGTGAGTGAACCATTTTTCAGAAA-GCAGATTGTATGTTTCAATAGCTGATTCTATAT 70075 || |||||||| | ||||| || | | || ||||| || || ||||| || | || Sbjct 2712 AGCATGAGTGAAGAACTTTTCCGACATGTAG-TTGTAGGTCTCGATAGCCTTCTCGACAT 2770 Query 70076 CC-CACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTACCGTT 70134 | | | | || ||||| | | |||||||||||||||||||||||||| ||| | Sbjct 2771 CATCGCCG-TGGATTCCGACAGAGACACGCATCAACATATGCTGAGGTCTCTCTGCGACC 2829 Query 70135 TTATTATTTATTTTCAACAGGTATGATTTTTCCAGAGTTTTAAACCCAAAATAGTTGTAT 70194 || | || | |||||| || |||| || || || ||||| |||||||| Sbjct 2830 TTGCCGTCGATGCGGAGCAGGTACGAGCGCTCCAAGGTCTTGAATCCAAAGTAGTTGTAG 2889 Query 70195 GAAAAGTCTCTTTCGTAAATAATAACAGAATTTAG 70229 ||||| | ||||| || || |||| || || Sbjct 2890 TTGAAGTCGCGGTCGTAGATGATGGCAGAGTTCAG 2924 >seq1142 Length=49763 Score = 123 bits (136), Expect = 3e-23 Identities = 245/360 (68%), Gaps = 2/360 (1%) Strand=Plus/Minus Query 69772 GCAGTGTTATTATAGACTCTCAGCATCGGAATAATACCATTAGATTTACCATTTGTTCCA 69831 ||||||| |||| |||| | |||||| || || ||||| || || || ||||| |||||| Sbjct 35762 GCAGTGTCATTAAAGACGCGCAGCATGGGGATGATACCGTTCGAGTTTCCATTCGTTCCA 35703 Query 69832 GAAATATAACTTCCTCTTGCGCGAATATTACTAATAGATAGACCTATTCCTCCTGCCATT 69891 | ||| ||| ||| || ||||| || | | | || | || || || Sbjct 35702 GCAATGTAAGAGCCTGAGGCACGAATTTTTTGGAAACTAACGCCAACACCGCCGGCTGAC 35643 Query 69892 TTAGAGATTAGAGCACAACGT-TTCAATGTGTCATATATACCCTCTATGCTATCATCTAT 69950 || ||||| | || | | || |||| ||||| || |||||||| || ||||| ||| Sbjct 35642 TTTGAGATCA-AGGAGCAGGTCTTCAGAGTGTCGTAGATACCCTCGATACTATCGTCTTG 35584 Query 69951 CATGTTAAGAAGAAAACAGCTAGACATTTGATGATGTATAGTTCCCGCATTAAATAATGT 70010 ||| | | ||| ||||| || ||||| || || | |||||| ||||| || | ||| Sbjct 35583 CATCTGGACAAGGAAACAACTCGACATCTGGGGACGCGGAGTTCCAGCATTGAACAGTGT 35524 Query 70011 AGGAGATGCGTGAGTGAACCATTTTTCAGAAAGCAGATTGTATGTTTCAATAGCTGATTC 70070 || | ||||| ||||| | || ||||| | | | |||||| |||||||| | || Sbjct 35523 CGGGGTAGCGTGCGTGAAGTACTTCTCAGACATGAAGTGGTATGTCTCAATAGCAGCCTC 35464 Query 70071 TATATCCCACTGATGAATTCCTATCGCGACACGCATCAACATATGCTGAGGTCGTTCTAC 70130 || || | || || || |||| || | ||| | |||||||||||| || || || Sbjct 35463 AATGTCGCGTCCGTGGATGCCGATCGAAACTCTCATAATCATATGCTGAGGACGCTCGAC 35404 >seq1263 Length=39644 Score = 118 bits (130), Expect = 1e-21 Identities = 121/158 (77%), Gaps = 0/158 (0%) Strand=Plus/Plus Query 39614 AAGCAGGCGAAGTCACAATGTAGGCCCTCATCTCTACTAATTAATTCGTTAGAAAATGTG 39673 |||||||| ||||| || || ||||| || | | || | ||||| || || ||| Sbjct 12828 AAGCAGGCAAAGTCGGTGTGGAGACCCTCGTCACGAGAGATGAGCTCGTTCGAGAAGGTG 12887 Query 39674 AGTCCAGGCATTAGACCACGCTTTTTGAGCCAAAATATGGCAGCAAAAGATCCAGAAAAG 39733 || || ||||| ||||||||||| |||||||| || |||| || || |||||||| ||| Sbjct 12888 AGGCCGGGCATGAGACCACGCTTCTTGAGCCAGAAGATGGAGGCGAACGATCCAGAGAAG 12947 Query 39734 AAGATGCCTTCTACTGCTGCAAATGCAACAAGTCTCTC 39771 ||||| ||||| || || ||||| |||||||| | ||| Sbjct 12948 AAGATACCTTCGACGGCGGCAAAGGCAACAAGACGCTC 12985 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 686891953561680