Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mortierella_20alpina_20[genbank_20GCA_5F001021685.1_202015-06-08] 1,962 sequences; 36,305,198 total letters Query= NC_028093.1 Length=182309 Score E Sequences producing significant alignments: (Bits) Value seq1939 181 1e-40 seq1142 165 9e-36 seq1263 159 4e-34 >seq1939 Length=69097 Score = 181 bits (200), Expect = 1e-40 Identities = 906/1430 (63%), Gaps = 31/1430 (2%) Strand=Plus/Minus Query 104222 CCACAGTACATGTTCATGCGCGTGGCCATCGGTATTCATGGGGAAGACATTGATTCTGTC 104281 || ||| | ||||| ||||| || | |||| || || || || || | || | Sbjct 2816 CCTCAGCATATGTTGATGCGTGTCTCTGTCGGAATCCACGGCGATGATGTCGAGAAGGCT 2757 Query 104282 TTGGAGACATACGACAAGATGTCCCAAGGTATGTTCATTCACGCAACACCAACCCTCTTC 104341 | ||||| ||| || | ||||| || | |||| ||| || | || || ||||| Sbjct 2756 ATCGAGACCTACAACTACATGTCGGAAAAGTTCTTCACTCATGCTTCGCCCACTCTCTTT 2697 Query 104342 AATGCTGGTACACCAAGACCCCAAATGTCCAGTTGCTTCCTTATCGCCAACAAGGAGGAC 104401 || || || || || |||||||| ||||| || |||||| | | ||| ||||| || Sbjct 2696 AACGCCGGAACCCCCAGACCCCAGATGTCGAGCTGCTTCTTGCTGACCATGAAGGACGAT 2637 Query 104402 TCAATCAACGGTATCTATGGAACTCTTACGGAGTGTGCGCAAATCTCAAAGTGGGCTGGG 104461 || ||| | |||||||||| || | | | || || ||||| ||| |||||| Sbjct 2636 TCGATCGAGGGTATCTATGACACGTTGAAGACCTGCGCCATGATCTCCAAGACGGCTGGA 2577 Query 104462 GGTATTGGGATGCACATCCATGATGTGAGAGCCAATAAATCTCGTATTCGGGGGACAAAT 104521 || || || || |||| || | | | ||| ||| ||| || || || Sbjct 2576 GGAATCGGTCTGAACATTCACAACATTCGCGCCTCGGGATCATACATTGCTGGAACCAAC 2517 Query 104522 GGTCAATCAGATGGTATTATTCCAATGCTTCGCGTATTTAACGCCACAGCGCGCTATGTA 104581 || | || |||| ||||||| ||||||||||| | ||| ||| || || ||||| Sbjct 2516 GGATACTCCAATGGCCTTATTCCTATGCTTCGCGTGTACAACAACACTGCCCGTTATGTC 2457 Query 104582 AATCAAGCTGG------GCGTCGAAAGGGATCTATCGCAGTCTATCTTGAGCCATGGCAC 104635 |||| | ||| ||| | | || | |||| | || || ||||| |||||| Sbjct 2456 GATCAGGGTGGCAACAAGCGCCCA---GGTGCGTTCGCCATGTACCTCGAGCCTTGGCAC 2400 Query 104636 GCGGATATCATGGAGTTCCTTGAGTTGCGTCTCAACCAAGGTGACGAGGAGGCGCGGTGC 104695 || || || | ||||| | || | || ||| || | || ||| | || | Sbjct 2399 GCAGACGTCTTTGAGTTTTTGGACCTTCGCAAGAACACTGGAAAGGAAGAGTCCCGTGCC 2340 Query 104696 CGCGATCTCTTCTCCGCTCTCTGGATTCCAGATCTCTTCATGAAGAGAGTTGAGGAGAGT 104755 || ||||| |||| || |||||||| || ||||| ||||||||| | |||| || | | Sbjct 2339 CGTGATCTGTTCTATGCCCTCTGGATCCCCGATCTGTTCATGAAGCGCATTGAAGAAAAT 2280 Query 104756 GGCAATTGGTCTCTCTTTTGTCCAGACAAGGCACCTGGTCTCTCCGATGCCGTGGGTGAG 104815 || | ||| ||| || || || | |||| || || || |||| ||| ||| Sbjct 2279 GGAGACTGGAGTCTGTTCTGCCCTGCTGAGGCCCCCGGCCTTCAAGATGTTTGGGGCGAG 2220 Query 104816 GAGTTTGAAGCCCTTTACACAAAGTACGAGGAAGAAGGTCGGGCGACTGCGACGGTGCCA 104875 |||||||| | || ||| ||||||| | || ||||| || ||| | Sbjct 2219 GAGTTTGAGGAGCTCTACCACCGGTACGAGAAGGAGGGTCGCGCCCGAAAGACTATCAAG 2160 Query 104876 GCTGCCGATGTGTGGAAAGCTATTCTCAAGTCTCAAACCGAGACTGGTACACCATACATG 104935 ||| | ||||| | || ||| | || | ||||||||||| || || || || ||| Sbjct 2159 GCTCAAAAGTTGTGGTATGCGATTTTGGAGGCGCAAACCGAGACGGGAACGCCCTATATG 2100 Query 104936 CTTTACAAAGACGCCTGTAACCAAAAGAGTAATCAAAAGAATTTGGGTGTGATCAAGAGT 104995 |||||||| || ||||| |||| ||| || || | || ||||| || ||| | Sbjct 2099 CTTTACAAGGATGCCTGCAACCGCAAGTCCAACCAGCAAAACTTGGGAACCATTAAGTGC 2040 Query 104996 TCCAATCTCTGTACAGAAATCTTGGAATTTA-CAGACAAAGATGAGACGGCTGTGTGTAA 105054 ||||| | || ||||| || | || | | ||| | || ||| ||||||||| || Sbjct 2039 TCCAACTTGTGCACAGAGATTGTCGAGTACAGCAGTC-CCGACGAGGTGGCTGTGTGCAA 1981 Query 105055 CCTCGCATCAATCGCTCTCCCCAAGTATGT--GGATCCAGAGACAAAGACATTTGATTAT 105112 | | || |||||||||||| || ||| | | |||| | | ||| || | || Sbjct 1980 CTTGGCCAGTGTCGCTCTCCCCACGTTTGTCAGCAACCAG-GTGTACGAC--TTCAAGAT 1924 Query 105113 GAAAAACTCCACGAAGTTACGAAAACTGTCACCAAAAACCTAAACAGAGTTATTGATAGA 105172 | |||||| | || || || |||||| || ||||||| | |||||| Sbjct 1923 G-----CTCCACAAGGTCACCAAGGTCGTCACCCGCAATCTAAACAAGATCATTGATGTG 1869 Query 105173 AATTTTTACCCCGTT---GAGACTGCTCGTAAATCTAATATGAGACACCGTCCAATTGGT 105229 |||| ||||| ||| ||| | | || || || ||| | || || || |||||| Sbjct 1868 AATTACTACCCGGTTCCCGAGGCCGAGCG---GTCCAACATGCGTCATCGCCCCATTGGT 1812 Query 105230 CTCGGTGTTCAGGGTCTCGCGGATGTATTCATTCTTTGTCGCCACGCATTTGATTCCGAC 105289 | |||||||| || | || || | |||||| ||| | |||||||| Sbjct 1811 GTGGGTGTTCAAGGATTGGCTGACGCATTCATCAAGATGCGCATGCCCTTTGATTCGCCA 1752 Query 105290 GAAGCGAAGGAAATCAATGCGCGCATATTTGAGACCATGTATCACGCCGCTCTTGAGGCG 105349 || || | | || ||| || ||||| ||||| || ||||| || | ||||| Sbjct 1751 GAGGCTCGCGTCTTGAACACGCAGATCTTTGAAACCATCTACCACGCTGCCTTGGAGGCA 1692 Query 105350 AGTTCAGAGTTGGCAGAGGTTGATGGTCCATATGAAACCTTTGAGGGTTCTCCAGCTTCA 105409 | || |||| ||| || || | ||||| |||| |||||| || || | || Sbjct 1691 TCCTGCGAACTGGCCCAGGAGGAGGGCACGTATGAGACCTATGAGGGCTCACCGGTCTC- 1633 Query 105410 CAAGGGGTGCTT-CAATTTGATATGTGGGAAGGTGAGACCAAG-CTTCACTACGACTGGG 105467 ||||| ||| || || ||||||| || | ||| || || || ||||||| Sbjct 1632 GAAGGGCATCTTGCAGCCCGACATGTGGG-GCGTCACACCCAGTGATCTCTGGGACTGGG 1574 Query 105468 AAGCTCTCAAGGAACGCATCAAGGAGAAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAA 105527 | | ||| | |||| || | || | |||||| || | | || || | Sbjct 1573 ACACGCTCCGTGCCAGCATTGCCAAGCACGGCGTCCGTAACTCGCTTTTGGTTGCACCCA 1514 Query 105528 TGCCAACAGCCTCCACCGCACAAATCTTGGGTAATAATGAATGCTTTGAACCCTACACGA 105587 |||| || ||||| ||| | || ||| | ||| || || ||||| || ||||| || Sbjct 1513 TGCCTACGGCCTCTACCTCGCAGATCCTTGGTTTCAACGAGTGCTTCGAGCCCTATACCT 1454 Query 105588 CGAACATCTATCTGAGAAGAACCCTCGCGGGAGAGTTTGTGATTGTCAAC 105637 | ||||| ||| | | |||||| |||||||| ||| || ||| Sbjct 1453 CCAACATTTATACTCGCCGTGTCCTCGCCGGAGAGTTCCAGATCGTGAAC 1404 >seq1142 Length=49763 Score = 165 bits (182), Expect = 9e-36 Identities = 428/644 (66%), Gaps = 24/644 (4%) Strand=Plus/Plus Query 104966 AATCAAAAGAATTTGGGTGTGATCAAGAGTTCCAATCTCTGTACAGAAATCTTGGAATTT 105025 ||||||||||| ||||| || | | || || || || ||||| || | |||| Sbjct 36350 AATCAAAAGAACTTGGGCACCATTACCTGCTCTAACCTGTGCACAGAGATTATCGAATAC 36409 Query 105026 ACAGACAAAGATGAGACGGCTGTGTGTAACCTCGCATCAATCGCTCTCCCCAAGTATGTG 105085 || | ||||||| |||||| ||||||||||| || || || || ||||||| |||| Sbjct 36410 ACCGCGCCAGATGAGGTGGCTGTCTGTAACCTCGCCTCCATTGCGCTGCCCAAGTTTGTG 36469 Query 105086 GATCCAGAGACAAAGACATTTGATTATGAAAAACTCCACGAAGTTACGAAAACTGTCACC 105145 || |||| ||| || || | || | | ||| | ||| || || ||| Sbjct 36470 GACGTCAAGACCAAGCAGTTCGACTTTGCGCAGATGCACAACGTTGTCAAGGTTGCTACC 36529 Query 105146 AAAAACCTAAACAGAGTTATTGATAGAAATTTTTACCCCGT---TGAGACTGCTCGTAAA 105202 || ||| | |||| || ||||| | || || ||||| || |||| ||| || Sbjct 36530 AAGAACTTGAACAAGGTCATTGACCGCAACTTCTACCCGGTTCCTGAG---GCTGAGAAG 36586 Query 105203 TCTAATATGAGACACCGTCCAATTGGTCTCGGTGTTCAGGGTCTCGCGGATG---TATTC 105259 ||| | | | ||||| || || ||||||||| ||||||| ||||| |||| | || Sbjct 36587 AGTAACAAGCGCCACCGCCCCATCGGTCTCGGTATTCAGGGACTCGCTGATGCCTTTGTC 36646 Query 105260 ATTCTTTGTCGCCACGCATTTGATTCCGACGAAGCGAAGGAAATCAATGCGCGCATATTT 105319 || || ||| | || ||||| || ||| ||| | | || | ||| || Sbjct 36647 ATGCT---TCGATATGCTTTTGACTCTCCCGAGGCGCGCCAGTTGAACAAGGACATTTTC 36703 Query 105320 GAGACCATGTATCACGCCGCTCTTGAGGCGAGTTCA---GAGTTGGCAGAGGTTGATGGT 105376 ||||| | || ||||| ||| | ||||| |||| ||| | || |||| ||||| Sbjct 36704 GAGACGCTCTACCACGCTGCTTTGGAGGC---TTCATGCGAGATTGCTCAGGTGGATGGA 36760 Query 105377 CCATATGAAACCTTTGAGGGTTCTCCAGCTTCA--CAAGGGGTGCTTCAATTTGATATGT 105434 || ||||| |||| ||||| ||||| | ||| || || | || || | || |||| Sbjct 36761 CCCTATGAGACCTACGAGGGATCTCC--CGTCAGCCAGGGCATTCTCCAGTACGACATGT 36818 Query 105435 GGGAAGGTGAGACCAAGC-TTCACTACGACTGGGAAGCTCTCAAGGAACGCATCAAGGAG 105493 |||| || | || ||| | || |||||||| |||||||| ||||||| || Sbjct 36819 -GGAACGTCAAGCCCAGCAGCCGCTGGGACTGGGATCTGCTCAAGGAGAACATCAAGAAG 36877 Query 105494 AAGGGTCTTCGTAACAGTCTCCTCATGGCTCCAATGCCAACAGCCTCCACCGCACAAATC 105553 | ||| | || ||| ||||| |||| || ||||| || ||||| ||| || ||| Sbjct 36878 TACGGTGTCCGCAACTCGCTCCTGGTGGCACCCATGCCGACTGCCTCGACCAGTCAGATC 36937 Query 105554 TTGGGTAATAATGAATGCTTTGAACCCTACACGACGAACATCTA 105597 |||| || || || ||||| || |||||||| | ||||| || Sbjct 36938 CTGGGCAACAACGAGTGCTTCGAGCCCTACACATCCAACATTTA 36981 >seq1263 Length=39644 Score = 159 bits (176), Expect = 4e-34 Identities = 171/225 (76%), Gaps = 6/225 (3%) Strand=Plus/Minus Query 94734 AGTTCCGTGTATTCAAAAGAAAGCGGATTGGGCTATGAAGTGGTTT---GATACAAAGTC 94790 |||||| || |||| ||||| || | ||||| |||||||| | ||| | || || Sbjct 13055 AGTTCCCTGCATTCGCAAGAAGGCTGCCTGGGCCCTGAAGTGGATCTCGGATGCCAACTC 12996 Query 94791 GCGTTCCTTTGCTGAGCGACTCTTCGCATTTGCGTGTGTTGAGGGTATCTTCTTCTCTGG 94850 | ||||||||||||| || | || ||||| || || ||||||||||||||||| Sbjct 12995 GA---CCTTTGCTGAGCGTCTTGTTGCCTTTGCCGCCGTCGAAGGTATCTTCTTCTCTGG 12939 Query 94851 TTCCTTCTGCGCTATTTATTGGCTCAAGAAGCGAGGTCTCATGCCAGGTCTCTGCTTCTC 94910 || ||| | | || | |||||||||||||| ||||||||||| || ||| |||||| Sbjct 12938 ATCGTTCGCCTCCATCTTCTGGCTCAAGAAGCGTGGTCTCATGCCCGGCCTCACCTTCTC 12879 Query 94911 CAACGAGCTTATCTCTCGTGACGAGGGACTCCACCAAGAGTTTGC 94955 |||||||| ||||||||||||||||| |||||| || ||||| Sbjct 12878 GAACGAGCTCATCTCTCGTGACGAGGGTCTCCACACCGACTTTGC 12834 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 583246495528880