Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mortierella_20alpina_20[genbank_20GCA_5F001021685.1_202015-06-08] 1,962 sequences; 36,305,198 total letters Query= NC_028491.1 Length=98392 Score E Sequences producing significant alignments: (Bits) Value seq1899 105 4e-18 seq1237 100 2e-16 >seq1899 Length=11869 Score = 105 bits (116), Expect = 4e-18 Identities = 163/230 (71%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 34479 GCCGCCTCTAAGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGA 34538 ||| || | |||||| | ||||||||||| || |||||| || ||||| ||||| || Sbjct 5486 GCCACCACGAAGACGGAGGACCAAATGGAGGGTCGACTCCTTCTGGATGTTGTAATCAGA 5545 Query 34539 AAGTGTTCGCTCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGG 34598 || || || |||| || || || || |||||||| || | |||||| ||||| || || Sbjct 5546 GAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGGGG 5605 Query 34599 CACTCCCTCCTTGTCTGTGATCTTTTGTTTTAACGATA-AAATTGTGTCTTCGCTCTCCA 34657 | ||||||||||| ||||| || || ||| || || || || ||| | Sbjct 5606 GATGCCCTCCTTGTCCTGAATCTTCTG-CTTGACGTTATCGATGGTATCGGACGACTCGA 5664 Query 34658 CTTCCACGGTTATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 | || | ||| || || ||||| || | || || || |||||||||||| Sbjct 5665 CCTCGAGGGTGATGGTCTTACCAGTCAGGGTCTTGACGAAAATCTGCATG 5714 >seq1237 Length=85294 Score = 100 bits (110), Expect = 2e-16 Identities = 153/218 (70%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||| || || || |||||| || || || || || || || || || Sbjct 35494 AGACGGAGGACCAAGTGAAGGGTCGACTCCTTCTGGATATTGTAGTCAGAGAGGGTACGG 35553 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| || || || || |||||||| || | |||||| ||||| || || | |||||| Sbjct 35554 CCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGGGGAATGCCCTCC 35613 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGATAAAATTGTGTCTTCGCTCTCCACTTCCACGGTT 34668 |||||| |||||| || || | ||| ||||| |||||| |||| || Sbjct 35614 TTGTCTTGGATCTTCTGCTTGACATTGTCAATGGTGTCCGAAGACTCCACCTCCAACGTG 35673 Query 34669 ATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCAT 34706 || || || ||||| || || || || ||||||||||| Sbjct 35674 ATGGTCTTGCCGGTCAAGGTCTTGACGAAAATCTGCAT 35711 Score = 93.3 bits (102), Expect = 3e-14 Identities = 154/220 (70%), Gaps = 2/220 (1%) Strand=Plus/Plus Query 34489 AGACGCAACACCAAATGGAGAGTGCTCTCCTTTTGAATGTTATAATCTGAAAGTGTTCGC 34548 ||||| | ||||| || || || |||||| ||||| || || || || || || || Sbjct 36029 AGACGGAGGACCAAGTGAAGGGTCGACTCCTTCTGAATATTGTAGTCAGAGAGGGTACGG 36088 Query 34549 TCGTCTTCAAGTTGTTTACCGGCAAATATTAAACGCTGTTGGTCCGGCGGCACTCCCTCC 34608 |||| || || || || ||||| || || | |||||| ||||| || || | |||||| Sbjct 36089 CCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGAGGGATACCCTCC 36148 Query 34609 TTGTCTGTGATCTTTTGTTTTAACGAT-AAAATTGTGTCTTCGCTCTCCACTTCCACGGT 34667 |||||| ||||| || || ||| | ||| ||||| ||| || || | ||| Sbjct 36149 TTGTCTTGAATCTTCTG-CTTGACGTTGTCAATGGTGTCCGAAGACTCGACCTCGAGGGT 36207 Query 34668 TATCGTTTTACCGGTTAACGTTTTCACAAAAATCTGCATG 34707 || || || ||||| | || || || |||||||||||| Sbjct 36208 GATGGTCTTGCCGGTAAGGGTCTTGACGAAAATCTGCATG 36247 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 314722074225146