Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mortierella_20alpina_20[genbank_20GCA_5F001021685.1_202015-06-08] 1,962 sequences; 36,305,198 total letters Query= NC_028636.1 Length=135952 Score E Sequences producing significant alignments: (Bits) Value seq1237 138 1e-27 seq1899 134 1e-26 >seq1237 Length=85294 Score = 138 bits (152), Expect = 1e-27 Identities = 171/234 (73%), Gaps = 0/234 (0%) Strand=Plus/Minus Query 26984 CGCCATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACC 27043 |||||||||||| || || || || || ||||||||| | || || || || || || | Sbjct 36250 CGCCATGCAGATTTTCGTCAAGACCCTTACCGGCAAGACCATCACCCTCGAGGTCGAGTC 36191 Query 27044 GTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGA 27103 || ||| | ||||| | ||||| || || ||||||||||| || || || || || || Sbjct 36190 TTCGGACACCATTGACAACGTCAAGCAGAAGATTCAAGACAAGGAGGGTATCCCTCCAGA 36131 Query 27104 TCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTA 27163 || |||||| | || | ||||||||| || | || ||| | ||| | || || || Sbjct 36130 CCAGCAGCGTCTCATCTTCGCCGGCAAGCAGCTCGAGGACGGCCGTACCCTCTCTGACTA 36071 Query 27164 CAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGCAT 27217 ||| ||||| |||||||||||| | || ||||| | ||| | || ||||| || Sbjct 36070 CAATATTCAGAAGGAGTCGACCCTTCACTTGGTCCTCCGTCTCCGTGGTGGTAT 36017 Score = 122 bits (134), Expect = 8e-23 Identities = 163/227 (72%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 26988 ATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTCC 27047 |||||||| || || || || ||||||||||| | || || | || ||||| | || Sbjct 35711 ATGCAGATTTTCGTCAAGACCTTGACCGGCAAGACCATCACGTTGGAGGTGGAGTCTTCG 35652 Query 27048 GACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCAA 27107 ||| | ||||| | ||||| || || || |||||||| || ||||| || || || || Sbjct 35651 GACACCATTGACAATGTCAAGCAGAAGATCCAAGACAAGGAGGGCATTCCCCCAGACCAG 35592 Query 27108 CAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAAC 27167 |||||| | || | |||||||| || | || ||| | ||| | || || ||||| Sbjct 35591 CAGCGTCTCATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGTACCCTCTCTGACTACAAT 35532 Query 27168 ATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGG 27214 || || |||||||||||| | || ||||| | ||| | || ||||| Sbjct 35531 ATCCAGAAGGAGTCGACCCTTCACTTGGTCCTCCGTCTCCGTGGTGG 35485 Score = 87.8 bits (96), Expect = 2e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 27027 ACTCTTGAAGTGGAACCGTCCGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAA 27086 || || || || || |||| ||| | || || | ||||| || || || ||||| || Sbjct 35900 ACCCTCGAGGTCGAGTCGTCGGACACCATCGACAACGTCAAGCAGAAGATCCAAGATAAG 35841 Query 27087 GAAGGCATACCACCCGATCAACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGT 27146 || || || || || || || |||||| | || | |||||||| || | || ||| | Sbjct 35840 GAGGGTATCCCCCCAGACCAGCAGCGTCTCATCTTTGCCGGCAAGCAGCTTGAGGACGGC 35781 Query 27147 TCGACCGTTTCCGATTACAACATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTG 27206 ||| | || || |||||||| || |||||||||||| | || ||||| | ||| | Sbjct 35780 CGTACCCTCTCTGACTACAACATCCAGAAGGAGTCGACCCTTCACTTGGTCCTCCGTCTC 35721 Query 27207 CGGGGTGGCAT 27217 || ||||| || Sbjct 35720 CGTGGTGGTAT 35710 >seq1899 Length=11869 Score = 134 bits (148), Expect = 1e-26 Identities = 167/229 (73%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 26987 CATGCAGATATTTGTAAAAACTCTGACCGGCAAGTCTATTACTCTTGAAGTGGAACCGTC 27046 ||||||||| || || || || ||||| || ||| | || || || || || || |||| Sbjct 5714 CATGCAGATTTTCGTCAAGACCCTGACTGGTAAGACCATCACCCTCGAGGTCGAGTCGTC 5655 Query 27047 CGACTCGATTGAGATGGTCAAACAAAAAATTCAAGACAAAGAAGGCATACCACCCGATCA 27106 ||| | || || | ||||| || || ||||| ||||| || ||||| || || || || Sbjct 5654 CGATACCATCGATAACGTCAAGCAGAAGATTCAGGACAAGGAGGGCATCCCCCCAGACCA 5595 Query 27107 ACAGCGTTTAATATACGCCGGCAAACAATTGGAAGACAGTTCGACCGTTTCCGATTACAA 27166 |||||| | || | |||||||| || | || ||| | ||| | || |||||||| Sbjct 5594 GCAGCGTCTCATCTTTGCCGGCAAGCAGCTCGAGGACGGCCGTACCCTCTCTGATTACAA 5535 Query 27167 CATTCAAAAGGAGTCGACCTTACATTTGGTTTTGCGTTTGCGGGGTGGC 27215 ||| || |||||||||||| | |||||||| | ||| | || |||||| Sbjct 5534 CATCCAGAAGGAGTCGACCCTCCATTTGGTCCTCCGTCTTCGTGGTGGC 5486 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 434907733626240