Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mortierella_20alpina_20[genbank_20GCA_5F001021685.1_202015-06-08] 1,962 sequences; 36,305,198 total letters Query= NC_029692.1 Length=362276 Score E Sequences producing significant alignments: (Bits) Value seq1899 152 1e-31 seq1237 149 1e-30 seq1939 114 3e-20 seq1254 98.7 2e-15 seq1584 93.3 1e-13 >seq1899 Length=11869 Score = 152 bits (168), Expect = 1e-31 Identities = 167/222 (75%), Gaps = 0/222 (0%) Strand=Plus/Plus Query 210893 ACGAAGTCTTAGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGT 210952 |||||| | ||||| | || || || ||||| || |||||||| ||||| | ||||| Sbjct 5492 ACGAAGACGGAGGACCAAATGGAGGGTCGACTCCTTCTGGATGTTGTAATCAGAGAGGGT 5551 Query 210953 CCTTCCATCTTCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCC 211012 | || || || ||||||||||| || ||||| || || || ||||| || || | || Sbjct 5552 ACGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGGGGGATGCC 5611 Query 211013 TTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAG 211072 ||||||||||| ||||| || || ||||| |||||||| || || || |||||||| Sbjct 5612 CTCCTTGTCCTGAATCTTCTGCTTGACGTTATCGATGGTATCGGACGACTCGACCTCGAG 5671 Query 211073 AGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 ||||| ||||| || || || ||||| || || | |||||| Sbjct 5672 GGTGATGGTCTTACCAGTCAGGGTCTTGACGAAAATCTGCAT 5713 Score = 145 bits (160), Expect = 2e-29 Identities = 137/175 (78%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||||||||||||||| || |||||||| || |||| ||||| | || || Sbjct 5730 AGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCC 5789 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| ||||| || ||||| || || | || ||||| || Sbjct 5790 TCAAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCTGGGGGGATACCCTCCTTATCT 5849 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGA 211077 |||||||| || || ||||| ||||||||||| || || |||||||| |||| Sbjct 5850 TGGATCTTCTGCTTGACGTTGTCGATGGTGTCCGACGACTCGACCTCGAGGGTGA 5904 Score = 89.7 bits (98), Expect = 1e-12 Identities = 82/104 (79%), Gaps = 0/104 (0%) Strand=Plus/Plus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 || ||||| || |||||||| || || ||||| ||||||||||| || || |||||| Sbjct 5917 CCCTCCTTATCTTGGATCTTCTGCTTGACGTTGTCGATGGTGTCCGACGACTCGACCTCG 5976 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || ||||| ||||| || ||||| ||||| ||||| | ||||| Sbjct 5977 AGGGTGATGGTCTTGCCGGTGAGGGTCTTGACAAAGATTTGCAT 6020 >seq1237 Length=85294 Score = 149 bits (164), Expect = 1e-30 Identities = 160/212 (75%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | |||||| || ||||| || || || || || || | ||||| | || || Sbjct 36035 AGGACCAAGTGAAGGGTCGACTCCTTCTGAATATTGTAGTCAGAGAGGGTACGGCCGTCC 36094 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| |||||||| || || || ||||| ||||| | || |||||||| Sbjct 36095 TCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGAGGGATACCCTCCTTGTCT 36154 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 || ||||| || || ||||| || |||||||| || || |||||||| ||||| ||| Sbjct 36155 TGAATCTTCTGCTTGACGTTGTCAATGGTGTCCGAAGACTCGACCTCGAGGGTGATGGTC 36214 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || || ||||| || || | |||||| Sbjct 36215 TTGCCGGTAAGGGTCTTGACGAAAATCTGCAT 36246 Score = 134 bits (148), Expect = 3e-26 Identities = 157/212 (74%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | |||||| || ||||| || ||||| || || || | ||||| | || || Sbjct 35500 AGGACCAAGTGAAGGGTCGACTCCTTCTGGATATTGTAGTCAGAGAGGGTACGGCCGTCC 35559 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| || || || ||||| || |||| || |||||||| Sbjct 35560 TCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCT 35619 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGATCGTC 211082 |||||||| || || || || || |||||||| || || ||||| | ||||| ||| Sbjct 35620 TGGATCTTCTGCTTGACATTGTCAATGGTGTCCGAAGACTCCACCTCCAACGTGATGGTC 35679 Query 211083 TTTCCCGTGAGAGTCTTTACAAACACCTGCAT 211114 || || || | ||||| || || | |||||| Sbjct 35680 TTGCCGGTCAAGGTCTTGACGAAAATCTGCAT 35711 Score = 127 bits (140), Expect = 5e-24 Identities = 133/175 (76%), Gaps = 0/175 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | |||||| || ||||| || |||||||| || || | ||||| | || || Sbjct 35728 AGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTACGGCCGTCC 35787 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAACTCCTTCCTTGTCC 211022 || ||||||||||| || ||||| || || || ||||| || || | || ||||| || Sbjct 35788 TCAAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGGGGGATACCCTCCTTATCT 35847 Query 211023 TGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCGAGAGTGA 211077 |||||||| || || ||||| ||||||||||| || || |||||||| |||| Sbjct 35848 TGGATCTTCTGCTTGACGTTGTCGATGGTGTCCGACGACTCGACCTCGAGGGTGA 35902 >seq1939 Length=69097 Score = 114 bits (126), Expect = 3e-20 Identities = 198/284 (70%), Gaps = 8/284 (3%) Strand=Plus/Plus Query 178086 TTCCAAAGTTCTTTTGGTTGCTCTTTC---TGCAAATGGCATCTTTGTACGCAATGAAGG 178142 |||| ||||| | |||||| ||| | |||| |||||| ||||| || ||| Sbjct 2051 TTCCCAAGTTTTGCTGGTTGGACTTGCGGTTGCA---GGCATCCTTGTAAAGCATATAGG 2107 Query 178143 GCATTCCCACCTCAGCTTGAGCCACGAGAATGTGATGCCAAAGCTCCTGGGCTCGGACAG 178202 || ||||| ||| | ||| ||| | | ||| || ||| | || || || || || Sbjct 2108 GCGTTCCCGTCTCGGTTTGCGCCTCCAAAATCGCATACCACAACTTTTGAGCCTTGATAG 2167 Query 178203 TCTTTTTGGCTTTTCCTTCATTCTCGTACTTTTTGTAGAGCTCCTCGAATTCCGGTCCAT 178262 ||||| ||| || || ||||||||| | |||||||||||| || ||| || Sbjct 2168 TCTTTCGGGCGCGACCCTCCTTCTCGTACCGGTGGTAGAGCTCCTCAAACTCCTCGCCCC 2227 Query 178263 AGACATCATCGAGACCGGGAGCCTCATTGGGGCAGAAGAGACTCCACTGACCGTCTTCCT 178322 | ||||| | || ||||| |||||| |||||||| |||||||| | || | || || Sbjct 2228 AAACATCTTGAAGGCCGGGGGCCTCAGCAGGGCAGAACAGACTCCAGTCTCCAT-TTTCT 2286 Query 178323 TCACT-CGTTTCATGAAGAGGTCAGAGGTCCAGATGGCATAGAA 178365 ||| | || |||||||| || || | | |||||| ||||||||| Sbjct 2287 TCAATGCGCTTCATGAACAGATCGGGGATCCAGAGGGCATAGAA 2330 >seq1254 Length=67957 Score = 98.7 bits (108), Expect = 2e-15 Identities = 86/107 (80%), Gaps = 0/107 (0%) Strand=Plus/Minus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 || ||||||||||||||||| || || ||||| || |||||||| || || |||||| Sbjct 2861 CCCTCCTTGTCCTGGATCTTCTGCTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCG 2802 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || ||||| |||||||| || || ||||| || || | ||||||||| Sbjct 2801 AGGGTGATGGTCTTTCCGGTAAGGGTCTTAACGAAAATCTGCATTTT 2755 Score = 87.8 bits (96), Expect = 4e-12 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | ||| || || ||||| || |||||||| || |||| || || | ||||| Sbjct 3372 AGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAGAGAGTGCGGCCATCC 3313 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAA 211008 || ||||||||||| |||||||| ||||| || ||||| || |||| Sbjct 3312 TCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCTGGGGGAA 3267 >seq1584 Length=118991 Score = 93.3 bits (102), Expect = 1e-13 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 210903 AGGACAAGGTGAAGAGTGGACTCTTTTTGGATGTTATAATCCGCAAGGGTCCTTCCATCT 210962 ||||| | |||||| || ||||| || |||||||| ||||||| || || | ||||| Sbjct 13658 AGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGGCCATCC 13717 Query 210963 TCCAGCTGCTTGCCTGCGAAGATAAGGCGTTGTTGGTCAGGAGGAA 211008 || ||||||||||| || ||||| ||||| || ||||| || |||| Sbjct 13718 TCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCTGGGGGAA 13763 Score = 89.7 bits (98), Expect = 1e-12 Identities = 84/107 (79%), Gaps = 0/107 (0%) Strand=Plus/Plus Query 211011 CCTTCCTTGTCCTGGATCTTTTGTTTCACGTTTTCGATGGTGTCAGAGCTTTCAACCTCG 211070 || |||||||||||||||||| || ||||| || |||||||| || || ||||| Sbjct 14253 CCCTCCTTGTCCTGGATCTTTGCCTTGACGTTGTCAATGGTGTCGGAAGACTCCACCTCA 14312 Query 211071 AGAGTGATCGTCTTTCCCGTGAGAGTCTTTACAAACACCTGCATTTT 211117 || ||||| |||||||| || || ||||| || || | ||||||||| Sbjct 14313 AGGGTGATGGTCTTTCCGGTAAGGGTCTTAACGAAAATCTGCATTTT 14359 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1159122861092130