Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mortierella_20alpina_20[genbank_20GCA_5F001021685.1_202015-06-08] 1,962 sequences; 36,305,198 total letters Query= NC_030656.1 Length=133492 Score E Sequences producing significant alignments: (Bits) Value seq1263 118 9e-22 >seq1263 Length=39644 Score = 118 bits (130), Expect = 9e-22 Identities = 179/254 (70%), Gaps = 3/254 (1%) Strand=Plus/Plus Query 4842 TACATTTCAGAATGTATATTTTCTATAGCAATCTGAAATCCGTAAAAGCATCTAGCTTCT 4901 ||||| ||||| || | ||| || || ||||| ||||||||||||||||| || ||| Sbjct 13517 TACATCTCAGAGTGGACATTCTCAATCATGATCTGGAATCCGTAAAAGCATCTTGCCTCT 13576 Query 4902 GTTACTTGAACTTCGTTACAAAATCTTTCTACTAAGTTTTCGTTTACTATACCGTCACTG 4961 | | || || ||||| | |||| || | ||||| ||||| || || ||||||||| Sbjct 13577 GGGATCTGGACCTCGTTCGAGAATCGCTCAAGCAAGTTCTCGTTGACAATGCCGTCACTG 13636 Query 4962 GCTGCAAAAAACGCCAAAACATGAGATATAAAGTA---CTGTTCGTCAGGCTTAAGTTTT 5018 || || || || |||| | || || | |||| | || ||| ||| | | | || Sbjct 13637 GCAGCGAAGAAAGCCAGGATGTGCGAGACAAAGAATCGCTCGTCGGCAGACATGCGGTTC 13696 Query 5019 TTCCAGTGGGGCAAATCTTTAGTTAAATCAACTTCTTCAACAGTCCAAAACGACGCTTCC 5078 | ||||| | ||| || || | | ||| || |||||| ||||||| || || || || Sbjct 13697 TCCCAGTCGTGCATGTCCTTGGAGAGATCGACCTCTTCAGCAGTCCAGAAGGAGGCCTCA 13756 Query 5079 GCTTTTTTGTACAT 5092 || || |||||||| Sbjct 13757 GCCTTCTTGTACAT 13770 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 427039388443346