Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mortierella_20alpina_20[genbank_20GCA_5F001021685.1_202015-06-08] 1,962 sequences; 36,305,198 total letters Query= NC_030842.1 Length=115510 Score E Sequences producing significant alignments: (Bits) Value seq1303 96.9 3e-15 seq1135 82.4 6e-11 >seq1303 Length=68252 Score = 96.9 bits (106), Expect = 3e-15 Identities = 161/233 (69%), Gaps = 0/233 (0%) Strand=Plus/Minus Query 27493 TCCGTGTACTCTGCTCCGAAATGCCTCCATTGGAACCCGTACACCGGTCCCAGGTCTCCC 27552 ||| ||||||||||||| || || | ||| ||||| ||||| || || || |||||||| Sbjct 37512 TCCTTGTACTCTGCTCCAAAGTGGCGCCACTGGAAGCCGTAGACGGGGCCGAGGTCTCCG 37453 Query 27553 TCTTCCCTGTGCTCGAAGCCCCTCTTGTCCAAAAAGTCTCTGGAACCGTTGGCGTCCCAG 27612 | | | || | ||| |||||||| | |||||||| || || | ||||| Sbjct 37452 ACCTTGCGATGGGACAGGCCGACCTTGTCCAGGTACTCTCTGGAGCCATTTCCTTCCCAT 37393 Query 27613 ATCTTTACCCCCTTCTCGGAGAGCTCTTTGGAGTTTGTGGACCCTCTGACGAACCACAGC 27672 ||||| || || ||||| || || | | ||| ||| ||| |||||||||| || Sbjct 37392 ATCTTGACGCCTTTCTCAGAAAGATGGAGGCCGTTAGTGTCGCCTTTGACGAACCAGAGG 37333 Query 27673 AGCTCCTCCACGACGGCCTTCCAAAAGACCCTCTTGGTCGTGAGGAGGGGAAA 27725 || ||||| | || || | ||| || | |||||| || | ||| ||||| Sbjct 37332 AGTTCCTCAATCACAGCTCTGAGAAAAACTCGCTTGGTAGTCAAGAGAGGAAA 37280 >seq1135 Length=117068 Score = 82.4 bits (90), Expect = 6e-11 Identities = 109/146 (75%), Gaps = 8/146 (5%) Strand=Plus/Minus Query 48545 AGATGGGTGACAAGTTTGCGTC-CTTCACGGCGCAAAAGGGGACATGTGGAGC-CGTCCT 48602 ||||||| |||||||||||||| | |||||| |||||| ||| | | | ||| | Sbjct 53560 AGATGGGAGACAAGTTTGCGTCTCGTCACGGACAAAAAGGAACCATTGGTATCACGTACA 53501 Query 48603 GACCCAGGAGGACATGCCCTT--CGACAAGGACGGGGTGGTGCCCGACCTCATCATCAAC 48660 ||| |||||||||||||||| || | ||| || | ||||||| | ||||||||| Sbjct 53500 GAC--AGGAGGACATGCCCTTTACGTC--GGAGGGTATCACGCCCGACATTATCATCAAC 53445 Query 48661 CCCCACGCCTTTCCCTCCAGGATGAC 48686 || |||||| |||| || | ||||| Sbjct 53444 CCTCACGCCATTCCGTCTCGTATGAC 53419 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 369498364390022