Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mortierella_20alpina_20[genbank_20GCA_5F001021685.1_202015-06-08] 1,962 sequences; 36,305,198 total letters Query= NC_031033.1 Length=217124 Score E Sequences producing significant alignments: (Bits) Value seq1939 206 4e-48 seq1221 152 7e-32 seq1263 125 1e-23 seq1142 114 2e-20 >seq1939 Length=69097 Score = 206 bits (228), Expect = 4e-48 Identities = 478/716 (67%), Gaps = 6/716 (1%) Strand=Plus/Plus Query 77925 TCAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGAC 77984 ||||| || || ||||||||||| | | || ||| ||| ||||| | || | Sbjct 2212 TCAAACTCCTCGCCCCAAACATCTTGAAGGCCGGGGGCCTCAGCAGGGCAGAACAGACTC 2271 Query 77985 CAGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAAT 78044 ||||| |||| ||| | || || ||||| || ||||| || ||||| || ||| || Sbjct 2272 CAGTCTCCATTTTCTTCAATGCGCTTCATGAACAGATCGGGGATCCAGAGGGCATAGAAC 2331 Query 78045 AGATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATA 78104 ||||| |||| | ||||| ||||| || ||||| ||| || | |||||| | Sbjct 2332 AGATCACGGGCACGGGACTCTTCCTTTCCAGTGTTCTTGCGAAGGTCCAAAAACTCAAAG 2391 Query 78105 ATATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCC 78164 | || | ||||| || || || || || || | | || || || || || || ||| Sbjct 2392 ACGTCTGCGTGCCAAGGCTCGAGGTACATGGCGAACGCACCTGGGCGCTTGTTGCCACCC 2451 Query 78165 TGATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGAT 78224 ||||| | ||| | ||| ||||| || || || | | ||| ||||||| || || || Sbjct 2452 TGATCGACATAACGGGCAGTGTTGTTGTACACGCGAAGCATAGGAATAAGGCCATTGGAG 2511 Query 78225 GTTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCT 78284 ||| || ||||||| ||| || ||| |||||||| || |||| | || Sbjct 2512 TATCCGTTGGTTCCAGCAATGTATGATCCCGAGGCGCGAATGTTGTGAATGTTCAGACCG 2571 Query 78285 ATTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCT 78344 |||||||| ||| |||| || || | ||||| ||||| || || ||||||||||| Sbjct 2572 ATTCCTCCAGCCGTCTTGGAGATCATGGCGCAGGTCTTCAACGTGTCATAGATACCCTCG 2631 Query 78345 ATACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCT 78404 || || ||| ||||| | || | || ||||| ||||| || | ||||| Sbjct 2632 ATCGAATCGTCCTTCATGGTCAGCAAGAAGCAGCTCGACATCTGGGGTCTGGGGGTTCCG 2691 Query 78405 GCATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGA-AAGTAGATTGTATGT 78463 || ||||| | || || || ||||| || || | ||||| || | |||| ||||| || Sbjct 2692 GCGTTAAAGAGAGTGGGCGAAGCATGAGTGAAGAACTTTTCCGACATGTAG-TTGTAGGT 2750 Query 78464 TTCAATAGCTGATTCTATGTCCCATTG--ATGAATTCCTACCGCTACACGCATCAACATA 78521 || ||||| |||| ||| | || ||||| || | ||||||||||||||| Sbjct 2751 CTCGATAGC--CTTCTCGACATCATCGCCGTGGATTCCGACAGAGACACGCATCAACATA 2808 Query 78522 TGCTGAGGTCTTTCAACCGTCTTATTATTTATTTTCAACAAGTATGATTTTTCCAAAGTT 78581 ||||||||||| || | ||| | || | || ||| || ||||| || Sbjct 2809 TGCTGAGGTCTCTCTGCGACCTTGCCGTCGATGCGGAGCAGGTACGAGCGCTCCAAGGTC 2868 Query 78582 TTAAAACCAAAATAGTTGTATGAAAAGTCTCTCTCGTAAATAATAACAGAATTTAG 78637 || || ||||| |||||||| ||||| | ||||| || || |||| || || Sbjct 2869 TTGAATCCAAAGTAGTTGTAGTTGAAGTCGCGGTCGTAGATGATGGCAGAGTTCAG 2924 >seq1221 Length=39966 Score = 152 bits (168), Expect = 7e-32 Identities = 549/853 (64%), Gaps = 18/853 (2%) Strand=Plus/Minus Query 77688 GCTAGATTACAAACTGCTACCTCATTAGCGTTGGCATATTGTATTATCTCGGTACATAGA 77747 || |||||||| || || ||||| | | | || || | || ||||| || || || Sbjct 35140 GCCAGATTACAGACCGCCACCTCTTCGGGGCTGCTGTACTCGATGATCTCAGTGCACAGG 35081 Query 77748 TTACTACATTTGATAGTGCCCAGATTTTGTTGGTTGCTCTTTTTATTGCATGAGTCCTTA 77807 || || ||||| ||||||||||| || |||||| || |||||| | |||||| Sbjct 35080 TTCGAGCACTTGATGGTGCCCAGATTCTGCTGGTTGGATTTACGATTGCAGGCGTCCTTG 35021 Query 77808 TAAAGAATAAACGGAGTCCCGGTTTCAATCTGTGATTCGATAATAGATTTCCAGACGACT 77867 ||||| || | || |||||||| || |||| || |||| || | ||| | | Sbjct 35020 TAAAGCATGTAAGGGGTCCCGGTCTCGGTCTGCGACTCGAGGATCGCGAACCACAGCTTT 34961 Query 77868 CTAGCTTTTATCATAGATTTGTA--TCGCCTCTCTCTTTCATATTGAGTATATAGCCGTT 77925 || || ||| | ||| | ||| | |||| ||| ||| | || || | Sbjct 34960 TGGGCCTTGATCGTC--TTTCGAGCTCGACCCTCTTGTTCGTATCGGTGGTAGAGGTCCT 34903 Query 77926 CAAATTCATCTCCCCAAACATCATCCAATCCAGGGCATTCATTTGGGCACATCAATGACC 77985 | || | || ||||| || || | | || || || || || | | |||| Sbjct 34902 CGAACTGGTCCCCCCAGACGTCTTGAAGGCCCGGTGCCTCTGCAGGACAGAAGAGGGACC 34843 Query 77986 AGTCACCATCTTCCTTAACTCGTTTCATAAAGAGATCAGGTATCCATAGAGCAATAAATA 78045 ||||||| | ||| | | ||| ||| || |||||||| ||||| || |||| || | Sbjct 34842 AGTCACCGTTTTCTTCGATGCGTCGCATGAACAGATCAGGGATCCACAGCGCAAAGAACA 34783 Query 78046 GATCTCGGGTTCTATGTTCTTCATTTCCTGTATTCTTTTTAAGATCGAGAAACTCCATAA 78105 |||| |||| | ||||| || || || ||||| || || || || || | | Sbjct 34782 GATCACGGGCGCGGGTCTCTTCCTTGCCCGTGTTCTTGCGCAGGTCCAGGAAATCAAAGA 34723 Query 78106 TATCAGAATGCCATGGTTCTAGATATATTGCCATAACTCCAGGTCGTTTATTACCTCCCT 78165 ||| | |||||| || || || || || || | | || ||||| || || || || | Sbjct 34722 CATCGGCATGCCACGGCTCGAGGTACATGGCAAAGGCACCCGGTCGCTTGTTGCCACCTT 34663 Query 78166 GATCTATATATCTGGCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATG 78225 |||| | ||| | || ||||| || | || |||| ||| || || | ||| || || Sbjct 34662 GATCCACATACCGAGCCGTGTTGTTGAAGACCCTCAGCATGGGGATCAGACCATTCGAGT 34603 Query 78226 TTCCATTTGTTCCAGAAATATAACTTCCACTTGCGCGAATATTACTAATGGATATCCCTA 78285 || || || || | || || ||| || || || || ||| | || | Sbjct 34602 AGCCGTTCGTGCCGGCGATGTAGGATCCGGACGCACGGATGTTGTGGATGTTGAGACCAA 34543 Query 78286 TTCCTCCTGCCATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTA 78345 | ||||| ||| |||| || || | || || || | ||||||||||| ||||| | Sbjct 34542 TGCCTCCGGCCGTCTTGGAGATCATGGCACAGGTCTTGAGGGTATCGTAGATCCCCTCGA 34483 Query 78346 TACTGTCATCCATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTG 78405 | ||| ||| |||| | || || |||||||| |||||||| | | || || | Sbjct 34482 TCGAGTCGTCCTTCATAGTGAGGAGGAAACAGCTGGACATTTGTGGCCGGGGCGTGCCGG 34423 Query 78406 CATTAAATAATGTCGGAGATGCATGCGTAAACCATTTTTCAGA-AAGTAGATTGTATGTT 78464 |||| || | ||||| || ||||| || || ||||||| || | |||| ||||| || Sbjct 34422 CATTGAACAGCGTCGGGGACGCATGGGTGAAGAATTTTTCGGACATGTAG-TTGTAGGTC 34364 Query 78465 TCAATAGCTGATTCTATGT------CCCATTGATGAATTCCTACCGCTACACGCATCAAC 78518 || || || || | || |||| |||| || || || || ||||||| | Sbjct 34363 TCGATGGCCTTGTCGACGTTCTGACCCCA--GATG----CCGACGGCGACGCGCATCAGC 34310 Query 78519 ATATGCTGAGGTC 78531 | ||||||||||| Sbjct 34309 AGATGCTGAGGTC 34297 >seq1263 Length=39644 Score = 125 bits (138), Expect = 1e-23 Identities = 202/290 (70%), Gaps = 3/290 (1%) Strand=Plus/Plus Query 48402 TCTTTAACGTAAGTATCTATTAAAAGACTATACATTTCGGAGTGAATATTTTCAATTGCC 48461 || || ||||| || || || || || ||||| || ||||| | ||| ||||| Sbjct 13487 TCCTTGACGTATGTGTCAATCAAGAGCGAGTACATCTCAGAGTGGACATTCTCAATCATG 13546 Query 48462 ATCTGAAATCCGTAAAAACATCTCGCTTCTGTGATCTGTACCTCCGTACAAAATCGTTCA 48521 ||||| ||||||||||| ||||| || |||| |||||| ||||| | | ||||| ||| Sbjct 13547 ATCTGGAATCCGTAAAAGCATCTTGCCTCTGGGATCTGGACCTCGTTCGAGAATCGCTCA 13606 Query 48522 GCCAAATTCTCATTTACTATTCCATCACTAGCAGCAAAAAATGCTAATACATGTTTAATA 48581 ||| ||||| || || || || ||||| ||||| || || || | | || | | Sbjct 13607 AGCAAGTTCTCGTTGACAATGCCGTCACTGGCAGCGAAGAAAGCCAGGATGTGCGAGACA 13666 Query 48582 AAATATTTTTCGTTGGAAGTCA---GTTTATTCCAGTCATTGATATCTTTTGATATATCT 48638 || || |||| || || || | || | |||||| | || || || || | ||| Sbjct 13667 AAGAATCGCTCGTCGGCAGACATGCGGTTCTCCCAGTCGTGCATGTCCTTGGAGAGATCG 13726 Query 48639 ACTTCTTCAGCTGTCCAAAATGATGCCTCTGCTTTTTTATACATATTCCA 48688 || |||||||| ||||| || || ||||| || || || ||||| | ||| Sbjct 13727 ACCTCTTCAGCAGTCCAGAAGGAGGCCTCAGCCTTCTTGTACATCTGCCA 13776 >seq1142 Length=49763 Score = 114 bits (126), Expect = 2e-20 Identities = 239/354 (68%), Gaps = 8/354 (2%) Strand=Plus/Minus Query 78180 GCGGTGTTATTATAAACTCTCAACATTGGAATAATACCGTTAGATGTTCCATTTGTTCCA 78239 || |||| |||| | || | || ||| || || |||||||| || ||||||| |||||| Sbjct 35762 GCAGTGTCATTAAAGACGCGCAGCATGGGGATGATACCGTTCGAGTTTCCATTCGTTCCA 35703 Query 78240 GAAATATAACTTCCACTTGCGCGAATATTACTAATGGA---TATC-CCTATTCCTCCTGC 78295 | ||| ||| || || ||||| || |||| || | || | || || || Sbjct 35702 GCAATGTAAGAGCCTGAGGCACGAATTTTT----TGGAAACTAACGCCAACACCGCCGGC 35647 Query 78296 CATCTTAGATATTAGAGCGCAACGTTTCAATGTATCGTAGATACCCTCTATACTGTCATC 78355 ||| || || | | ||| |||| || |||||||||||||| ||||| || || Sbjct 35646 TGACTTTGAGATCAAGGAGCAGGTCTTCAGAGTGTCGTAGATACCCTCGATACTATCGTC 35587 Query 78356 CATCATGTTAAGAAGAAAACAGCTAGACATTTGATGATGAACAGTTCCTGCATTAAATAA 78415 ||| | | ||| ||||| || ||||| || || | |||||| ||||| || | Sbjct 35586 TTGCATCTGGACAAGGAAACAACTCGACATCTGGGGACGCGGAGTTCCAGCATTGAACAG 35527 Query 78416 TGTCGGAGATGCATGCGTAAACCATTTTTCAGAAAGTAGATTGTATGTTTCAATAGCTGA 78475 |||||| | || ||||| || | || ||||| | | | |||||| |||||||| | Sbjct 35526 TGTCGGGGTAGCGTGCGTGAAGTACTTCTCAGACATGAAGTGGTATGTCTCAATAGCAGC 35467 Query 78476 TTCTATGTCCCATTGATGAATTCCTACCGCTACACGCATCAACATATGCTGAGG 78529 || ||||| | | || || || | || || | ||| | |||||||||||| Sbjct 35466 CTCAATGTCGCGTCCGTGGATGCCGATCGAAACTCTCATAATCATATGCTGAGG 35413 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 694651763247680