Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mortierella_20alpina_20[genbank_20GCA_5F001021685.1_202015-06-08] 1,962 sequences; 36,305,198 total letters Query= NC_032255.1 Length=112536 Score E Sequences producing significant alignments: (Bits) Value seq1237 136 3e-27 seq1899 132 3e-26 seq1584 87.8 1e-12 >seq1237 Length=85294 Score = 136 bits (150), Expect = 3e-27 Identities = 158/211 (75%), Gaps = 4/211 (2%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| |||||| || |||||| ||||| ||||| || | ||| || |||| || Sbjct 35503 ACCAAGTGAAGGGTCGACTCCTTCTGGATATTGTAGTCAGAGAGGGTACGGCCGTCCTCG 35562 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||||||||| | ||||||||| |||| || | || ||||| || Sbjct 35563 AGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGGGGAATGCCCTCCTTGTCTTGG 35622 Query 44249 ATCTTCTGCTT--CAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCT 44306 ||||||||||| || ||| | |||||||| | || |||||||||| ||| || |||| Sbjct 35623 ATCTTCTGCTTGACATTGT--CAATGGTGTCCGAAGACTCCACCTCCAACGTGATGGTCT 35680 Query 44307 TTCCCGTGAGGGTCTTCACGAAGATTTGCAT 44337 | || || | |||||| ||||| || ||||| Sbjct 35681 TGCCGGTCAAGGTCTTGACGAAAATCTGCAT 35711 Score = 127 bits (140), Expect = 1e-24 Identities = 154/210 (73%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| |||||| || |||||| || || ||||| || | ||| || |||| || Sbjct 36038 ACCAAGTGAAGGGTCGACTCCTTCTGAATATTGTAGTCAGAGAGGGTACGGCCGTCCTCG 36097 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||| ||||| | ||||||||| |||| ||| | ||| ||||| || Sbjct 36098 AGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGAGGGATACCCTCCTTGTCTTGA 36157 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTT 44308 ||||||||||| | | | |||||||| | || || ||||| | || || ||||| Sbjct 36158 ATCTTCTGCTTGACGTTGTCAATGGTGTCCGAAGACTCGACCTCGAGGGTGATGGTCTTG 36217 Query 44309 CCCGTGAGGGTCTTCACGAAGATTTGCATG 44338 || || |||||||| ||||| || |||||| Sbjct 36218 CCGGTAAGGGTCTTGACGAAAATCTGCATG 36247 Score = 102 bits (112), Expect = 6e-17 Identities = 121/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| |||||| || |||||| ||||||||||| || | ||| || |||| || Sbjct 35731 ACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAGAGGGTACGGCCGTCCTCA 35790 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||||||||| | ||||||||| |||| || | ||| ||||| || Sbjct 35791 AGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGGGGGATACCCTCCTTATCTTGG 35850 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTC 44292 ||||||||||| | | | |||||||| | || || ||||| Sbjct 35851 ATCTTCTGCTTGACGTTGTCGATGGTGTCCGACGACTCGACCTC 35894 >seq1899 Length=11869 Score = 132 bits (146), Expect = 3e-26 Identities = 145/193 (75%), Gaps = 0/193 (0%) Strand=Plus/Plus Query 44146 CTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCCAGCTGCTTCCCGGCAAA 44205 |||||| |||||||||||||| | ||| || |||| || |||||||| |||||||| Sbjct 5522 CTCCTTCTGGATGTTGTAATCAGAGAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCAAA 5581 Query 44206 GATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTTATCTTCTGCTTCAATGT 44265 ||| | ||||||||| |||| || | || ||||| ||| ||||||||||| | | Sbjct 5582 GATGAGACGCTGCTGGTCTGGGGGGATGCCCTCCTTGTCCTGAATCTTCTGCTTGACGTT 5641 Query 44266 TCCTATGGTGTCGGCGGATTCCACCTCCACCGTAATCGTCTTTCCCGTGAGGGTCTTCAC 44325 | ||||| |||| || || ||||| | || || ||||| || || |||||||| || Sbjct 5642 ATCGATGGTATCGGACGACTCGACCTCGAGGGTGATGGTCTTACCAGTCAGGGTCTTGAC 5701 Query 44326 GAAGATTTGCATG 44338 ||| || |||||| Sbjct 5702 GAAAATCTGCATG 5714 Score = 107 bits (118), Expect = 1e-18 Identities = 122/164 (74%), Gaps = 0/164 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| |||||| ||| |||||| ||||||||||| || | ||| ||| |||| || Sbjct 5733 ACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGAGAGGGTGCGGCCGTCCTCA 5792 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCTTCCTTTTCCGTT 44248 |||||||| ||||||||||| | |||||||| |||| || | ||| ||||| || Sbjct 5793 AGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCTGGGGGGATACCCTCCTTATCTTGG 5852 Query 44249 ATCTTCTGCTTCAATGTTCCTATGGTGTCGGCGGATTCCACCTC 44292 ||||||||||| | | | |||||||| | || || ||||| Sbjct 5853 ATCTTCTGCTTGACGTTGTCGATGGTGTCCGACGACTCGACCTC 5896 >seq1584 Length=118991 Score = 87.8 bits (96), Expect = 1e-12 Identities = 84/108 (78%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 44129 ACCAGGTGAAGCGTGCTCTCCTTTTGGATGTTGTAATCGGCGAGTTGGCGCTCGTCGTCC 44188 |||| |||||| || |||||| |||||||||||||| | ||| ||| | || || Sbjct 13661 ACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGAGAGAGTGCGGCCATCCTCA 13720 Query 44189 AGCTGCTTCCCGGCAAAGATCAAACGCTGCTGATCTGAAGGCACACCT 44236 |||||||| ||||||||||||| |||||||| |||| || | |||| Sbjct 13721 AGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCTGGGGGAATACCT 13768 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 359981791954554