Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Mortierella_20alpina_20[genbank_20GCA_5F001021685.1_202015-06-08] 1,962 sequences; 36,305,198 total letters Query= NC_033780.1 Length=144510 Score E Sequences producing significant alignments: (Bits) Value seq1899 150 2e-31 seq1237 147 2e-30 seq1584 96.9 3e-15 seq1254 96.9 3e-15 >seq1899 Length=11869 Score = 150 bits (166), Expect = 2e-31 Identities = 173/230 (75%), Gaps = 2/230 (1%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | |||| ||| || || ||||||||| ||||| || || || Sbjct 5486 GCCACCACGAAGACGGAGGACCAAATGGAGGGTCGACTCCTTCTGGATGTTGTAATCAGA 5545 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 |||||| || |||| ||||||||||||||||| || || || ||||| ||||| | ||| Sbjct 5546 GAGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGGGG 5605 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCA 41813 | || |||||||||| || || ||||| ||| | | || ||| |||||| | Sbjct 5606 GATGCCCTCCTTGTCCTGAATCTTCTGCTT-GACGTTATCGATGGTATCGGACGACTCGA 5664 Query 41814 CCTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 |||| | || || || ||||| ||||| ||||| ||||||||||||||| Sbjct 5665 CCTCGAGGGTGATGGTCTTACCAGTCAGGGTCTTGACGAAAATCTGCATG 5714 Score = 113 bits (124), Expect = 4e-20 Identities = 115/150 (77%), Gaps = 0/150 (0%) Strand=Plus/Plus Query 41635 GCCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGA 41694 ||| || || ||||| | |||| || || ||| ||||||||| ||||| ||||| || Sbjct 5714 GCCACCACGGAGACGGAGGACCAAGTGAAGAGTGGACTCCTTCTGGATGTTGTAGTCCGA 5773 Query 41695 GAGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGG 41754 ||||||||| |||| || |||||||||||||| || || |||||||| ||||| | ||| Sbjct 5774 GAGGGTGCGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCTGGGGG 5833 Query 41755 AACGCTCTCCTTGTCCATGATTTTTTGCTT 41784 | | |||||| || ||| || ||||| Sbjct 5834 GATACCCTCCTTATCTTGGATCTTCTGCTT 5863 >seq1237 Length=85294 Score = 147 bits (162), Expect = 2e-30 Identities = 171/228 (75%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| || || || ||||||||| || || ||||| ||| Sbjct 35485 CCACCACGGAGACGGAGGACCAAGTGAAGGGTCGACTCCTTCTGGATATTGTAGTCAGAG 35544 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || |||| ||||||||||||||||| || || || ||||| ||||| | |||| Sbjct 35545 AGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGGGGA 35604 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | || ||||||||| ||| || ||||| || | | | ||||| |||||||| Sbjct 35605 ATGCCCTCCTTGTCTTGGATCTTCTGCTT-GACATTGTCAATGGTGTCCGAAGACTCCAC 35663 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCAT 41862 ||||| ||| || || || || |||| ||||| |||||||||||||| Sbjct 35664 CTCCAACGTGATGGTCTTGCCGGTCAAGGTCTTGACGAAAATCTGCAT 35711 Score = 131 bits (144), Expect = 2e-25 Identities = 168/229 (73%), Gaps = 2/229 (1%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| || || || |||||||||||| || ||||| ||| Sbjct 36020 CCACCACGGAGACGGAGGACCAAGTGAAGGGTCGACTCCTTCTGAATATTGTAGTCAGAG 36079 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || |||| |||||||||||||||||||| || || ||||| ||||| | || Sbjct 36080 AGGGTACGGCCGTCCTCGAGCTGCTTGCCGGCGAAGATGAGACGCTGCTGGTCTGGAGGG 36139 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTTCAACGACGAC-ACAGTGTCGCTCGACTCCAC 41814 | | ||||||||| || || ||||| ||| | | | ||||| ||||| || Sbjct 36140 ATACCCTCCTTGTCTTGAATCTTCTGCTT-GACGTTGTCAATGGTGTCCGAAGACTCGAC 36198 Query 41815 CTCCACCGTTATCGTTTTACCCGTCAGCGTCTTTACGAAAATCTGCATG 41863 ||| | || || || || || || || ||||| ||||||||||||||| Sbjct 36199 CTCGAGGGTGATGGTCTTGCCGGTAAGGGTCTTGACGAAAATCTGCATG 36247 Score = 98.7 bits (108), Expect = 9e-16 Identities = 111/149 (74%), Gaps = 0/149 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| || || || ||||||||| ||||| ||||| ||| Sbjct 35713 CCACCACGGAGACGGAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAGTCAGAG 35772 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 ||||| || |||| || |||||||||||||| || || || ||||| ||||| | ||| Sbjct 35773 AGGGTACGGCCGTCCTCAAGCTGCTTGCCGGCAAAGATGAGACGCTGCTGGTCTGGGGGG 35832 Query 41756 ACGCTCTCCTTGTCCATGATTTTTTGCTT 41784 | | |||||| || ||| || ||||| Sbjct 35833 ATACCCTCCTTATCTTGGATCTTCTGCTT 35861 >seq1584 Length=118991 Score = 96.9 bits (106), Expect = 3e-15 Identities = 94/121 (78%), Gaps = 0/121 (0%) Strand=Plus/Plus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || ||||| ||||| | |||| || || || ||||||||| ||||| || || ||| Sbjct 13643 CCACCGCGGAGACGGAGGACCAAGTGAAGGGTCGACTCCTTCTGGATGTTGTAATCCGAG 13702 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || |||||||||||||| || ||||||||||| ||||| | |||| Sbjct 13703 AGAGTGCGGCCATCCTCAAGCTGCTTGCCGGCAAAGATCAGGCGCTGCTGGTCTGGGGGA 13762 Query 41756 A 41756 | Sbjct 13763 A 13763 >seq1254 Length=67957 Score = 96.9 bits (106), Expect = 3e-15 Identities = 94/121 (78%), Gaps = 0/121 (0%) Strand=Plus/Minus Query 41636 CCGCCGCGTAGACGTAACACCAGATGCAGCGTGCTCTCCTTCTGAATGTTATAGTCGGAG 41695 || || || ||||| | |||| || || || ||||||||| ||||| ||||| ||| Sbjct 3387 CCACCACGGAGACGGAGGACCAAGTGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGAG 3328 Query 41696 AGGGTGCGCTCGTCGTCGAGCTGCTTGCCGGCGAATATCAGGCGCTGTTGGTCCGCGGGA 41755 || ||||| | || || ||||||||||||||||| || |||||||| ||||| | |||| Sbjct 3327 AGAGTGCGGCCATCCTCAAGCTGCTTGCCGGCGAAGATGAGGCGCTGCTGGTCTGGGGGA 3268 Query 41756 A 41756 | Sbjct 3267 A 3267 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 462292661994400