Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neocallimastix_20californiae_20[genbank_20GCA_5F002104975.1_202017- 04-20] 1,819 sequences; 193,032,486 total letters Query= NC_001350.1 Length=112930 Score E Sequences producing significant alignments: (Bits) Value seq413 91.5 1e-13 >seq413 Length=437716 Score = 91.5 bits (100), Expect = 1e-13 Identities = 120/163 (74%), Gaps = 4/163 (2%) Strand=Plus/Minus Query 101681 AGAGCATCAATGTGATCTACATAGATGTGAGCATCTCCTATAGTATGGATAAACTCTCCA 101740 ||||| ||||| |||| ||| || || | ||| || ||| ||| ||||| |||| Sbjct 66560 AGAGCTTCAATATGATTATTATAAATATGTGTATCACCCATATCATGAATAAAAGTTCCA 66501 Query 101741 GGCACTAGATT--AGTGACATGAGCAATCATGCAAGTTAAAAGAGAATAGCTAGCAATGT 101798 || || ||| | | ||||||||||| || |||||||| | |||||| |||||||| | Sbjct 66500 GGTT-TA-ATTCCAATTACATGAGCAATTATACAAGTTAATAAAGAATAACTAGCAATAT 66443 Query 101799 TAAATGGCACTCCTAACCCCATATCAGCTGATCTTTGATACAG 101841 |||| || || ||||| || | |||| ||||| ||||| || Sbjct 66442 TAAAAGGAACACCTAATCCAACATCACAAGATCTCTGATAAAG 66400 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 361243191399569