Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neocallimastix_20californiae_20[genbank_20GCA_5F002104975.1_202017- 04-20] 1,819 sequences; 193,032,486 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq1265 104 2e-17 seq1454 98.7 8e-16 seq502 96.9 3e-15 seq1259 93.3 3e-14 seq952 87.8 1e-12 seq585 87.8 1e-12 >seq1265 Length=1280584 Score = 104 bits (114), Expect = 2e-17 Identities = 148/207 (71%), Gaps = 1/207 (0%) Strand=Plus/Plus Query 42919 TCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAA 42978 || ||||| | ||||||||| || | || | | || || |||||||| || |||||| Sbjct 265651 TCTTTTTGAATATTGTAATCAGAAAGAGTTCTACCATCTTCTAATTGTTTACCTGCAAAA 265710 Query 42979 ATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTG 43038 || | || ||||| || | || | ||||||||| || ||| ||||||| | Sbjct 265711 ATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTATCTTGAATCTTAGCTTTGACATTT 265770 Query 43039 CCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACA 43098 ||| || || || || || |||| || ||||| ||||| |||| |||||| ||| Sbjct 265771 TCAATAGTATCAGAAGATTCAACTTCTAAAGTGATAGTCTTTCCAGTTAAAGTTTTAACA 265830 Query 43099 AAAATTTGCATTTTCTTAATTTTATTT 43125 |||||||||||||| || | ||||||| Sbjct 265831 AAAATTTGCATTTTATTTA-TTTATTT 265856 Score = 98.7 bits (108), Expect = 8e-16 Identities = 160/228 (70%), Gaps = 2/228 (1%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 |||||||| || | ||| || ||||| | ||| || ||||| | ||| ||||| || Sbjct 257027 CCTCCACGAAGACGTAATACTAAATGAAGAGTAGATTCTTTTTGAATATTATAATCTGAA 257086 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | || | | | || || |||||||| || |||||||| | || ||||| || | || Sbjct 257087 AGAGTTCTTCCATCTTCTAATTGTTTTCCTGCAAAAATAAGACGTTGTTGGTCTGGTGGG 257146 Query 43003 ACACCTTCTTTTTCGCTGA-TCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGAC 43061 | ||||||||| || |||| || ||||||| | ||| || || || || || Sbjct 257147 ATACCTTCTTTATC-CTGAATCTTAGCTTTGACATTTTCAATAGTATCAGAAGATTCAAC 257205 Query 43062 GTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 |||| || || || || || |||| ||| || |||||||||||||| Sbjct 257206 TTCTAAAGTGATGGTCTTACCAGTTAAAGTCTTGACAAAAATTTGCAT 257253 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| || | ||| || ||||| | |||| || ||||| | ||| ||||| || Sbjct 257255 CCACCACGAAGACGTAAAACTAAATGAAGAGTGGATTCTTTTTGAATATTATAATCTGAA 257314 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | || | | | || || |||||||| || |||||||| | || ||||| || | || Sbjct 257315 AGAGTTCTTCCATCTTCTAATTGTTTTCCTGCAAAAATAAGACGTTGTTGGTCTGGTGGA 257374 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||||||||| || ||| ||||||| | ||| || || | || || Sbjct 257375 ATACCTTCTTTATCTTGAATCTTTGCTTTGACATTTTCAATGGTATCAGAAAATTCAACT 257434 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 |||| || ||||| ||||| |||| ||| || |||||||||||||| Sbjct 257435 TCTAAAGTGATAGTCTTTCCAGTTAAAGTCTTGACAAAAATTTGCAT 257481 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| || | ||| || ||||| | ||| || ||||| | ||| ||||| || Sbjct 260893 CCACCACGAAGACGTAAAACTAAATGAAGAGTAGATTCTTTTTGAATATTATAATCTGAA 260952 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | || | | || || |||||||| || |||||||| | || |||||||| | || Sbjct 260953 AGAGTTCTACCATCTTCTAATTGTTTACCTGCAAAAATAAGACGTTGTTGATCTGGAGGG 261012 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||||||||| || ||| ||||||| | ||| || || || || || Sbjct 261013 ATACCTTCTTTATCTTGAATCTTTGCTTTGACATTTTCAATGGTATCAGAAGATTCAACT 261072 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 |||| || || || ||||| |||| |||||| |||||||||||||| Sbjct 261073 TCTAAAGTGATTGTCTTTCCAGTTAAAGTTTTAACAAAAATTTGCAT 261119 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| || | ||| || ||||| | |||| || ||||| | ||| ||||| || Sbjct 264703 CCACCACGAAGACGTAAAACTAAATGAAGAGTGGATTCTTTTTGAATATTATAATCTGAA 264762 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | ||||| | || || |||||||| || |||||||| | || |||||||| | || Sbjct 264763 AGAGTACGACCATCTTCTAATTGTTTACCTGCAAAAATAAGACGTTGTTGATCTGGTGGG 264822 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||||||||| || || ||||||| | ||| || || || || || Sbjct 264823 ATACCTTCTTTATCTTGAATTTTAGCTTTGACATTTTCAATGGTATCAGAAGATTCAACT 264882 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | || || || ||||| |||| ||| || |||||||||||||| Sbjct 264883 TCAAGGGTAATGGTCTTTCCAGTTAAAGTCTTGACAAAAATTTGCAT 264929 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| || | ||| || ||||| | |||| || ||||| | ||||||||| || Sbjct 264931 CCACCACGAAGACGTAAAACTAAATGAAGAGTGGATTCTTTTTGAATATTGTAATCAGAA 264990 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | || | | | || || |||||||| || |||||||| | || |||||||| | || Sbjct 264991 AGAGTTCTTCCATCTTCTAATTGTTTTCCTGCAAAAATAAGACGTTGTTGATCTGGTGGA 265050 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||||||||| || ||| | ||||| | ||| || || || || || Sbjct 265051 ATACCTTCTTTATCTTGAATCTTGGCCTTGACATTTTCAATGGTATCAGAAGATTCAACT 265110 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | || || || ||||| |||| ||| || |||||||||||||| Sbjct 265111 TCAAGGGTAATGGTCTTTCCAGTTAAAGTCTTGACAAAAATTTGCAT 265157 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| || | ||| || ||||| | ||| || ||||| | ||| ||||| || Sbjct 265159 CCACCACGAAGACGTAAAACTAAATGAAGTGTGGATTCTTTTTGAATATTATAATCAGAA 265218 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | ||||| | || || |||||||| || |||||||| | || |||||||| | || Sbjct 265219 AGAGTACGACCATCTTCTAATTGTTTACCTGCAAAAATAAGACGTTGTTGATCTGGTGGA 265278 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||||||||| || || ||||||| | |||| || || || || || Sbjct 265279 ATACCTTCTTTATCTTGAATTTTAGCTTTGACATTTTCAACGGTATCAGAAGATTCAACT 265338 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | || || || ||||| |||| ||| || |||||||||||||| Sbjct 265339 TCAAGGGTAATGGTCTTTCCAGTTAAAGTCTTGACAAAAATTTGCAT 265385 Score = 95.1 bits (104), Expect = 9e-15 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| || | ||| || ||||| | |||| || ||||| | ||| ||||| || Sbjct 257483 CCACCACGAAGACGTAAAACTAAATGAAGAGTGGATTCTTTTTGAATATTATAATCTGAA 257542 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | || | | || || |||||||| || |||||||| | || |||||||| | || Sbjct 257543 AGAGTTCTACCATCTTCTAATTGTTTTCCTGCAAAAATAAGACGTTGTTGATCTGGTGGG 257602 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||||||||| || || ||||||| | ||| || || || || || Sbjct 257603 ATACCTTCTTTATCTTGAATTTTAGCTTTGACATTTTCAATGGTATCAGAAGATTCAACT 257662 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTT 43112 |||| || || || || || |||| ||| || ||||||||||||||||| Sbjct 257663 TCTAAAGTGATGGTCTTACCAGTTAAAGTCTTGACAAAAATTTGCATTTT 257712 Score = 95.1 bits (104), Expect = 9e-15 Identities = 158/227 (70%), Gaps = 1/227 (0%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 |||||||| || | ||| || ||||| | ||| || ||||| | ||| ||||| || Sbjct 260438 CCTCCACGAAGACGTAAAACTAAATGAAGAGTAGATTC-TTTTGGATATTATAATCTGAA 260496 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | || | | | || || |||||||| || |||||||| | || |||||||| | || Sbjct 260497 AGAGTTCTTCCATCTTCTAATTGTTTACCTGCAAAAATAAGACGTTGTTGATCTGGAGGG 260556 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||||||||| || || ||||||| | ||| || || || || || Sbjct 260557 ATACCTTCTTTATCTTGAATTTTAGCTTTGACATTTTCAATAGTATCAGAAGATTCAACT 260616 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 |||| || || | ||||| |||| |||||| |||||||||||||| Sbjct 260617 TCTAAAGTGATTGACTTTCCAGTTAAAGTTTTAACAAAAATTTGCAT 260663 Score = 95.1 bits (104), Expect = 9e-15 Identities = 159/230 (69%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| || | ||| || ||||||| ||| || ||||| | ||| ||||| || Sbjct 261121 CCACCACGAAGACGTAAAACTAAATGGAGAGTAGATTCTTTTTGAATATTATAATCTGAA 261180 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | || | | || || |||||||| || |||||||| | || |||||||| | || Sbjct 261181 AGAGTTCTACCATCTTCTAATTGTTTTCCTGCAAAAATAAGACGTTGTTGATCTGGTGGG 261240 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||||||||| || || ||||||| | ||| || || || || || Sbjct 261241 ATACCTTCTTTATCTTGAATTTTAGCTTTGACATTTTCAATAGTATCAGAAGATTCAACT 261300 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTT 43112 |||| || || || || || |||| ||| || ||||||||||||||||| Sbjct 261301 TCTAAAGTGATGGTCTTACCAGTTAAAGTCTTGACAAAAATTTGCATTTT 261350 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| || | ||| || ||||| | ||| || ||||| | ||| ||||| || Sbjct 265387 CCACCACGAAGACGTAAAACTAAATGAAGTGTGGATTCTTTTTGAATATTATAATCAGAA 265446 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | ||||| | || || |||||||| || |||||||| | || ||||| || | || Sbjct 265447 AGAGTACGACCATCTTCTAATTGTTTACCTGCAAAAATAAGACGTTGTTGGTCTGGTGGA 265506 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||||||||| || || ||||||| | ||| || || | ||| || Sbjct 265507 ATACCTTCTTTATCTTGAATTTTAGCTTTGACATTTTCAATGGTATCAGAGGACTCAACT 265566 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 |||| || || ||||| || || | ||| || |||||||||||||| Sbjct 265567 TCTAAAGTGATGGTTTTACCAGTCAAAGTCTTGACAAAAATTTGCAT 265613 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 |||||||| || | ||| || || || | ||| || ||||| | ||| ||||| || Sbjct 264475 CCTCCACGTAGACGTAAAACTAAGTGAAGAGTAGATTCTTTTTGAATATTATAATCTGAA 264534 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | || | | || || |||||||| || |||||||| | || |||||||| | || Sbjct 264535 AGAGTTCTACCATCTTCTAATTGTTTTCCTGCAAAAATAAGACGTTGTTGATCTGGTGGG 264594 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||||||||| || ||| | ||||| | ||| || || || || || Sbjct 264595 ATACCTTCTTTATCTTGAATCTTGGCCTTGACATTTTCAATGGTATCAGAAGATTCAACT 264654 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | || || || ||||| |||| ||| || |||||||||||||| Sbjct 264655 TCAAGGGTAATGGTCTTTCCAGTTAAAGTCTTGACAAAAATTTGCAT 264701 >seq1454 Length=643854 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 |||||||| || | ||| || ||||| | |||| |||||||| | |||||||| || Sbjct 189716 CCTCCACGAAGACGTAAGACTAAATGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGAA 189775 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | ||||| | || || ||||| || || |||||||| | || |||||||| | || Sbjct 189776 AGAGTACGACCATCTTCTAATTGCTTACCAGCAAAAATAAGACGTTGTTGATCTGGTGGA 189835 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | |||||| || || ||| | || || | ||| || || || || || Sbjct 189836 ATACCTTCCTTATCTTGAATCTTAGCCTTAACATTTTCAATGGTATCAGAAGATTCAACT 189895 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 |||| || ||||| || || |||| ||| || |||||||||||||| Sbjct 189896 TCTAAGGTGATAGTCTTACCAGTTAAAGTCTTAACAAAAATTTGCAT 189942 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| || | ||| || || || | |||| |||||||| | |||||||| || Sbjct 190856 CCACCACGAAGACGTAAAACTAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGAA 190915 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | ||||| | || || ||||| || || |||||||| | || |||||||| | || Sbjct 190916 AGAGTACGACCATCTTCTAATTGCTTACCTGCAAAAATAAGACGTTGTTGATCTGGTGGA 190975 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | |||||| || || ||| | || || | ||| || ||| || || || Sbjct 190976 ATACCTTCCTTATCTTGAATCTTAGCCTTAACATTTTCAATAGTATCGGAAGATTCAACT 191035 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | || ||||| || || |||| ||| || |||||||||||||| Sbjct 191036 TCAAGAGTGATAGTCTTACCAGTTAAAGTCTTAACAAAAATTTGCAT 191082 Score = 89.7 bits (98), Expect = 4e-13 Identities = 168/246 (68%), Gaps = 2/246 (1%) Strand=Plus/Plus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| || | ||| || || || | |||| |||||||| | |||||||| || Sbjct 191084 CCACCACGAAGACGTAAAACTAAGTGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGAA 191143 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | ||||| | || || ||||| || || |||||||| | || |||||||| | || Sbjct 191144 AGAGTACGACCATCTTCTAATTGCTTACCTGCAAAAATAAGACGTTGTTGATCTGGTGGA 191203 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | |||||| || || ||| | || || | ||| || || || || || Sbjct 191204 ATACCTTCCTTATCTTGAATCTTAGCCTTAACATTTTCAATAGTATCAGAAGATTCAACT 191263 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTTCTTAATTTTA 43122 |||| || ||||| || || |||| || || || |||||||||||||| | ||||| Sbjct 191264 TCTAAAGTAATAGTCTTACCAGTTAATGTCTTTACGAAAATTTGCATTTTAGT--TTTTA 191321 Query 43123 TTTGTA 43128 ||| || Sbjct 191322 TTTATA 191327 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| || | ||| || || || | ||| |||||||| | ||||||||| || Sbjct 198257 CCACCACGAAGACGTAAAACTAAGTGTAGAGTAGATTCCTTTTGAATATTGTAATCAGAA 198198 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | ||||| | || || ||||| || || |||||||| | || |||||||| | || Sbjct 198197 AGAGTACGACCATCTTCTAATTGCTTACCTGCAAAAATAAGACGTTGTTGATCTGGTGGA 198138 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | |||||| || || ||| | || || | ||| || || || || || Sbjct 198137 ATACCTTCCTTATCTTGAATCTTAGCCTTAACATTTTCAATGGTATCAGAAGATTCAACT 198078 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCAT 43109 || | || ||||| || || |||| |||||| |||||||||||||| Sbjct 198077 TCAAGAGTGATAGTCTTACCAGTTAAAGTTTTAACAAAAATTTGCAT 198031 >seq502 Length=415512 Score = 96.9 bits (106), Expect = 3e-15 Identities = 139/196 (71%), Gaps = 0/196 (0%) Strand=Plus/Minus Query 42920 CCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAA 42979 ||||||| | |||||||| || | || | || || || |||||||| ||||| |||| Sbjct 365527 CCTTTTGAATGTTGTAATCAGAAAGAGTTCTGTCATCTTCTAATTGTTTACCGGCGAAAA 365468 Query 42980 TCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGC 43039 | || || ||||| || | || | |||||| ||||| ||| | || || || Sbjct 365467 TTAAACGTTGTTGGTCAGGTGGAATACCTTCCTTTTCTTGAATCTTGTTCTTAACATTGA 365408 Query 43040 CAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAA 43099 ||| ||||| || ||| || || | |||||||| ||||| || || ||||| || | Sbjct 365407 CAATACTGTCGGAAGACTCAACCTCAAGGGTTATAGTCTTTCCAGTAAGGGTTTTGACGA 365348 Query 43100 AAATTTGCATTTTCTT 43115 |||||||||| || || Sbjct 365347 AAATTTGCATCTTATT 365332 >seq1259 Length=61445 Score = 93.3 bits (102), Expect = 3e-14 Identities = 138/196 (70%), Gaps = 0/196 (0%) Strand=Plus/Plus Query 42920 CCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAA 42979 ||||||| | ||||| || || | || | || || || |||||||| || || |||| Sbjct 16834 CCTTTTGGATGTTGTAGTCAGAAAGAGTTCTGTCATCTTCTAATTGTTTACCAGCGAAAA 16893 Query 42980 TCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGC 43039 | || || |||||||| | || | |||||||||||| ||| | || || || Sbjct 16894 TTAAACGTTGTTGATCTGGTGGAATACCTTCTTTTTCTTGAATCTTGTTCTTAACATTGA 16953 Query 43040 CAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAA 43099 ||| | ||| || ||| || || | |||||||| ||||| || || ||||| || | Sbjct 16954 CAATACTATCGGAAGACTCAACCTCAAGGGTTATAGTCTTTCCAGTAAGGGTTTTAACGA 17013 Query 43100 AAATTTGCATTTTCTT 43115 |||||||||| || || Sbjct 17014 AAATTTGCATCTTATT 17029 >seq952 Length=293713 Score = 87.8 bits (96), Expect = 1e-12 Identities = 134/191 (70%), Gaps = 0/191 (0%) Strand=Plus/Minus Query 42919 TCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAA 42978 |||||||| | ||||||||||| | ||||| | || || ||||| || ||||| || Sbjct 167299 TCCTTTTGAATGTTGTAATCGGAAAGAGTACGACCATCTTCTAATTGCTTACCGGCGAAG 167240 Query 42979 ATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTG 43038 || | || ||||| || | || | |||||| || || ||| ||||||| | Sbjct 167239 ATAAGACGTTGTTGGTCTGGTGGGATACCTTCCTTATCTTGAATCTTAGCTTTGACATTT 167180 Query 43039 CCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACA 43098 ||| |||||| | ||||| || | || ||||| || || || || ||||| ||| Sbjct 167179 TCAATAGTGTCGGAGGATTCGACCTCAAGGGTAATAGTCTTACCCGTAAGGGTTTTGACA 167120 Query 43099 AAAATTTGCAT 43109 ||||||||||| Sbjct 167119 AAAATTTGCAT 167109 >seq585 Length=8358 Score = 87.8 bits (96), Expect = 1e-12 Identities = 162/238 (68%), Gaps = 0/238 (0%) Strand=Plus/Minus Query 42883 CCTCCACGCAGTCTTAACACCAAATGGATAGTGCTCTCCTTTTGCACATTGTAATCGGAC 42942 || ||||| || | ||| || || || | ||| || ||||| | ||| ||||| || Sbjct 4129 CCACCACGAAGACGTAAAACTAAGTGAAGAGTAGATTCTTTTTGAATATTATAATCAGAA 4070 Query 42943 AATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAAATCAATCGCTGTTGATCGGCCGGC 43002 | || | | | || || |||||||| || |||||||| | || ||||| || | || Sbjct 4069 AGAGTTCTTCCATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGA 4010 Query 43003 ACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTGCCAACTGTGTCGCCAGCCTCGACG 43062 | ||||||||| || ||| ||||||| | ||| || || | || || Sbjct 4009 ATACCTTCTTTATCTTGGATTTTAGCTTTGACATTTTCAATAGTATCTGAGGATTCAACT 3950 Query 43063 TCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACAAAAATTTGCATTTTCTTAATTT 43120 || | || |||||||| || |||| ||| || || || ||||||||||| |||||| Sbjct 3949 TCAAGAGTAATAGTTTTACCAGTTAAAGTCTTAACGAAGATTTGCATTTTTATAATTT 3892 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381361145393502