Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neocallimastix_20californiae_20[genbank_20GCA_5F002104975.1_202017- 04-20] 1,819 sequences; 193,032,486 total letters Query= NC_005137.2 Length=131160 Score E Sequences producing significant alignments: (Bits) Value seq1265 118 9e-22 seq585 104 2e-17 seq1232 98.7 8e-16 seq1454 89.7 4e-13 >seq1265 Length=1280584 Score = 118 bits (130), Expect = 9e-22 Identities = 155/215 (72%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 19997 AACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCT 20056 || || ||||| || |||||||||||||| || || ||||| | |||| || |||| Sbjct 261136 AAAACTAAATGGAGAGTAGATTCTTTTTGAATATTATAATCTGAAAGAGTTCTACCATCT 261195 Query 20057 TCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCG 20116 || |||||||| || ||| ||||||| | |||||||| || | |||||||| || Sbjct 261196 TCTAATTGTTTTCCTGCAAAAATAAGACGTTGTTGATCTGGTGGGATACCTTCTTTATCT 261255 Query 20117 GCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTT 20176 |||||| ||| || | ||| || ||| || ||| ||| | || ||||| Sbjct 261256 TGAATTTTAGCTTTGACATTTTCAATAGTATCAGAAGATTCAACTTCTAAAGTGATGGTC 261315 Query 20177 TTGCCGGTCAACGTTTTGACAAAAATTTGCATTTT 20211 || || || || || |||||||||||||||||||| Sbjct 261316 TTACCAGTTAAAGTCTTGACAAAAATTTGCATTTT 261350 Score = 118 bits (130), Expect = 9e-22 Identities = 174/245 (71%), Gaps = 1/245 (0%) Strand=Plus/Plus Query 19965 atatattttatc-attttCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTT 20023 ||||||||||| | | |||||| |||| | || || || || || |||||||||||| Sbjct 264457 ATATATTTTATTTAATATCCTCCACGTAGACGTAAAACTAAGTGAAGAGTAGATTCTTTT 264516 Query 20024 TGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGC 20083 || || || ||||| | |||| || |||||| |||||||| || ||| ||||||| Sbjct 264517 TGAATATTATAATCTGAAAGAGTTCTACCATCTTCTAATTGTTTTCCTGCAAAAATAAGA 264576 Query 20084 CTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACA 20143 | |||||||| || | |||||||| || ||| || || || | ||| Sbjct 264577 CGTTGTTGATCTGGTGGGATACCTTCTTTATCTTGAATCTTGGCCTTGACATTTTCAATG 264636 Query 20144 GAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATT 20203 | ||| || ||| ||| | ||||||||| || || || || || |||||||||||| Sbjct 264637 GTATCAGAAGATTCAACTTCAAGGGTAATGGTCTTTCCAGTTAAAGTCTTGACAAAAATT 264696 Query 20204 TGCAT 20208 ||||| Sbjct 264697 TGCAT 264701 Score = 113 bits (124), Expect = 4e-20 Identities = 152/212 (72%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 19997 AACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCT 20056 || || ||||| ||||| ||||||||||| || || ||||| | ||| | |||| Sbjct 265174 AAAACTAAATGAAGTGTGGATTCTTTTTGAATATTATAATCAGAAAGAGTACGACCATCT 265233 Query 20057 TCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCG 20116 || |||||||| || ||| ||||||| | |||||||| || | |||||||| || Sbjct 265234 TCTAATTGTTTACCTGCAAAAATAAGACGTTGTTGATCTGGTGGAATACCTTCTTTATCT 265293 Query 20117 GCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTT 20176 |||||| ||| || | |||| | ||| || ||| ||| | ||||||||| Sbjct 265294 TGAATTTTAGCTTTGACATTTTCAACGGTATCAGAAGATTCAACTTCAAGGGTAATGGTC 265353 Query 20177 TTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || || || || || ||||||||||||||||| Sbjct 265354 TTTCCAGTTAAAGTCTTGACAAAAATTTGCAT 265385 Score = 109 bits (120), Expect = 5e-19 Identities = 153/215 (71%), Gaps = 0/215 (0%) Strand=Plus/Plus Query 19997 AACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCT 20056 || || ||||| || || ||||||||||| || || ||||| | |||| || |||| Sbjct 257498 AAAACTAAATGAAGAGTGGATTCTTTTTGAATATTATAATCTGAAAGAGTTCTACCATCT 257557 Query 20057 TCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCG 20116 || |||||||| || ||| ||||||| | |||||||| || | |||||||| || Sbjct 257558 TCTAATTGTTTTCCTGCAAAAATAAGACGTTGTTGATCTGGTGGGATACCTTCTTTATCT 257617 Query 20117 GCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTT 20176 |||||| ||| || | ||| | ||| || ||| ||| | || ||||| Sbjct 257618 TGAATTTTAGCTTTGACATTTTCAATGGTATCAGAAGATTCAACTTCTAAAGTGATGGTC 257677 Query 20177 TTGCCGGTCAACGTTTTGACAAAAATTTGCATTTT 20211 || || || || || |||||||||||||||||||| Sbjct 257678 TTACCAGTTAAAGTCTTGACAAAAATTTGCATTTT 257712 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 19979 tttCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCG 20038 |||||||| || | | || || ||||| || |||||||||||||| || || ||||| Sbjct 257024 TTTCCTCCACGAAGACGTAATACTAAATGAAGAGTAGATTCTTTTTGAATATTATAATCT 257083 Query 20039 CCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACG 20098 | |||| | |||||| |||||||| || ||| ||||||| | ||||| || Sbjct 257084 GAAAGAGTTCTTCCATCTTCTAATTGTTTTCCTGCAAAAATAAGACGTTGTTGGTCTGGT 257143 Query 20099 GGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCC 20158 || | |||||||| || ||| || ||| || | ||| || ||| || ||| Sbjct 257144 GGGATACCTTCTTTATCCTGAATCTTAGCTTTGACATTTTCAATAGTATCAGAAGATTCA 257203 Query 20159 GTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 ||| | || ||||| || || || || || ||||||||||||||||| Sbjct 257204 ACTTCTAAAGTGATGGTCTTACCAGTTAAAGTCTTGACAAAAATTTGCAT 257253 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 19997 AACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCT 20056 || || || || || |||||||||||||| || || ||||| | |||| || |||| Sbjct 260680 AAAACTAAGTGAAGAGTAGATTCTTTTTGAATATTATAATCTGAAAGAGTTCTACCATCT 260739 Query 20057 TCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCG 20116 || |||||||| || ||| ||||||| | |||||||| || | |||||||| || Sbjct 260740 TCTAATTGTTTTCCTGCAAAAATAAGACGTTGTTGATCTGGTGGAATACCTTCTTTATCT 260799 Query 20117 GCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTT 20176 ||| || || || | ||| | ||| || ||| ||| | ||||||||| Sbjct 260800 TGAATCTTGGCCTTGACATTTTCAATGGTATCAGAAGATTCAACTTCAAGGGTAATGGTC 260859 Query 20177 TTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || || || || || ||||||||||||||||| Sbjct 260860 TTTCCAGTTAAAGTCTTGACAAAAATTTGCAT 260891 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 19997 AACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCT 20056 || || ||||| || |||||||||||||| || || ||||| | |||| || |||| Sbjct 260908 AAAACTAAATGAAGAGTAGATTCTTTTTGAATATTATAATCTGAAAGAGTTCTACCATCT 260967 Query 20057 TCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCG 20116 || |||||||| || ||| ||||||| | |||||||| || | |||||||| || Sbjct 260968 TCTAATTGTTTACCTGCAAAAATAAGACGTTGTTGATCTGGAGGGATACCTTCTTTATCT 261027 Query 20117 GCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTT 20176 ||| ||| ||| || | ||| | ||| || ||| ||| | || || || Sbjct 261028 TGAATCTTTGCTTTGACATTTTCAATGGTATCAGAAGATTCAACTTCTAAAGTGATTGTC 261087 Query 20177 TTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || || || || ||||| |||||||||||||| Sbjct 261088 TTTCCAGTTAAAGTTTTAACAAAAATTTGCAT 261119 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 19997 AACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCT 20056 || || ||||| || || ||||||||||| || || ||||| | ||| | |||| Sbjct 264718 AAAACTAAATGAAGAGTGGATTCTTTTTGAATATTATAATCTGAAAGAGTACGACCATCT 264777 Query 20057 TCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCG 20116 || |||||||| || ||| ||||||| | |||||||| || | |||||||| || Sbjct 264778 TCTAATTGTTTACCTGCAAAAATAAGACGTTGTTGATCTGGTGGGATACCTTCTTTATCT 264837 Query 20117 GCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTT 20176 |||||| ||| || | ||| | ||| || ||| ||| | ||||||||| Sbjct 264838 TGAATTTTAGCTTTGACATTTTCAATGGTATCAGAAGATTCAACTTCAAGGGTAATGGTC 264897 Query 20177 TTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || || || || || ||||||||||||||||| Sbjct 264898 TTTCCAGTTAAAGTCTTGACAAAAATTTGCAT 264929 Score = 104 bits (114), Expect = 2e-17 Identities = 150/212 (71%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 19997 AACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCT 20056 || || ||||| || || ||||||||||| || |||||||| | |||| | |||| Sbjct 264946 AAAACTAAATGAAGAGTGGATTCTTTTTGAATATTGTAATCAGAAAGAGTTCTTCCATCT 265005 Query 20057 TCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCG 20116 || |||||||| || ||| ||||||| | |||||||| || | |||||||| || Sbjct 265006 TCTAATTGTTTTCCTGCAAAAATAAGACGTTGTTGATCTGGTGGAATACCTTCTTTATCT 265065 Query 20117 GCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTT 20176 ||| || || || | ||| | ||| || ||| ||| | ||||||||| Sbjct 265066 TGAATCTTGGCCTTGACATTTTCAATGGTATCAGAAGATTCAACTTCAAGGGTAATGGTC 265125 Query 20177 TTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || || || || || ||||||||||||||||| Sbjct 265126 TTTCCAGTTAAAGTCTTGACAAAAATTTGCAT 265157 Score = 102 bits (112), Expect = 7e-17 Identities = 146/206 (71%), Gaps = 0/206 (0%) Strand=Plus/Plus Query 20006 TGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTTCCAATTGT 20065 || || |||||||||||||| || |||||||| | |||| || |||||| |||||| Sbjct 265639 TGAAGAGTAGATTCTTTTTGAATATTGTAATCAGAAAGAGTTCTACCATCTTCTAATTGT 265698 Query 20066 TTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGGCAATTTTT 20125 || || ||| ||||||| | ||||| || || | |||||||| || ||| || Sbjct 265699 TTACCTGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTATCTTGAATCTTA 265758 Query 20126 TGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTTTGCCGGTC 20185 ||| || | ||| || ||| || ||| ||| | || || || || || || Sbjct 265759 GCTTTGACATTTTCAATAGTATCAGAAGATTCAACTTCTAAAGTGATAGTCTTTCCAGTT 265818 Query 20186 AACGTTTTGACAAAAATTTGCATTTT 20211 || ||||| ||||||||||||||||| Sbjct 265819 AAAGTTTTAACAAAAATTTGCATTTT 265844 Score = 96.9 bits (106), Expect = 3e-15 Identities = 160/230 (70%), Gaps = 1/230 (0%) Strand=Plus/Plus Query 19979 tttCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCG 20038 |||||||| || | | || || ||||| || |||||||||||| | || || ||||| Sbjct 260435 TTTCCTCCACGAAGACGTAAAACTAAATGAAGAGTAGATTCTTTTGG-ATATTATAATCT 260493 Query 20039 CCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACG 20098 | |||| | |||||| |||||||| || ||| ||||||| | |||||||| Sbjct 260494 GAAAGAGTTCTTCCATCTTCTAATTGTTTACCTGCAAAAATAAGACGTTGTTGATCTGGA 260553 Query 20099 GGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCC 20158 || | |||||||| || |||||| ||| || | ||| || ||| || ||| Sbjct 260554 GGGATACCTTCTTTATCTTGAATTTTAGCTTTGACATTTTCAATAGTATCAGAAGATTCA 260613 Query 20159 GTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 ||| | || || | || || || || ||||| |||||||||||||| Sbjct 260614 ACTTCTAAAGTGATTGACTTTCCAGTTAAAGTTTTAACAAAAATTTGCAT 260663 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 19997 AACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCT 20056 || || ||||| ||||| ||||||||||| || || ||||| | ||| | |||| Sbjct 265402 AAAACTAAATGAAGTGTGGATTCTTTTTGAATATTATAATCAGAAAGAGTACGACCATCT 265461 Query 20057 TCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCG 20116 || |||||||| || ||| ||||||| | ||||| || || | |||||||| || Sbjct 265462 TCTAATTGTTTACCTGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTATCT 265521 Query 20117 GCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTT 20176 |||||| ||| || | ||| | ||| | || ||| | || |||||| Sbjct 265522 TGAATTTTAGCTTTGACATTTTCAATGGTATCAGAGGACTCAACTTCTAAAGTGATGGTT 265581 Query 20177 TTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || || ||||| || ||||||||||||||||| Sbjct 265582 TTACCAGTCAAAGTCTTGACAAAAATTTGCAT 265613 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 19997 AACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCT 20056 || || ||||| || || ||||||||||| || || ||||| | |||| | |||| Sbjct 257270 AAAACTAAATGAAGAGTGGATTCTTTTTGAATATTATAATCTGAAAGAGTTCTTCCATCT 257329 Query 20057 TCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCG 20116 || |||||||| || ||| ||||||| | ||||| || || | |||||||| || Sbjct 257330 TCTAATTGTTTTCCTGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTATCT 257389 Query 20117 GCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTT 20176 ||| ||| ||| || | ||| | ||| | ||| ||| | || || || Sbjct 257390 TGAATCTTTGCTTTGACATTTTCAATGGTATCAGAAAATTCAACTTCTAAAGTGATAGTC 257449 Query 20177 TTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || || || || || ||||||||||||||||| Sbjct 257450 TTTCCAGTTAAAGTCTTGACAAAAATTTGCAT 257481 >seq585 Length=8358 Score = 104 bits (114), Expect = 2e-17 Identities = 201/292 (69%), Gaps = 6/292 (2%) Strand=Plus/Minus Query 19921 ATAAAACATGTGtttaatttaataaat-tttattataaaatttaaatatattttatcatt 19979 ||||| || | |||||| | ||| | |||||| ||||||| | | |||| ||| || Sbjct 5332 ATAAATTATATTTTTAATATCATATTTATTTATT-TAAAATT-ATTTTTATTATATATTT 5275 Query 19980 ---ttCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAAT 20036 |||| || || | | || || || || || || ||||||||||| || ||||||| Sbjct 5274 AATTTCCACCACGAAGACGTAAGACTAAGTGAAGAGTGGATTCTTTTTGAATATTGTAAT 5215 Query 20037 CGCCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGA 20096 | | |||| | |||||| |||||||| || ||| ||||||| | ||||| || Sbjct 5214 CAGAAAGAGTTCTTCCATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTG 5155 Query 20097 CGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTT 20156 || | |||||||| || |||||| ||| || | ||| || ||| | || Sbjct 5154 GTGGAATACCTTCTTTATCTTGAATTTTAGCTTTAACATTTTCAATAGTATCAGAGGATT 5095 Query 20157 CCGTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 | ||| | |||||||| || || || || ||||| ||||| |||||||| Sbjct 5094 CAACTTCAAGAGTAATGGTCTTACCAGTTAAAGTTTTAACAAAGATTTGCAT 5043 Score = 98.7 bits (108), Expect = 8e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 19997 AACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCT 20056 || || || || || |||||||||||||| || |||||||| | |||| | |||| Sbjct 4798 AAAACTAAGTGAAGAGTAGATTCTTTTTGAATATTGTAATCAGAAAGAGTTCTTCCATCT 4739 Query 20057 TCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCG 20116 || |||||||| || ||| ||||||| | ||||| || || | |||||||| || Sbjct 4738 TCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTATCT 4679 Query 20117 GCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTT 20176 |||||| ||| || | ||| || ||| | ||| ||| | |||||||| Sbjct 4678 TGAATTTTAGCTTTAACATTTTCAATAGTATCAGAGGATTCAACTTCAAGAGTAATGGTC 4619 Query 20177 TTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || || || || ||||| ||||| |||||||| Sbjct 4618 TTACCAGTTAAAGTTTTAACAAAGATTTGCAT 4587 Score = 89.7 bits (98), Expect = 4e-13 Identities = 150/217 (69%), Gaps = 0/217 (0%) Strand=Plus/Minus Query 19997 AACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCT 20056 || || || || || |||||||||||||| || || ||||| | |||| | |||| Sbjct 4114 AAAACTAAGTGAAGAGTAGATTCTTTTTGAATATTATAATCAGAAAGAGTTCTTCCATCT 4055 Query 20057 TCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCG 20116 || |||||||| || ||| ||||||| | ||||| || || | |||||||| || Sbjct 4054 TCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTATCT 3995 Query 20117 GCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTT 20176 ||||| ||| || | ||| || ||| | ||| ||| | ||||| ||| Sbjct 3994 TGGATTTTAGCTTTGACATTTTCAATAGTATCTGAGGATTCAACTTCAAGAGTAATAGTT 3935 Query 20177 TTGCCGGTCAACGTTTTGACAAAAATTTGCATTTTTA 20213 || || || || || || || || ||||||||||||| Sbjct 3934 TTACCAGTTAAAGTCTTAACGAAGATTTGCATTTTTA 3898 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 19997 AACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCT 20056 || || || || || |||||||||||||| || |||||||| | |||| | |||| Sbjct 4570 AAAACTAAGTGAAGAGTAGATTCTTTTTGAATATTGTAATCAGAAAGAGTTCTTCCATCT 4511 Query 20057 TCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCG 20116 || |||||||| || ||| ||||||| | ||||| || || | |||||||| || Sbjct 4510 TCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTATCT 4451 Query 20117 GCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTT 20176 |||||| ||| || | ||| || ||| | ||| ||| | ||||| ||| Sbjct 4450 TGAATTTTAGCTTTAACATTTTCAATAGTATCAGAGGATTCAACTTCAAGAGTAATAGTT 4391 Query 20177 TTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || || || || || || || || |||||||| Sbjct 4390 TTACCAGTTAAAGTCTTAACGAAGATTTGCAT 4359 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 19997 AACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCT 20056 || || || || || |||||||||||||| || |||||||| | |||| | |||| Sbjct 5026 AAAACTAAGTGAAGAGTAGATTCTTTTTGAATATTGTAATCAGAAAGAGTTCTTCCATCT 4967 Query 20057 TCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCG 20116 || |||||||| || ||| ||||||| | ||||| || || | |||||||| || Sbjct 4966 TCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTATCT 4907 Query 20117 GCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTT 20176 |||||| ||| || | ||| || ||| | ||| ||| | ||||| ||| Sbjct 4906 TGAATTTTAGCTTTAACATTTTCAATAGTATCAGAGGATTCAACTTCAAGAGTAATAGTT 4847 Query 20177 TTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || || || || || || || || |||||||| Sbjct 4846 TTACCAGTTAAAGTCTTAACGAAGATTTGCAT 4815 Score = 86.0 bits (94), Expect = 5e-12 Identities = 146/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 19997 AACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCT 20056 || || || || || || ||||||||||| || |||||||| | |||| | |||| Sbjct 4342 AAAACTAAGTGAAGAGTGGATTCTTTTTGAATATTGTAATCAGAAAGAGTTCTTCCATCT 4283 Query 20057 TCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCG 20116 || |||||||| || ||| ||||||| | ||||| || || | |||||||| || Sbjct 4282 TCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTATCT 4223 Query 20117 GCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTT 20176 ||||| ||| || | ||| | || || ||| ||| | |||||||| Sbjct 4222 TGGATTTTAGCTTTGACATTTTCAATTGTGTCAGAAGATTCAACTTCAAGAGTAATGGTC 4163 Query 20177 TTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || || || || ||||| ||||| |||||||| Sbjct 4162 TTACCAGTTAAAGTTTTAACAAAGATTTGCAT 4131 >seq1232 Length=735369 Score = 98.7 bits (108), Expect = 8e-16 Identities = 149/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 19997 AACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCT 20056 || || || || || |||||||| ||||| ||||||||||| | |||| || |||| Sbjct 63273 AAGACTAAGTGGAGAGTAGATTCCTTTTGAATGTTGTAATCAGAAAGAGTTCTACCATCT 63214 Query 20057 TCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCG 20116 || |||||||| || ||| ||||||| | ||||| || || | ||||| || || Sbjct 63213 TCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTATCT 63154 Query 20117 GCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTT 20176 |||||| ||| || | ||| || ||| || ||| ||| | ||||||||| Sbjct 63153 TGAATTTTAGCTTTGACATTTTCAATAGTATCAGAAGATTCAACTTCAAGAGTAATGGTT 63094 Query 20177 TTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || || || || || || || || |||||||| Sbjct 63093 TTACCAGTTAAAGTCTTAACGAAGATTTGCAT 63062 Score = 95.1 bits (104), Expect = 1e-14 Identities = 148/212 (70%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 19997 AACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCT 20056 || || || || || |||||||| ||||| ||||||||||| | |||| || |||| Sbjct 61905 AAGACTAAGTGGAGAGTAGATTCCTTTTGAATGTTGTAATCAGAAAGAGTTCTACCATCT 61846 Query 20057 TCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCG 20116 || |||||||| || ||| ||||||| | ||||| || || | ||||| || || Sbjct 61845 TCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTATCT 61786 Query 20117 GCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTT 20176 |||||| ||| || | ||| || ||| || ||| ||| | |||||||| Sbjct 61785 TGAATTTTAGCTTTGACATTTTCAATAGTATCAGAAGATTCAACTTCAAGAGTAATGGTC 61726 Query 20177 TTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || || || || || || || || |||||||| Sbjct 61725 TTACCAGTTAATGTCTTAACGAAGATTTGCAT 61694 Score = 91.5 bits (100), Expect = 1e-13 Identities = 151/218 (69%), Gaps = 0/218 (0%) Strand=Plus/Minus Query 19997 AACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCT 20056 || || || || || |||||||| ||||| || || ||||| | |||| || |||| Sbjct 61677 AAGACTAAGTGGAGAGTAGATTCCTTTTGAATATTATAATCAGAAAGAGTTCTACCATCT 61618 Query 20057 TCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCG 20116 || ||||| || || ||| ||||||| | ||||| || || | ||||| || || Sbjct 61617 TCTAATTGCTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTATCT 61558 Query 20117 GCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTT 20176 |||||| ||| || | ||| || ||| || ||| ||| | ||||||||| Sbjct 61557 TGAATTTTAGCTTTGACATTTTCAATAGTATCAGAAGATTCAACTTCAAGAGTAATGGTT 61498 Query 20177 TTGCCGGTCAACGTTTTGACAAAAATTTGCATTTTTAA 20214 || || || || || || || || ||||||||||| || Sbjct 61497 TTACCAGTTAAAGTCTTTACGAAGATTTGCATTTTGAA 61460 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Minus Query 19997 AACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCT 20056 || || || || || |||||||| ||||| || |||||||| | |||| || |||| Sbjct 63045 AAGACTAAGTGGAGAGTAGATTCCTTTTGAATATTGTAATCAGAAAGAGTTCTACCATCT 62986 Query 20057 TCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCG 20116 || |||||||| || ||| | ||||| | ||||| || || | ||||| || || Sbjct 62985 TCTAATTGTTTACCAGCAAAGATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTATCT 62926 Query 20117 GCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTT 20176 |||||| ||| || | ||| || ||| || ||| ||| | ||||||||| Sbjct 62925 TGAATTTTAGCTTTGACATTTTCAATAGTATCAGAAGATTCAACTTCAAGAGTAATGGTT 62866 Query 20177 TTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || || || || || || || || |||||||| Sbjct 62865 TTACCAGTTAAAGTCTTAACGAAGATTTGCAT 62834 Score = 87.8 bits (96), Expect = 2e-12 Identities = 185/273 (68%), Gaps = 5/273 (2%) Strand=Plus/Minus Query 19937 atttaataaat-tttattataaaatttaaatatattttatcattttCCTCCTCGTAACCT 19995 ||||| |||| |||| | | |||| |||||| ||||| ||||| || || | | Sbjct 63558 ATTTATTAAAAATTTAGTTTCAAATG-AAATATCTTTTAA---TTTCCACCACGAAGACG 63503 Query 19996 CAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATC 20055 || || || || || |||||||| ||||| ||||||||||| | |||| || ||| Sbjct 63502 TAAGACTAAGTGGAGAGTAGATTCCTTTTGAATGTTGTAATCAGAAAGAGTTCTACCATC 63443 Query 20056 TTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTC 20115 ||| ||||| || || ||| ||||||| | ||||| || || | ||||| || || Sbjct 63442 TTCTAATTGCTTACCAGCAAAAATAAGACGTTGTTGGTCTGGAGGGATACCTTCCTTATC 63383 Query 20116 GGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGT 20175 |||||| ||| || | ||| | || || ||| ||| | ||||| || Sbjct 63382 TTGAATTTTAGCTTTGACATTTTCAATGGTGTCAGAAGATTCAACTTCAAGAGTAATAGT 63323 Query 20176 TTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || || || || || || || || |||||||| Sbjct 63322 CTTACCAGTTAAAGTCTTAACGAAGATTTGCAT 63290 >seq1454 Length=643854 Score = 89.7 bits (98), Expect = 4e-13 Identities = 147/212 (69%), Gaps = 0/212 (0%) Strand=Plus/Plus Query 19997 AACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCT 20056 || || || || || |||||||| ||||| || |||||||| | ||| | |||| Sbjct 190643 AATACTAAGTGAAGAGTAGATTCCTTTTGAATATTGTAATCAGAAAGAGTACGACCATCT 190702 Query 20057 TCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCG 20116 || ||||| || || ||| ||||||| | |||||||| || | ||||| || || Sbjct 190703 TCTAATTGCTTACCTGCAAAAATAAGACGTTGTTGATCTGGTGGAATACCTTCCTTATCT 190762 Query 20117 GCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTT 20176 |||||| || || | ||| || ||| || ||| ||| | |||||| || Sbjct 190763 TGAATTTTAGCCTTAACATTTTCAATAGTATCAGAAGATTCAACTTCAAGGGTAATAGTC 190822 Query 20177 TTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 || || || || ||||| |||||||||||||| Sbjct 190823 TTACCAGTTAAAGTTTTAACAAAAATTTGCAT 190854 Score = 89.7 bits (98), Expect = 4e-13 Identities = 184/271 (68%), Gaps = 2/271 (1%) Strand=Plus/Minus Query 19938 tttaataaattttattataaaatttaaatatattttatcattttCCTCCTCGTAACCTCA 19997 ||||| ||||| | ||||| | || || |||||| | |||| || || || | | | Sbjct 198299 TTTAAAAAATTCT-TTATATTTTATACATTTATTTTTTAATTT-CCACCACGAAGACGTA 198242 Query 19998 ACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCGCCCATAGTTTTAGAATCTT 20057 | || || ||||| |||||||| ||||| || |||||||| | ||| | ||||| Sbjct 198241 AAACTAAGTGTAGAGTAGATTCCTTTTGAATATTGTAATCAGAAAGAGTACGACCATCTT 198182 Query 20058 CCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACGGGCACGCCTTCTTTGTCGG 20117 | ||||| || || ||| ||||||| | |||||||| || | ||||| || || Sbjct 198181 CTAATTGCTTACCTGCAAAAATAAGACGTTGTTGATCTGGTGGAATACCTTCCTTATCTT 198122 Query 20118 CAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCCGTTTCCACGGTAATGGTTT 20177 ||| || || || | ||| | ||| || ||| ||| | || || || | Sbjct 198121 GAATCTTAGCCTTAACATTTTCAATGGTATCAGAAGATTCAACTTCAAGAGTGATAGTCT 198062 Query 20178 TGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 | || || || ||||| |||||||||||||| Sbjct 198061 TACCAGTTAAAGTTTTAACAAAAATTTGCAT 198031 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Plus Query 19979 tttCCTCCTCGTAACCTCAACACCAAATGTAGTGTAGATTCTTTTTGTATGTTGTAATCG 20038 |||||||| || | | || || ||||| || || ||||| ||||| ||||||||||| Sbjct 189713 TTTCCTCCACGAAGACGTAAGACTAAATGAAGAGTGGATTCCTTTTGAATGTTGTAATCA 189772 Query 20039 CCCATAGTTTTAGAATCTTCCAATTGTTTGCCCGCATAAATAAGCCTCTGTTGATCGACG 20098 | ||| | |||||| ||||| || || ||| ||||||| | |||||||| Sbjct 189773 GAAAGAGTACGACCATCTTCTAATTGCTTACCAGCAAAAATAAGACGTTGTTGATCTGGT 189832 Query 20099 GGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACCTGGCCAACAGAATCGCCAGGTTCC 20158 || | ||||| || || ||| || || || | ||| | ||| || ||| Sbjct 189833 GGAATACCTTCCTTATCTTGAATCTTAGCCTTAACATTTTCAATGGTATCAGAAGATTCA 189892 Query 20159 GTTTCCACGGTAATGGTTTTGCCGGTCAACGTTTTGACAAAAATTTGCAT 20208 ||| | ||| || || || || || || || || |||||||||||||| Sbjct 189893 ACTTCTAAGGTGATAGTCTTACCAGTTAAAGTCTTAACAAAAATTTGCAT 189942 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 419577898145139