Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neocallimastix_20californiae_20[genbank_20GCA_5F002104975.1_202017- 04-20] 1,819 sequences; 193,032,486 total letters Query= NC_013756.1 Length=368454 Score E Sequences producing significant alignments: (Bits) Value seq1521 111 4e-19 seq1454 111 4e-19 seq952 111 4e-19 seq1265 109 1e-18 seq585 95.1 3e-14 >seq1521 Length=627264 Score = 111 bits (122), Expect = 4e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||| || | ||| || |||||||| | |||||| |||| | ||| | |||||| Sbjct 324335 AGAACAAGATGTAAAGTAGATTCCTTTTGAATGTTGTAATCAGAAAGAGTACGACCATCT 324276 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || | ||||| ||||| ||||| ||||| || ||||| || ||| ||||| || Sbjct 324275 TCTAATTGCTTACCGGCAAAGATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTATCT 324216 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 || ||||| || || ||| | ||||| | | ||| || || | || |||||| Sbjct 324215 TGGATCTTAGCTTTGACATTTTCAATAGTGTCGGAGGATTCAACCTCAAGGGTAATCGTC 324156 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || ||||| ||||| ||||| Sbjct 324155 TTACCCGTAAGGGTTTTGACAAAGATTTG 324127 >seq1454 Length=643854 Score = 111 bits (122), Expect = 4e-19 Identities = 145/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| ||||| || |||||||| | ||||| |||| | ||| | |||||||| | || Sbjct 189967 GTGAAGAGTAGATTCCTTTTGAATATTGTAATCAGAAAGAGTACGACCATCTTCTAATTG 190026 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 ||| || || || || ||||| || ||||| || ||| ||||| || |||||||| Sbjct 190027 CTTACCTGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTATCTTGAATCTT 190086 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 ||| || ||| | ||| || | || ||| || || || || || |||||||| || Sbjct 190087 AGCCTTAACATTTTCAATGGTATCAGATGATTCAACTTCTAAAGTAATAGTCTTACCAGT 190146 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 | |||||| ||||||||||| Sbjct 190147 TAAAGTTTTAACAAAAATTTG 190167 Score = 105 bits (116), Expect = 2e-17 Identities = 154/218 (71%), Gaps = 0/218 (0%) Strand=Plus/Plus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | | ||| | || ||||| || |||||||| | |||||| |||| | ||| Sbjct 189722 CGAAGACGTAAGACTAAATGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGAAAGAGTA 189781 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 | |||||||| | ||||| || || || || ||||| || || || || ||| ||| Sbjct 189782 CGACCATCTTCTAATTGCTTACCAGCAAAAATAAGACGTTGTTGATCTGGTGGAATACCT 189841 Query 199529 TCTCGCTCCTGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAAC 199588 || || |||||||| ||| || ||| | ||| || | | ||| || || || Sbjct 189842 TCCTTATCTTGAATCTTAGCCTTAACATTTTCAATGGTATCAGAAGATTCAACTTCTAAG 189901 Query 199589 GTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 ||||| |||||||| || | ||| || ||||||||||| Sbjct 189902 GTGATAGTCTTACCAGTTAAAGTCTTAACAAAAATTTG 189939 Score = 105 bits (116), Expect = 2e-17 Identities = 144/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| ||||| || |||||||| | ||||| |||| | ||| | |||||||| | || Sbjct 198006 GTGAAGAGTGGATTCCTTTTGAATATTGTAATCAGAAAGAGTACGACCATCTTCTAATTG 197947 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 ||| || || || || ||||| || ||||| || ||| ||||| || |||||||| Sbjct 197946 CTTACCTGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTATCTTGAATCTT 197887 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 ||| || ||| | || || | || ||| || || || || || |||||||| || Sbjct 197886 AGCCTTAACATTTTCAATAGTATCAGATGATTCAACTTCTAAAGTAATAGTCTTACCAGT 197827 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 | |||||| ||||||||||| Sbjct 197826 TAAAGTTTTAACAAAAATTTG 197806 Score = 102 bits (112), Expect = 2e-16 Identities = 149/210 (71%), Gaps = 3/210 (1%) Strand=Plus/Minus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| ||||| || |||||||| | ||||| |||| | ||| | |||||||| | || Sbjct 197550 GTGAAGAGTGGATTCCTTTTGAATATTGTAATCAGAAAGAGTACGACCATCTTCTAATTG 197491 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 ||| || || || || ||||| || ||||| || ||| ||||| || ||||| || Sbjct 197490 CTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTATCTTGAATTTT 197431 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 ||| || ||| | || || | || ||| || || || ||||| |||||||| || Sbjct 197430 AGCCTTAACATTTTCAATAGTATCAGATGATTCAACTTCTAAGGTGATAGTCTTACCAGT 197371 Query 199606 GAGAGTTTTCACAAAAATTTGGTACATTTT 199635 | ||| || ||||||||||| |||||| Sbjct 197370 TAAAGTCTTAACAAAAATTTG---CATTTT 197344 Score = 102 bits (112), Expect = 2e-16 Identities = 143/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| ||||| || |||||||| | ||||| |||| | ||| | |||||||| | || Sbjct 198234 GTGTAGAGTAGATTCCTTTTGAATATTGTAATCAGAAAGAGTACGACCATCTTCTAATTG 198175 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 ||| || || || || ||||| || || || || ||| ||||| || |||||||| Sbjct 198174 CTTACCTGCAAAAATAAGACGTTGTTGATCTGGTGGAATACCTTCCTTATCTTGAATCTT 198115 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 ||| || ||| | ||| || | | ||| || || | ||||| |||||||| || Sbjct 198114 AGCCTTAACATTTTCAATGGTATCAGAAGATTCAACTTCAAGAGTGATAGTCTTACCAGT 198055 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 | |||||| ||||||||||| Sbjct 198054 TAAAGTTTTAACAAAAATTTG 198034 Score = 98.7 bits (108), Expect = 2e-15 Identities = 148/210 (70%), Gaps = 3/210 (1%) Strand=Plus/Minus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| ||||| || |||||||| | || || |||| | ||| | |||||||| | || Sbjct 203982 GTGAAGAGTGGATTCCTTTTGAATATTATAATCAGAAAGAGTACGACCATCTTCTAATTG 203923 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 ||| || || || || ||||| || || || || ||| ||||| || |||||||| Sbjct 203922 CTTACCAGCAAAAATAAGACGTTGTTGATCTGGTGGAATACCTTCCTTATCTTGAATCTT 203863 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 ||| || ||| | ||| || | || ||| || || | ||||| |||||||| || Sbjct 203862 AGCCTTAACATTTTCAATGGTATCAGATGATTCAACTTCAAGAGTGATAGTCTTACCAGT 203803 Query 199606 GAGAGTTTTCACAAAAATTTGGTACATTTT 199635 | ||| || ||||||||||| |||||| Sbjct 203802 TAAAGTCTTTACAAAAATTTG---CATTTT 203776 Score = 96.9 bits (106), Expect = 8e-15 Identities = 142/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| || || || |||||||| | ||||| |||| | ||| | |||||||| | || Sbjct 190423 GTGAAGTGTAGATTCCTTTTGAATATTGTAATCAGAAAGAGTACGACCATCTTCTAATTG 190482 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 ||| || || || || ||||| || ||||| || ||| ||||| || |||||||| Sbjct 190483 CTTACCTGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTATCTTGAATCTT 190542 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 ||| || ||| | || || | || ||| || || || || || |||||||| || Sbjct 190543 AGCCTTAACATTTTCAATAGTATCAGATGATTCAACTTCTAAAGTAATAGTCTTACCAGT 190602 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 | ||| || ||||||||||| Sbjct 190603 TAAAGTCTTAACAAAAATTTG 190623 Score = 96.9 bits (106), Expect = 8e-15 Identities = 142/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| ||||| || |||||||| | |||||| |||| | ||| | |||||||| | || Sbjct 190879 GTGAAGAGTGGATTCCTTTTGAATGTTGTAATCAGAAAGAGTACGACCATCTTCTAATTG 190938 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 ||| || || || || ||||| || || || || ||| ||||| || |||||||| Sbjct 190939 CTTACCTGCAAAAATAAGACGTTGTTGATCTGGTGGAATACCTTCCTTATCTTGAATCTT 190998 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 ||| || ||| | || || | | ||| || || | ||||| |||||||| || Sbjct 190999 AGCCTTAACATTTTCAATAGTATCGGAAGATTCAACTTCAAGAGTGATAGTCTTACCAGT 191058 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 | ||| || ||||||||||| Sbjct 191059 TAAAGTCTTAACAAAAATTTG 191079 Score = 96.9 bits (106), Expect = 8e-15 Identities = 142/201 (71%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| ||||| || |||||||| | ||||| |||| | ||| | |||||||| | || Sbjct 204666 GTGAAGAGTAGATTCCTTTTGAATATTGTAATCAGAAAGAGTACGACCATCTTCTAATTG 204607 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 ||| || || || || ||||| || ||||| || ||| ||||| || |||||||| Sbjct 204606 CTTACCTGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTATCTTGAATCTT 204547 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 ||| || ||| | ||| || | | ||| || || | || || |||||||| || Sbjct 204546 AGCCTTAACATTTTCAATGGTATCAGAAGATTCAACTTCAAGGGTAATAGTCTTACCAGT 204487 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 | ||| || ||||||||||| Sbjct 204486 TAAAGTCTTAACAAAAATTTG 204466 Score = 93.3 bits (102), Expect = 1e-13 Identities = 141/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| ||||| || |||||||| | ||||| |||| | ||| | |||||||| | || Sbjct 190195 GTGAAGAGTAGATTCCTTTTGAATATTGTAATCAGAAAGAGTACGACCATCTTCTAATTG 190254 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 ||| || || || || ||||| || || || || ||| ||||| || ||||| || Sbjct 190255 CTTACCAGCAAAAATAAGACGTTGTTGATCTGGTGGAATACCTTCCTTATCTTGAATTTT 190314 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 ||| || ||| | || || | | ||| || || || ||||| |||||||| || Sbjct 190315 AGCCTTAACATTTTCAATAGTATCAGAAGATTCAACTTCTAAGGTGATAGTCTTACCAGT 190374 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 | ||| || ||||||||||| Sbjct 190375 TAAAGTCTTAACAAAAATTTG 190395 Score = 87.8 bits (96), Expect = 4e-12 Identities = 140/201 (70%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| ||||| || |||||||| | ||||| |||| | ||| | |||||||| | || Sbjct 190651 GTGAAGAGTAGATTCCTTTTGAATATTGTAATCAGAAAGAGTACGACCATCTTCTAATTG 190710 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 ||| || || || || ||||| || || || || ||| ||||| || ||||| || Sbjct 190711 CTTACCTGCAAAAATAAGACGTTGTTGATCTGGTGGAATACCTTCCTTATCTTGAATTTT 190770 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 ||| || ||| | || || | | ||| || || | || || |||||||| || Sbjct 190771 AGCCTTAACATTTTCAATAGTATCAGAAGATTCAACTTCAAGGGTAATAGTCTTACCAGT 190830 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 | |||||| ||||||||||| Sbjct 190831 TAAAGTTTTAACAAAAATTTG 190851 >seq952 Length=293713 Score = 111 bits (122), Expect = 4e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || ||||| || | ||| || |||||||| | |||||| || | | ||| | |||||| Sbjct 167320 AGAACAAGATGTAAAGTAGATTCCTTTTGAATGTTGTAATCGGAAAGAGTACGACCATCT 167261 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || | ||||| ||||||||||| ||||| || ||||| || || ||||| || Sbjct 167260 TCTAATTGCTTACCGGCGAAGATAAGACGTTGTTGGTCTGGTGGGATACCTTCCTTATCT 167201 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| || || ||| | ||||| | | ||| || || | || || ||| Sbjct 167200 TGAATCTTAGCTTTGACATTTTCAATAGTGTCGGAGGATTCGACCTCAAGGGTAATAGTC 167141 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTG 199626 |||||||| || ||||| ||||||||||| Sbjct 167140 TTACCCGTAAGGGTTTTGACAAAAATTTG 167112 >seq1265 Length=1280584 Score = 109 bits (120), Expect = 1e-18 Identities = 156/219 (71%), Gaps = 3/219 (1%) Strand=Plus/Plus Query 199418 AGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCT 199477 || |||||||| ||||| || || ||||| | ||||| |||| | ||| || |||||| Sbjct 265630 AGAACAAGGTGAAGAGTAGATTCTTTTTGAATATTGTAATCAGAAAGAGTTCTACCATCT 265689 Query 199478 TCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCC 199537 || | || || || || || || ||||| || ||||| || ||| |||||| || Sbjct 265690 TCTAATTGTTTACCTGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTATCT 265749 Query 199538 TGAATCTTTTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTC 199597 |||||||| || || ||| | || || | | ||| || || || ||||| ||| Sbjct 265750 TGAATCTTAGCTTTGACATTTTCAATAGTATCAGAAGATTCAACTTCTAAAGTGATAGTC 265809 Query 199598 TTACCCGTGAGAGTTTTCACAAAAATTTGGTACATTTTA 199636 || || || | |||||| ||||||||||| ||||||| Sbjct 265810 TTTCCAGTTAAAGTTTTAACAAAAATTTG---CATTTTA 265845 Score = 95.1 bits (104), Expect = 3e-14 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || ||||| || || ||||| | || || || | | ||| ||||||||||| | || Sbjct 257051 TGAAGAGTAGATTCTTTTTGAATATTATAATCTGAAAGAGTTCTTCCATCTTCTAATTGT 257110 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 ||||| || || || ||||| || ||||| || || |||||| ||||||||||| Sbjct 257111 TTTCCTGCAAAAATAAGACGTTGTTGGTCTGGTGGGATACCTTCTTTATCCTGAATCTTA 257170 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 || || ||| | || || | | ||| || || || ||||| |||||||| || Sbjct 257171 GCTTTGACATTTTCAATAGTATCAGAAGATTCAACTTCTAAAGTGATGGTCTTACCAGTT 257230 Query 199607 AGAGTTTTCACAAAAATTTG 199626 | ||| || ||||||||||| Sbjct 257231 AAAGTCTTGACAAAAATTTG 257250 Score = 95.1 bits (104), Expect = 3e-14 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || ||||| || || ||||| | || || || | | ||| ||||||||||| | || Sbjct 257279 TGAAGAGTGGATTCTTTTTGAATATTATAATCTGAAAGAGTTCTTCCATCTTCTAATTGT 257338 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 ||||| || || || ||||| || ||||| || ||| |||||| || ||||||||| Sbjct 257339 TTTCCTGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTATCTTGAATCTTT 257398 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 || || ||| | ||| || | ||| || || || ||||| ||||| || || Sbjct 257399 GCTTTGACATTTTCAATGGTATCAGAAAATTCAACTTCTAAAGTGATAGTCTTTCCAGTT 257458 Query 199607 AGAGTTTTCACAAAAATTTG 199626 | ||| || ||||||||||| Sbjct 257459 AAAGTCTTGACAAAAATTTG 257478 Score = 95.1 bits (104), Expect = 3e-14 Identities = 141/200 (71%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || ||||| || || ||||| | ||||| |||| | ||| ||||||||||| | || Sbjct 264955 TGAAGAGTGGATTCTTTTTGAATATTGTAATCAGAAAGAGTTCTTCCATCTTCTAATTGT 265014 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 ||||| || || || ||||| || || || || ||| |||||| || |||||||| Sbjct 265015 TTTCCTGCAAAAATAAGACGTTGTTGATCTGGTGGAATACCTTCTTTATCTTGAATCTTG 265074 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 ||| || ||| | ||| || | | ||| || || | || || ||||| || || Sbjct 265075 GCCTTGACATTTTCAATGGTATCAGAAGATTCAACTTCAAGGGTAATGGTCTTTCCAGTT 265134 Query 199607 AGAGTTTTCACAAAAATTTG 199626 | ||| || ||||||||||| Sbjct 265135 AAAGTCTTGACAAAAATTTG 265154 Score = 91.5 bits (100), Expect = 3e-13 Identities = 140/200 (70%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || ||||| || || ||||| | || || || | | ||| || |||||||| | || Sbjct 260917 TGAAGAGTAGATTCTTTTTGAATATTATAATCTGAAAGAGTTCTACCATCTTCTAATTGT 260976 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 || || || || || ||||| || || || ||| || |||||| || ||||||||| Sbjct 260977 TTACCTGCAAAAATAAGACGTTGTTGATCTGGAGGGATACCTTCTTTATCTTGAATCTTT 261036 Query 199547 TGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGTG 199606 || || ||| | ||| || | | ||| || || || ||||| ||||| || || Sbjct 261037 GCTTTGACATTTTCAATGGTATCAGAAGATTCAACTTCTAAAGTGATTGTCTTTCCAGTT 261096 Query 199607 AGAGTTTTCACAAAAATTTG 199626 | |||||| ||||||||||| Sbjct 261097 AAAGTTTTAACAAAAATTTG 261116 Score = 87.8 bits (96), Expect = 4e-12 Identities = 148/211 (70%), Gaps = 5/211 (2%) Strand=Plus/Plus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 || ||||| || || ||||| | || || || | | ||| || |||||||| | || Sbjct 257507 TGAAGAGTGGATTCTTTTTGAATATTATAATCTGAAAGAGTTCTACCATCTTCTAATTGT 257566 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 ||||| || || || ||||| || || || || || |||||| || ||||| ||| Sbjct 257567 TTTCCTGCAAAAATAAGACGTTGTTGATCTGGTGGGATACCTTCTTTATCTTGAAT-TTT 257625 Query 199547 TGCTTC-ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 |||| || ||| | ||| || | | ||| || || || ||||| |||||||| || Sbjct 257626 AGCTTTGACATTTTCAATGGTATCAGAAGATTCAACTTCTAAAGTGATGGTCTTACCAGT 257685 Query 199606 GAGAGTTTTCACAAAAATTTGGTACATTTTA 199636 | ||| || ||||||||||| ||||||| Sbjct 257686 TAAAGTCTTGACAAAAATTTG---CATTTTA 257713 Score = 87.8 bits (96), Expect = 4e-12 Identities = 148/211 (70%), Gaps = 5/211 (2%) Strand=Plus/Plus Query 199427 TGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTGC 199486 |||||||| || || ||||| | || || || | | ||| || |||||||| | || Sbjct 261145 TGGAGAGTAGATTCTTTTTGAATATTATAATCTGAAAGAGTTCTACCATCTTCTAATTGT 261204 Query 199487 TTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTTT 199546 ||||| || || || ||||| || || || || || |||||| || ||||| ||| Sbjct 261205 TTTCCTGCAAAAATAAGACGTTGTTGATCTGGTGGGATACCTTCTTTATCTTGAAT-TTT 261263 Query 199547 TGCTTC-ACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 |||| || ||| | || || | | ||| || || || ||||| |||||||| || Sbjct 261264 AGCTTTGACATTTTCAATAGTATCAGAAGATTCAACTTCTAAAGTGATGGTCTTACCAGT 261323 Query 199606 GAGAGTTTTCACAAAAATTTGGTACATTTTA 199636 | ||| || ||||||||||| ||||||| Sbjct 261324 TAAAGTCTTGACAAAAATTTG---CATTTTA 261351 Score = 84.2 bits (92), Expect = 5e-11 Identities = 139/201 (69%), Gaps = 0/201 (0%) Strand=Plus/Plus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| ||||| || || ||||| | || || || | | ||| || |||||||| | || Sbjct 260688 GTGAAGAGTAGATTCTTTTTGAATATTATAATCTGAAAGAGTTCTACCATCTTCTAATTG 260747 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 ||||| || || || ||||| || || || || ||| |||||| || |||||||| Sbjct 260748 TTTTCCTGCAAAAATAAGACGTTGTTGATCTGGTGGAATACCTTCTTTATCTTGAATCTT 260807 Query 199546 TTGCTTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCGT 199605 ||| || ||| | ||| || | | ||| || || | || || ||||| || || Sbjct 260808 GGCCTTGACATTTTCAATGGTATCAGAAGATTCAACTTCAAGGGTAATGGTCTTTCCAGT 260867 Query 199606 GAGAGTTTTCACAAAAATTTG 199626 | ||| || ||||||||||| Sbjct 260868 TAAAGTCTTGACAAAAATTTG 260888 >seq585 Length=8358 Score = 95.1 bits (104), Expect = 3e-14 Identities = 154/219 (70%), Gaps = 2/219 (1%) Strand=Plus/Minus Query 199409 CGAAGTCTCAGGACAAGGTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTC 199468 ||||| | | ||| | ||| ||||| || || ||||| | ||||| |||| | ||| Sbjct 5263 CGAAGACGTAAGACTAAGTGAAGAGTGGATTCTTTTTGAATATTGTAATCAGAAAGAGTT 5204 Query 199469 CTTCCATCTTCCAGCTGCTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCT 199528 ||||||||||| | || || || || || || ||||| || ||||| || ||| ||| Sbjct 5203 CTTCCATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCT 5144 Query 199529 TCTCGCTCCTGAATCTTTTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAA 199587 ||| || ||||| ||| || || || ||| | || || | | ||| || || | Sbjct 5143 TCTTTATCTTGAAT-TTTAGCTTTAACATTTTCAATAGTATCAGAGGATTCAACTTCAAG 5085 Query 199588 CGTGATCGTCTTACCCGTGAGAGTTTTCACAAAAATTTG 199626 || || |||||||| || | |||||| ||||| ||||| Sbjct 5084 AGTAATGGTCTTACCAGTTAAAGTTTTAACAAAGATTTG 5046 Score = 91.5 bits (100), Expect = 3e-13 Identities = 143/202 (71%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| ||||| || || ||||| | ||||| |||| | ||| ||||||||||| | || Sbjct 4334 GTGAAGAGTGGATTCTTTTTGAATATTGTAATCAGAAAGAGTTCTTCCATCTTCTAATTG 4275 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 || || || || || ||||| || ||||| || ||| |||||| || || || || Sbjct 4274 TTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTATCTTGGAT-TT 4216 Query 199546 TTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCG 199604 | || || || ||| | ||||| | | ||| || || | || || |||||||| | Sbjct 4215 TAGCTTTGACATTTTCAATTGTGTCAGAAGATTCAACTTCAAGAGTAATGGTCTTACCAG 4156 Query 199605 TGAGAGTTTTCACAAAAATTTG 199626 | | |||||| ||||| ||||| Sbjct 4155 TTAAAGTTTTAACAAAGATTTG 4134 Score = 91.5 bits (100), Expect = 3e-13 Identities = 143/202 (71%), Gaps = 2/202 (1%) Strand=Plus/Minus Query 199426 GTGGAGAGTCGACTCCTTTTGGACGTTGTAGTCAGCCAAAGTCCTTCCATCTTCCAGCTG 199485 ||| ||||| || || ||||| | ||||| |||| | ||| ||||||||||| | || Sbjct 4790 GTGAAGAGTAGATTCTTTTTGAATATTGTAATCAGAAAGAGTTCTTCCATCTTCTAATTG 4731 Query 199486 CTTTCCGGCGAAGATGAGACGCTGCTGGTCCGGAAAAATTCCTTCTCGCTCCTGAATCTT 199545 || || || || || ||||| || ||||| || ||| |||||| || ||||| || Sbjct 4730 TTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTATCTTGAAT-TT 4672 Query 199546 TTGC-TTCACGGATTCGACGGTGTCTGTTGTTTCTACATCCAACGTGATCGTCTTACCCG 199604 | || || || ||| | || || | | ||| || || | || || |||||||| | Sbjct 4671 TAGCTTTAACATTTTCAATAGTATCAGAGGATTCAACTTCAAGAGTAATGGTCTTACCAG 4612 Query 199605 TGAGAGTTTTCACAAAAATTTG 199626 | | |||||| ||||| ||||| Sbjct 4611 TTAAAGTTTTAACAAAGATTTG 4590 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1178894124126873