Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neocallimastix_20californiae_20[genbank_20GCA_5F002104975.1_202017- 04-20] 1,819 sequences; 193,032,486 total letters Query= NC_018855.1 Length=169158 Score E Sequences producing significant alignments: (Bits) Value seq413 82.4 8e-11 >seq413 Length=437716 Score = 82.4 bits (90), Expect = 8e-11 Identities = 119/167 (71%), Gaps = 6/167 (4%) Strand=Plus/Plus Query 43722 GGTGGTCAACACCTGAACGTTAACGTTCTGCGTCGTGAAACTCTGGAAGATGCAGTTAAG 43781 |||| ||| || || |||||||||||||| ||||||||| | |||||||| | Sbjct 217884 GGTGCTCACCATCTTAACGTTAACGTTCTCAACCGTGAAACTTTAGAAGATGCCATGGCT 217943 Query 43782 CATCCGGAAAAATATCCGCAGCTGACCATCCGTGTATCCGGTTATGCAGTTCGCT---TT 43838 || || ||||| ||||| | || || || ||||| || |||||||| ||| || || Sbjct 217944 CACCCAGAAAACTATCCAAATCTTACTATTCGTGTCTCTGGTTATGCCGTTAACTTTGTT 218003 Query 43839 AACTCTCTGACTCCGGAACAGCAGCGCGACGTTATCGCTCGGACATT 43885 || | | ||||| || || || | || ||||| ||||| || || Sbjct 218004 AAAT---TAACTCCAGATCAACAAAGAGAAGTTATTGCTCGTACTTT 218047 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 541165294974320