Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neocallimastix_20californiae_20[genbank_20GCA_5F002104975.1_202017- 04-20] 1,819 sequences; 193,032,486 total letters Query= NC_021924.1 Length=129052 Score E Sequences producing significant alignments: (Bits) Value seq585 114 1e-20 seq1265 113 4e-20 seq1232 104 2e-17 seq1454 89.7 4e-13 >seq585 Length=8358 Score = 114 bits (126), Expect = 1e-20 Identities = 171/242 (71%), Gaps = 2/242 (1%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| ||||| ||||||||||| || || |||||||| | ||| || | Sbjct 5043 ATGCAAATCTTTGTTAAAACTTTAACTGGTAAGACCATTACTCTTGAAGTTGAATCCTCT 5102 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 |||||| | | | || ||| || ||| || |||||||| | || || ||| Sbjct 5103 GATACTATTGAAAATGTTAAAGCTAAAATTCAAGATAAAGAAGGTATTCCACCAGACCAA 5162 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | ||||||| ||| |||||||| | || |||| ||||| | | |||||||| Sbjct 5163 CAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGAAGAACTCTTTCTGATTACAAT 5222 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAAA--AAATAAAT 110510 |||||||||||||| || | ||| | || ||| | || || || ||||| ||||| || Sbjct 5223 ATTCAAAAAGAATCCACTCTTCACTTAGTCTTACGTCTTCGTGGTGGAAATTAAATATAT 5282 Query 110511 AA 110512 || Sbjct 5283 AA 5284 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| ||||| ||||||||||| || || |||||||| | ||| || | Sbjct 4587 ATGCAAATCTTTGTTAAAACTTTAACTGGTAAGACCATTACTCTTGAAGTTGAATCCTCT 4646 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 |||||| | | | || ||| || ||| || |||||||| | || || ||| Sbjct 4647 GATACTATTGAAAATGTTAAAGCTAAAATTCAAGATAAAGAAGGTATTCCACCAGACCAA 4706 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | ||||||| ||| |||||||| | || |||| ||||| | | |||||||| Sbjct 4707 CAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGAAGAACTCTTTCTGATTACAAT 4766 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||||||||||||||| | ||| | || ||| | || || || || Sbjct 4767 ATTCAAAAAGAATCTACTCTTCACTTAGTTTTACGTCTTCGTGGTGG 4813 Score = 98.7 bits (108), Expect = 8e-16 Identities = 162/231 (70%), Gaps = 2/231 (1%) Strand=Plus/Plus Query 110270 AAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAG-CC 110328 ||||||||||| || || || |||||||| || ||||| ||||| | ||| || || Sbjct 3900 AAAATGCAAATCTTCGTTAAGACTTTAACTGGTAAAACTATTACTCTTGAAGTTGAATCC 3959 Query 110329 TGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGA 110388 | | |||||| | | | || ||| || || || |||||||| | || || Sbjct 3960 TCA-GATACTATTGAAAATGTCAAAGCTAAAATCCAAGATAAAGAAGGTATTCCACCAGA 4018 Query 110389 TCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTA 110448 |||||| | ||||||| ||| |||||||| | || |||| ||||| | | ||||| Sbjct 4019 CCAACAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGAAGAACTCTTTCTGATTA 4078 Query 110449 CAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 || ||||||||||||||||| | ||| | || ||| | || || || || Sbjct 4079 TAATATTCAAAAAGAATCTACTCTTCACTTAGTTTTACGTCTTCGTGGTGG 4129 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| || || || |||||||| || ||||| ||||| | ||| || | Sbjct 4359 ATGCAAATCTTCGTTAAGACTTTAACTGGTAAAACTATTACTCTTGAAGTTGAATCCTCT 4418 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 |||||| | | | || ||| || ||| || |||||||| | || || ||| Sbjct 4419 GATACTATTGAAAATGTTAAAGCTAAAATTCAAGATAAAGAAGGTATTCCACCAGACCAA 4478 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | ||||||| ||| |||||||| | || |||| ||||| | | |||||||| Sbjct 4479 CAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGAAGAACTCTTTCTGATTACAAT 4538 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||||||||||||||| | ||| | || ||| | || || || || Sbjct 4539 ATTCAAAAAGAATCTACTCTTCACTTAGTTTTACGTCTTCGTGGTGG 4585 Score = 98.7 bits (108), Expect = 8e-16 Identities = 158/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| || || || |||||||| || ||||| ||||| | ||| || | Sbjct 4815 ATGCAAATCTTCGTTAAGACTTTAACTGGTAAAACTATTACTCTTGAAGTTGAATCCTCT 4874 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 |||||| | | | || ||| || ||| || |||||||| | || || ||| Sbjct 4875 GATACTATTGAAAATGTTAAAGCTAAAATTCAAGATAAAGAAGGTATTCCACCAGACCAA 4934 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | ||||||| ||| |||||||| | || |||| ||||| | | |||||||| Sbjct 4935 CAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGAAGAACTCTTTCTGATTACAAT 4994 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||||||||||||||| | ||| | || ||| | || || || || Sbjct 4995 ATTCAAAAAGAATCTACTCTTCACTTAGTTTTACGTCTTCGTGGTGG 5041 >seq1265 Length=1280584 Score = 113 bits (124), Expect = 4e-20 Identities = 169/239 (71%), Gaps = 2/239 (1%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| |||||||| |||||||| || || ||||||||| | ||| || || Sbjct 264701 ATGCAAATTTTTGTCAAGACTTTAACTGGAAAGACCATTACCCTTGAAGTTGAATCTTCT 264642 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| | | | || || |||||| || |||||||| | || |||||| Sbjct 264641 GATACCATTGAAAATGTCAAGGCCAAGATTCAAGATAAAGAAGGTATCCCACCAGATCAA 264582 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | ||||||| ||| || ||||| | || |||| ||||| | | ||||| || Sbjct 264581 CAACGTCTTATTTTTGCAGGAAAACAATTAGAAGATGGTAGAACTCTTTCAGATTATAAT 264522 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAAA--AAATAAA 110509 ||||||||||||||||| | ||| | || ||| | || || || ||| | ||||||| Sbjct 264521 ATTCAAAAAGAATCTACTCTTCACTTAGTTTTACGTCTACGTGGAGGATATTAAATAAA 264463 Score = 111 bits (122), Expect = 1e-19 Identities = 145/201 (72%), Gaps = 0/201 (0%) Strand=Plus/Minus Query 110269 TAAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCC 110328 |||||||||||| ||||| ||||||||||| || || || || || | ||| || | Sbjct 265845 TAAAATGCAAATTTTTGTTAAAACTTTAACTGGAAAGACTATCACTTTAGAAGTTGAATC 265786 Query 110329 TGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGA 110388 | |||||| | | | || ||| |||||| || |||||||| | || || Sbjct 265785 TTCTGATACTATTGAAAATGTCAAAGCTAAGATTCAAGATAAAGAAGGTATTCCACCAGA 265726 Query 110389 TCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTA 110448 |||||| | ||||||| ||| |||||||| | || |||| ||||| | | ||||| Sbjct 265725 CCAACAACGTCTTATTTTTGCAGGTAAACAATTAGAAGATGGTAGAACTCTTTCTGATTA 265666 Query 110449 CAACATTCAAAAAGAATCTAC 110469 ||| ||||||||||||||||| Sbjct 265665 CAATATTCAAAAAGAATCTAC 265645 Score = 107 bits (118), Expect = 2e-18 Identities = 160/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| |||||||| |||||||| || || ||||||||| | ||| || || Sbjct 260891 ATGCAAATTTTTGTCAAGACTTTAACTGGAAAGACCATTACCCTTGAAGTTGAATCTTCT 260832 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| | | | || || |||||| || |||||||| | || |||||| Sbjct 260831 GATACCATTGAAAATGTCAAGGCCAAGATTCAAGATAAAGAAGGTATTCCACCAGATCAA 260772 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | ||||||| ||| || ||||| | || |||| ||||| | | ||||| || Sbjct 260771 CAACGTCTTATTTTTGCAGGAAAACAATTAGAAGATGGTAGAACTCTTTCAGATTATAAT 260712 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||||||||||||||||| | ||| | || ||| | || || || || Sbjct 260711 ATTCAAAAAGAATCTACTCTTCACTTAGTTTTACGTCTTCGTGGTGG 260665 Score = 107 bits (118), Expect = 2e-18 Identities = 146/204 (72%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 110266 ATTTAAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGA 110325 || |||||||||||| |||||||| |||||||| || || ||||| || | ||| || Sbjct 261354 ATATAAAATGCAAATTTTTGTCAAGACTTTAACTGGTAAGACCATCACTTTAGAAGTTGA 261295 Query 110326 GCCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGT 110385 || |||||| | | | || ||| || ||| || |||||||| | || Sbjct 261294 ATCTTCTGATACTATTGAAAATGTCAAAGCTAAAATTCAAGATAAAGAAGGTATCCCACC 261235 Query 110386 GGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGA 110445 ||||||||| | ||||||| ||| || ||||| | || |||| ||||| | | || Sbjct 261234 AGATCAACAACGTCTTATTTTTGCAGGAAAACAATTAGAAGATGGTAGAACTCTTTCAGA 261175 Query 110446 TTACAACATTCAAAAAGAATCTAC 110469 ||| || ||||||||||||||||| Sbjct 261174 TTATAATATTCAAAAAGAATCTAC 261151 Score = 104 bits (114), Expect = 2e-17 Identities = 161/230 (70%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| |||||||| |||||||| || || ||||| || | ||| || || Sbjct 257253 ATGCAAATTTTTGTCAAGACTTTAACTGGTAAGACCATCACTTTAGAAGTTGAATCTTCT 257194 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 |||||| | | | || ||| |||||| || |||||||| | || || ||| Sbjct 257193 GATACTATTGAAAATGTCAAAGCTAAGATTCAGGATAAAGAAGGTATCCCACCAGACCAA 257134 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | ||||||| ||| || ||||| | || |||| ||||| | | ||||| || Sbjct 257133 CAACGTCTTATTTTTGCAGGAAAACAATTAGAAGATGGAAGAACTCTTTCAGATTATAAT 257074 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAAA 110502 ||||||||||||||||| | || | || ||| | || || || ||||| Sbjct 257073 ATTCAAAAAGAATCTACTCTTCATTTAGTATTACGTCTTCGTGGAGGAAA 257024 Score = 104 bits (114), Expect = 2e-17 Identities = 141/197 (72%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| |||||||| |||||||| || || ||||||||| | ||| || || Sbjct 265157 ATGCAAATTTTTGTCAAGACTTTAACTGGAAAGACCATTACCCTTGAAGTTGAATCTTCT 265098 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| | | | || || |||||| || |||||||| | || |||||| Sbjct 265097 GATACCATTGAAAATGTCAAGGCCAAGATTCAAGATAAAGAAGGTATTCCACCAGATCAA 265038 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | ||||||| ||| || ||||| | || |||| ||||| | | |||||||| Sbjct 265037 CAACGTCTTATTTTTGCAGGAAAACAATTAGAAGATGGAAGAACTCTTTCTGATTACAAT 264978 Query 110453 ATTCAAAAAGAATCTAC 110469 |||||||||||||| || Sbjct 264977 ATTCAAAAAGAATCCAC 264961 Score = 98.7 bits (108), Expect = 8e-16 Identities = 144/204 (71%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 110266 ATTTAAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGA 110325 || |||||||||||| |||||||| |||||||| || || ||||| || | ||| || Sbjct 257716 ATATAAAATGCAAATTTTTGTCAAGACTTTAACTGGTAAGACCATCACTTTAGAAGTTGA 257657 Query 110326 GCCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGT 110385 || ||||| | | | || ||| || ||| || |||||||| | || Sbjct 257656 ATCTTCTGATACCATTGAAAATGTCAAAGCTAAAATTCAAGATAAAGAAGGTATCCCACC 257597 Query 110386 GGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGA 110445 ||||||||| | ||||||| ||| || ||||| | || |||| ||||| | | || Sbjct 257596 AGATCAACAACGTCTTATTTTTGCAGGAAAACAATTAGAAGATGGTAGAACTCTTTCAGA 257537 Query 110446 TTACAACATTCAAAAAGAATCTAC 110469 ||| || |||||||||||||| || Sbjct 257536 TTATAATATTCAAAAAGAATCCAC 257513 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| ||||| ||||||||||| || || || || || | ||| || || Sbjct 261119 ATGCAAATTTTTGTTAAAACTTTAACTGGAAAGACAATCACTTTAGAAGTTGAATCTTCT 261060 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| | | | || ||| |||||| || |||||||| | || |||||| Sbjct 261059 GATACCATTGAAAATGTCAAAGCAAAGATTCAAGATAAAGAAGGTATCCCTCCAGATCAA 261000 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | ||||||| ||| |||||||| | || |||| ||||| | | ||||| || Sbjct 260999 CAACGTCTTATTTTTGCAGGTAAACAATTAGAAGATGGTAGAACTCTTTCAGATTATAAT 260940 Query 110453 ATTCAAAAAGAATCTAC 110469 ||||||||||||||||| Sbjct 260939 ATTCAAAAAGAATCTAC 260923 Score = 98.7 bits (108), Expect = 8e-16 Identities = 140/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| |||||||| |||||||| || || ||||||||| | ||| || || Sbjct 265385 ATGCAAATTTTTGTCAAGACTTTAACTGGAAAGACCATTACCCTTGAAGTTGAATCTTCT 265326 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| || | | || ||| || ||| || |||||||| | || |||||| Sbjct 265325 GATACCGTTGAAAATGTCAAAGCTAAAATTCAAGATAAAGAAGGTATTCCACCAGATCAA 265266 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | ||||||| ||| |||||||| | || |||| | || | | ||||| || Sbjct 265265 CAACGTCTTATTTTTGCAGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTATAAT 265206 Query 110453 ATTCAAAAAGAATCTAC 110469 |||||||||||||| || Sbjct 265205 ATTCAAAAAGAATCCAC 265189 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| |||||||| |||||||| || || ||||||||| | ||| || || Sbjct 264929 ATGCAAATTTTTGTCAAGACTTTAACTGGAAAGACCATTACCCTTGAAGTTGAATCTTCT 264870 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| | | | || ||| || ||| || |||||||| | || |||||| Sbjct 264869 GATACCATTGAAAATGTCAAAGCTAAAATTCAAGATAAAGAAGGTATCCCACCAGATCAA 264810 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | ||||||| ||| |||||||| | || |||| | || | | ||||| || Sbjct 264809 CAACGTCTTATTTTTGCAGGTAAACAATTAGAAGATGGTCGTACTCTTTCAGATTATAAT 264750 Query 110453 ATTCAAAAAGAATCTAC 110469 |||||||||||||| || Sbjct 264749 ATTCAAAAAGAATCCAC 264733 Score = 87.8 bits (96), Expect = 1e-12 Identities = 158/230 (69%), Gaps = 1/230 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| ||||| ||||||||||| || || | || || | ||| || || Sbjct 260663 ATGCAAATTTTTGTTAAAACTTTAACTGGAAAGTCAATCACTTTAGAAGTTGAATCTTCT 260604 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 |||||| | | | || ||| || ||| || |||||||| | || |||||| Sbjct 260603 GATACTATTGAAAATGTCAAAGCTAAAATTCAAGATAAAGAAGGTATCCCTCCAGATCAA 260544 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | ||||||| ||| |||||||| | || |||| ||||| | | ||||| || Sbjct 260543 CAACGTCTTATTTTTGCAGGTAAACAATTAGAAGATGGAAGAACTCTTTCAGATTATAAT 260484 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAAA 110502 | || |||||||||||| | || | || ||| | || || || ||||| Sbjct 260483 A-TCCAAAAGAATCTACTCTTCATTTAGTTTTACGTCTTCGTGGAGGAAA 260435 >seq1232 Length=735369 Score = 104 bits (114), Expect = 2e-17 Identities = 159/227 (70%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| || || || |||||||| || ||||||||||| | ||| || || Sbjct 63062 ATGCAAATCTTCGTTAAGACTTTAACTGGTAAAACCATTACTCTTGAAGTTGAATCTTCT 63121 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 |||||| | | | || ||| || ||| || || ||||| | || || ||| Sbjct 63122 GATACTATTGAAAATGTCAAAGCTAAAATTCAAGATAAGGAAGGTATTCCACCAGACCAA 63181 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | ||||||| ||| |||||||| | || |||| ||||| | | ||||||||| Sbjct 63182 CAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGTAGAACTCTTTCTGATTACAAC 63241 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||||| |||||||| | ||| | || ||| | || || || || Sbjct 63242 ATTCAAAAGGAATCTACTCTCCACTTAGTCTTACGTCTTCGTGGTGG 63288 Score = 98.7 bits (108), Expect = 8e-16 Identities = 162/234 (69%), Gaps = 0/234 (0%) Strand=Plus/Plus Query 110266 ATTTAAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGA 110325 ||| ||||||||||| || || || |||||||| || ||||||||||| | ||| || Sbjct 61459 ATTCAAAATGCAAATCTTCGTAAAGACTTTAACTGGTAAAACCATTACTCTTGAAGTTGA 61518 Query 110326 GCCTGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGT 110385 || |||||| | | | || ||| || ||| || || ||||| | || Sbjct 61519 ATCTTCTGATACTATTGAAAATGTCAAAGCTAAAATTCAAGATAAGGAAGGTATTCCACC 61578 Query 110386 GGATCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGA 110445 || |||||| | ||||||| ||| ||||| || | || |||| ||||| | | || Sbjct 61579 AGACCAACAACGTCTTATTTTTGCTGGTAAGCAATTAGAAGATGGTAGAACTCTTTCTGA 61638 Query 110446 TTACAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 ||| || |||||||| |||||||| | ||| | || ||| | || || || || Sbjct 61639 TTATAATATTCAAAAGGAATCTACTCTCCACTTAGTCTTACGTCTTCGTGGTGG 61692 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| || || || || ||||| || || |||||||| | ||| || || Sbjct 61694 ATGCAAATCTTCGTTAAGACATTAACTGGTAAGACCATTACTCTTGAAGTTGAATCTTCT 61753 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 |||||| | | | || ||| || ||| || || ||||| | || || ||| Sbjct 61754 GATACTATTGAAAATGTCAAAGCTAAAATTCAAGATAAGGAAGGTATTCCACCAGACCAA 61813 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | ||||||| ||| |||||||| | || |||| ||||| | | ||||||||| Sbjct 61814 CAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGTAGAACTCTTTCTGATTACAAC 61873 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||||| |||||||| | ||| | || ||| | || || || || Sbjct 61874 ATTCAAAAGGAATCTACTCTCCACTTAGTCTTACGTCTTCGTGGTGG 61920 Score = 95.1 bits (104), Expect = 1e-14 Identities = 157/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| || || || |||||||| || ||||||||||| | ||| || || Sbjct 62834 ATGCAAATCTTCGTTAAGACTTTAACTGGTAAAACCATTACTCTTGAAGTTGAATCTTCT 62893 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 |||||| | | | || ||| || ||| || || ||||| | || || ||| Sbjct 62894 GATACTATTGAAAATGTCAAAGCTAAAATTCAAGATAAGGAAGGTATTCCACCAGACCAA 62953 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | ||||| | ||| |||||||| | || |||| ||||| | | |||||||| Sbjct 62954 CAACGTCTTATCTTTGCTGGTAAACAATTAGAAGATGGTAGAACTCTTTCTGATTACAAT 63013 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||||| |||||||| | ||| | || ||| | || || || || Sbjct 63014 ATTCAAAAGGAATCTACTCTCCACTTAGTCTTACGTCTTCGTGGTGG 63060 >seq1454 Length=643854 Score = 89.7 bits (98), Expect = 4e-13 Identities = 156/227 (69%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| ||||| ||||||||||| || || || |||||| | ||| || || Sbjct 190854 ATGCAAATTTTTGTTAAAACTTTAACTGGTAAGACTATTACCCTTGAAGTTGAATCTTCT 190795 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 |||||| | | | || || || ||| || || ||||| | || |||||| Sbjct 190794 GATACTATTGAAAATGTTAAGGCTAAAATTCAAGATAAGGAAGGTATTCCACCAGATCAA 190735 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | ||||||| ||| ||||| || | || |||| | || | | |||||||| Sbjct 190734 CAACGTCTTATTTTTGCAGGTAAGCAATTAGAAGATGGTCGTACTCTTTCTGATTACAAT 190675 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||||| |||||||| | ||| | || ||| | || || || || Sbjct 190674 ATTCAAAAGGAATCTACTCTTCACTTAGTATTACGTCTTCGTGGTGG 190628 Score = 89.7 bits (98), Expect = 4e-13 Identities = 165/241 (68%), Gaps = 1/241 (0%) Strand=Plus/Plus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| ||||| ||||||||||| || || || || || | ||| || || Sbjct 198031 ATGCAAATTTTTGTTAAAACTTTAACTGGTAAGACTATCACTCTTGAAGTTGAATCTTCT 198090 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| | | | || || |||||| || || ||||| | || |||||| Sbjct 198091 GATACCATTGAAAATGTTAAGGCTAAGATTCAAGATAAGGAAGGTATTCCACCAGATCAA 198150 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | ||||||| ||| ||||| || | || |||| | || | | |||||||| Sbjct 198151 CAACGTCTTATTTTTGCAGGTAAGCAATTAGAAGATGGTCGTACTCTTTCTGATTACAAT 198210 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAAA-AAATAAATA 110511 |||||||| |||||||| | ||| | || ||| | || || || ||||| || ||||| Sbjct 198211 ATTCAAAAGGAATCTACTCTACACTTAGTTTTACGTCTTCGTGGTGGAAATTAAAAAATA 198270 Query 110512 A 110512 | Sbjct 198271 A 198271 Score = 86.0 bits (94), Expect = 5e-12 Identities = 155/227 (68%), Gaps = 0/227 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| ||||| || |||||||| || || || || || | ||| || || | Sbjct 191082 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAGACTATCACTCTTGAAGTTGAATCTTCC 191023 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 |||||| | | | || || |||||| || || ||||| | || |||||| Sbjct 191022 GATACTATTGAAAATGTTAAGGCTAAGATTCAAGATAAGGAAGGTATTCCACCAGATCAA 190963 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | ||||||| ||| ||||| || | || |||| | || | | ||||||||| Sbjct 190962 CAACGTCTTATTTTTGCAGGTAAGCAATTAGAAGATGGTCGTACTCTTTCTGATTACAAC 190903 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||||| ||||| || | ||| | || ||| | || || || || Sbjct 190902 ATTCAAAAGGAATCCACTCTTCACTTAGTTTTACGTCTTCGTGGTGG 190856 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 110269 TAAAATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCC 110328 |||||||||||| || || || || ||||| || || || ||||| | ||| || | Sbjct 191314 TAAAATGCAAATTTTCGTAAAGACATTAACTGGTAAGACTATTACTTTAGAAGTTGAATC 191255 Query 110329 TGACGATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGA 110388 | |||||| | | | || || |||||| || || ||||| | || || Sbjct 191254 TTCTGATACTATTGAAAATGTTAAGGCTAAGATTCAAGATAAGGAAGGTATTCCACCAGA 191195 Query 110389 TCAACAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTA 110448 ||||||| | ||||||| ||| ||||| || | || |||| | || | | ||||| Sbjct 191194 TCAACAACGTCTTATTTTTGCAGGTAAGCAATTAGAAGATGGTCGTACTCTTTCTGATTA 191135 Query 110449 CAACATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGG 110499 |||||||||||| ||||| || | ||| | || ||| | || || || || Sbjct 191134 CAACATTCAAAAGGAATCCACTCTTCACTTAGTTTTACGTCTTCGTGGTGG 191084 Score = 82.4 bits (90), Expect = 6e-11 Identities = 156/230 (68%), Gaps = 0/230 (0%) Strand=Plus/Minus Query 110273 ATGCAAATATTTGTCAAAACTTTAACCGGCAAAACCATTACCGTCGAAACGGAGCCTGAC 110332 |||||||| ||||| || |||||||| || || || || ||| | ||| || || Sbjct 189942 ATGCAAATTTTTGTTAAGACTTTAACTGGTAAGACTATCACCTTAGAAGTTGAATCTTCT 189883 Query 110333 GATACTGTCGGCCAGGTAAAACAGAAGATTGCCGACAAAGAAGGCGTGCCCGTGGATCAA 110392 ||||| | | | || || |||||| || || ||||| | || |||||| Sbjct 189882 GATACCATTGAAAATGTTAAGGCTAAGATTCAAGATAAGGAAGGTATTCCACCAGATCAA 189823 Query 110393 CAAAGACTTATTTATGCGGGTAAACAGCTGGAGGATGCCAGAACAATGGCGGATTACAAC 110452 ||| | ||||||| ||| ||||| || | || |||| | || | | ||||||||| Sbjct 189822 CAACGTCTTATTTTTGCTGGTAAGCAATTAGAAGATGGTCGTACTCTTTCTGATTACAAC 189763 Query 110453 ATTCAAAAAGAATCTACGTTGCACATGGTGTTAAGACTGCGAGGGGGAAA 110502 |||||||| ||||| || | || | || ||| | || || || ||||| Sbjct 189762 ATTCAAAAGGAATCCACTCTTCATTTAGTCTTACGTCTTCGTGGAGGAAA 189713 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 412832447688767