Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neocallimastix_20californiae_20[genbank_20GCA_5F002104975.1_202017- 04-20] 1,819 sequences; 193,032,486 total letters Query= NC_028762.1 Length=161989 Score E Sequences producing significant alignments: (Bits) Value seq313 86.0 6e-12 >seq313 Length=466657 Score = 86.0 bits (94), Expect = 6e-12 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 55596 TGACGGCATACCCAGAAACGCGAATTGTTAATTGTGGATATTTTTCAGGATGTTCTTTAG 55655 |||||||||| |||||||| ||||| || | | |||||| ||||||||||| | ||| Sbjct 153401 TGACGGCATAACCAGAAACACGAATAGTAAGGTTTGGATAGTTTTCAGGATGAGCCATAG 153460 Query 55656 CATCTAACAACATTTCTTTATTAAGAACATTGACATTCAGATGTTGTCCACC 55707 ||||| || |||| ||||||||||| ||||| ||||| || |||| Sbjct 153461 CATCTTCTAAAGTTTCACGCTTAAGAACATTAACATTAAGATGGTGAGCACC 153512 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 518225016590760