Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neocallimastix_20californiae_20[genbank_20GCA_5F002104975.1_202017- 04-20] 1,819 sequences; 193,032,486 total letters Query= NC_028773.1 Length=182145 Score E Sequences producing significant alignments: (Bits) Value seq313 95.1 1e-14 seq691 93.3 5e-14 seq236 91.5 2e-13 seq1676 87.8 2e-12 seq1066 87.8 2e-12 seq1721 86.0 7e-12 seq1043 86.0 7e-12 seq1088 84.2 3e-11 seq1032 84.2 3e-11 seq324 82.4 9e-11 seq2 82.4 9e-11 >seq313 Length=466657 Score = 95.1 bits (104), Expect = 1e-14 Identities = 84/105 (80%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 125494 TCAGCATCTTAATGTCAATGTTCTGAATCGTGAAACGCTTCAAGATGCAGTAAAACATCC 125553 ||| ||||||||||| |||||||| || |||||||| | ||||||| | ||||| Sbjct 153507 TCACCATCTTAATGTTAATGTTCTTAAGCGTGAAACTTTAGAAGATGCTATGGCTCATCC 153448 Query 125554 TGAAAAATATCCTCAACTGACCATTCGTGTTTCTGGTTATGCAGT 125598 |||||| ||||| | || || |||||||||||||||||||| || Sbjct 153447 TGAAAACTATCCAAACCTTACTATTCGTGTTTCTGGTTATGCCGT 153403 >seq691 Length=385463 Score = 93.3 bits (102), Expect = 5e-14 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 125494 TCAGCATCTTAATGTCAATGTTCTGAATCGTGAAACGCTTCAAGATGCAGTAAAACATCC 125553 ||| ||||||||||| |||||||| || |||||||| | ||||||| | |||| || Sbjct 88689 TCACCATCTTAATGTTAATGTTCTTAAACGTGAAACCTTAGAAGATGCTATGGAACACCC 88630 Query 125554 TGAAAAATATCCTCAACTGACCATTCGTGTTTCTGGTTATGCAGTT 125599 ||||| ||||| | || || ||||||||||||||||| || ||| Sbjct 88629 AGAAAACTATCCAAACCTTACTATTCGTGTTTCTGGTTACGCTGTT 88584 Score = 93.3 bits (102), Expect = 5e-14 Identities = 84/106 (79%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 125494 TCAGCATCTTAATGTCAATGTTCTGAATCGTGAAACGCTTCAAGATGCAGTAAAACATCC 125553 ||| ||||||||||| |||||||| || |||||||| | ||||||| | |||| || Sbjct 98602 TCACCATCTTAATGTTAATGTTCTTAAACGTGAAACCTTAGAAGATGCTATGGAACACCC 98661 Query 125554 TGAAAAATATCCTCAACTGACCATTCGTGTTTCTGGTTATGCAGTT 125599 ||||| ||||| | || || ||||||||||||||||| || ||| Sbjct 98662 AGAAAACTATCCAAACCTTACTATTCGTGTTTCTGGTTACGCTGTT 98707 >seq236 Length=489515 Score = 91.5 bits (100), Expect = 2e-13 Identities = 83/105 (79%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 125494 TCAGCATCTTAATGTCAATGTTCTGAATCGTGAAACGCTTCAAGATGCAGTAAAACATCC 125553 ||| ||||||||||| |||||||| || |||||||| | |||||||| | ||||| Sbjct 435675 TCACCATCTTAATGTTAATGTTCTTAAGCGTGAAACTTTAGAAGATGCAATGGCTCATCC 435734 Query 125554 TGAAAAATATCCTCAACTGACCATTCGTGTTTCTGGTTATGCAGT 125598 ||||| ||||| | || || ||||||||||| |||||||| || Sbjct 435735 AGAAAACTATCCAAATCTTACTATTCGTGTTTCCGGTTATGCTGT 435779 >seq1676 Length=585574 Score = 87.8 bits (96), Expect = 2e-12 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 125494 TCAGCATCTTAATGTCAATGTTCTGAATCGTGAAACGCTTCAAGATGCAGTAAAACATCC 125553 ||| || ||||| ||||||||||| || |||||||| | ||||||| | ||||| Sbjct 517559 TCACCACCTTAACGTCAATGTTCTTAAGCGTGAAACTTTAGAAGATGCCATGGCTCATCC 517500 Query 125554 TGAAAAATATCCTCAACTGACCATTCGTGTTTCTGGTTATGCAGTT 125599 ||||| ||||| | || || |||||||||||||||||||| ||| Sbjct 517499 AGAAAACTATCCAAACCTTACGATTCGTGTTTCTGGTTATGCCGTT 517454 Score = 87.8 bits (96), Expect = 2e-12 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 125494 TCAGCATCTTAATGTCAATGTTCTGAATCGTGAAACGCTTCAAGATGCAGTAAAACATCC 125553 ||| || ||||| ||||||||||| || |||||||| | ||||||| | ||||| Sbjct 527898 TCACCACCTTAACGTCAATGTTCTTAAGCGTGAAACTTTAGAAGATGCCATGGCTCATCC 527957 Query 125554 TGAAAAATATCCTCAACTGACCATTCGTGTTTCTGGTTATGCAGTT 125599 ||||| ||||| | || || |||||||||||||||||||| ||| Sbjct 527958 AGAAAACTATCCAAACCTTACGATTCGTGTTTCTGGTTATGCCGTT 528003 >seq1066 Length=864523 Score = 87.8 bits (96), Expect = 2e-12 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 125494 TCAGCATCTTAATGTCAATGTTCTGAATCGTGAAACGCTTCAAGATGCAGTAAAACATCC 125553 ||| ||||||||||| |||||||| || |||||||| | ||||||| | |||||| Sbjct 794827 TCACCATCTTAATGTTAATGTTCTTAAACGTGAAACCTTAGAAGATGCTATGGCACATCC 794768 Query 125554 TGAAAAATATCCTCAACTGACCATTCGTGTTTCTGGTTATGCAGTT 125599 ||||| ||||| | || || ||||||||||| || ||||| ||| Sbjct 794767 AGAAAACTATCCAAATCTTACTATTCGTGTTTCAGGATATGCTGTT 794722 Score = 87.8 bits (96), Expect = 2e-12 Identities = 83/106 (78%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 125494 TCAGCATCTTAATGTCAATGTTCTGAATCGTGAAACGCTTCAAGATGCAGTAAAACATCC 125553 ||| ||||||||||| |||||||| || |||||||| | ||||||| | |||||| Sbjct 825790 TCACCATCTTAATGTTAATGTTCTTAAACGTGAAACCTTAGAAGATGCTATGGCACATCC 825849 Query 125554 TGAAAAATATCCTCAACTGACCATTCGTGTTTCTGGTTATGCAGTT 125599 ||||| ||||| | || || ||||||||||| || ||||| ||| Sbjct 825850 AGAAAACTATCCAAATCTTACTATTCGTGTTTCAGGATATGCTGTT 825895 >seq1721 Length=570012 Score = 86.0 bits (94), Expect = 7e-12 Identities = 86/112 (77%), Gaps = 0/112 (0%) Strand=Plus/Plus Query 125487 AAGGCGGTCAGCATCTTAATGTCAATGTTCTGAATCGTGAAACGCTTCAAGATGCAGTAA 125546 |||| | || ||||||||||| |||||||| || |||||||| | |||||||| | Sbjct 380004 AAGGAGCCCATCATCTTAATGTTAATGTTCTTAAGCGTGAAACCTTAGAAGATGCAATGG 380063 Query 125547 AACATCCTGAAAAATATCCTCAACTGACCATTCGTGTTTCTGGTTATGCAGT 125598 || || ||||| ||||| | | |||||||||||||||||||| || || Sbjct 380064 CTCACCCAGAAAACTATCCAAACTTAACCATTCGTGTTTCTGGTTACGCTGT 380115 >seq1043 Length=1347342 Score = 86.0 bits (94), Expect = 7e-12 Identities = 82/105 (78%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 125494 TCAGCATCTTAATGTCAATGTTCTGAATCGTGAAACGCTTCAAGATGCAGTAAAACATCC 125553 ||| ||||||||||| |||||||| || |||||||| | ||||||| | ||||| Sbjct 637246 TCACCATCTTAATGTTAATGTTCTTAAGCGTGAAACTTTAGAAGATGCCATGGCTCATCC 637305 Query 125554 TGAAAAATATCCTCAACTGACCATTCGTGTTTCTGGTTATGCAGT 125598 ||||| ||||| | || || ||||||||||| |||||||| || Sbjct 637306 AGAAAACTATCCAAATCTTACTATTCGTGTTTCAGGTTATGCTGT 637350 >seq1088 Length=861023 Score = 84.2 bits (92), Expect = 3e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Plus Query 125494 TCAGCATCTTAATGTCAATGTTCTGAATCGTGAAACGCTTCAAGATGCAGTAAAACATCC 125553 ||| ||||||||||| |||||||| || |||||||| | ||||||| | ||||| Sbjct 440097 TCACCATCTTAATGTTAATGTTCTTAAGCGTGAAACTTTAGAAGATGCTATGGCTCATCC 440156 Query 125554 TGAAAAATATCCTCAACTGACCATTCGTGTTTCTGGTTATGCAGTT 125599 ||||| ||||| | || || ||||||||||| ||||| || ||| Sbjct 440157 AGAAAACTATCCAAACCTTACTATTCGTGTTTCCGGTTACGCTGTT 440202 >seq1032 Length=894662 Score = 84.2 bits (92), Expect = 3e-11 Identities = 82/106 (77%), Gaps = 0/106 (0%) Strand=Plus/Minus Query 125494 TCAGCATCTTAATGTCAATGTTCTGAATCGTGAAACGCTTCAAGATGCAGTAAAACATCC 125553 ||| ||||||||||| || ||||| || |||||||| | ||||||| | || || Sbjct 446899 TCACCATCTTAATGTTAACGTTCTTAAGCGTGAAACCTTAGAAGATGCTATGGCTCACCC 446840 Query 125554 TGAAAAATATCCTCAACTGACCATTCGTGTTTCTGGTTATGCAGTT 125599 ||||| ||||| | || |||||||||||||||||||| || ||| Sbjct 446839 AGAAAACTATCCAAACCTTACCATTCGTGTTTCTGGTTACGCTGTT 446794 >seq324 Length=463316 Score = 82.4 bits (90), Expect = 9e-11 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Plus Query 125495 CAGCATCTTAATGTCAATGTTCTGAATCGTGAAACGCTTCAAGATGCAGTAAAACATCCT 125554 || ||||||||||| || ||||| || |||||||| | ||||||| | || || Sbjct 190149 CACCATCTTAATGTTAACGTTCTTAAGCGTGAAACCTTAGAAGATGCTATGGCTCACCCA 190208 Query 125555 GAAAAATATCCTCAACTGACCATTCGTGTTTCTGGTTATGCAGTT 125599 ||||| ||||| | || || |||||||||||||||||||| ||| Sbjct 190209 GAAAACTATCCAAACCTTACTATTCGTGTTTCTGGTTATGCTGTT 190253 >seq2 Length=1177924 Score = 82.4 bits (90), Expect = 9e-11 Identities = 81/105 (77%), Gaps = 0/105 (0%) Strand=Plus/Minus Query 125494 TCAGCATCTTAATGTCAATGTTCTGAATCGTGAAACGCTTCAAGATGCAGTAAAACATCC 125553 ||| ||||||||||| |||||||| || |||||||| | ||||||| | ||||| Sbjct 1170496 TCACCATCTTAATGTTAATGTTCTTAAACGTGAAACCTTAGAAGATGCTATGGCTCATCC 1170437 Query 125554 TGAAAAATATCCTCAACTGACCATTCGTGTTTCTGGTTATGCAGT 125598 ||||| ||||| | || || ||||||||||| || ||||| || Sbjct 1170436 AGAAAACTATCCAAACCTTACTATTCGTGTTTCAGGATATGCTGT 1170392 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 582722750040200