Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neocallimastix_20californiae_20[genbank_20GCA_5F002104975.1_202017- 04-20] 1,819 sequences; 193,032,486 total letters Query= NC_030240.1 Length=128058 Score E Sequences producing significant alignments: (Bits) Value seq585 116 3e-21 seq1265 105 5e-18 seq952 95.1 1e-14 seq1454 91.5 1e-13 seq1232 91.5 1e-13 >seq585 Length=8358 Score = 116 bits (128), Expect = 3e-21 Identities = 163/229 (71%), Gaps = 0/229 (0%) Strand=Plus/Minus Query 101026 TAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATC 101085 ||| || | ||| | ||| ||||||||||||||||| ||||| | | |||| | ||| Sbjct 4115 TAAAACTAAGTGAAGAGTAGATTCTTTTTGAATATTATAATCAGAAAGAGTTCTTCCATC 4056 Query 101086 TTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTC 101145 ||| |||||||| || ||| | ||||| | |||||||||| || | |||||||| || Sbjct 4055 TTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTATC 3996 Query 101146 GGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGT 101205 ||||| ||| |||| | | || |||| ||| ||| | |||||||| Sbjct 3995 TTGGATTTTAGCTTTGACATTTTCAATAGTATCTGAGGATTCAACTTCAAGAGTAATAGT 3936 Query 101206 TTTGCCCGTCAATGTTTTAATAAAAATTTGCATTATTACAATATATTTT 101254 ||| || || || || |||| || ||||||||| ||| ||| | |||| Sbjct 3935 TTTACCAGTTAAAGTCTTAACGAAGATTTGCATTTTTATAATTTCTTTT 3887 Score = 111 bits (122), Expect = 1e-19 Identities = 163/231 (71%), Gaps = 0/231 (0%) Strand=Plus/Minus Query 101008 ATTGCCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATC 101067 ||| || || || | | ||| || | ||| | ||| ||||||||||||||||||||||| Sbjct 5273 ATTTCCACCACGAAGACGTAAGACTAAGTGAAGAGTGGATTCTTTTTGAATATTGTAATC 5214 Query 101068 GGCCATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTAC 101127 | | |||| | |||||| |||||||| || ||| | ||||| | |||||||||| Sbjct 5213 AGAAAGAGTTCTTCCATCTTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGG 5154 Query 101128 GGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGT 101187 || | |||||||| || |||||| ||| |||| | | || || | ||| Sbjct 5153 TGGAATACCTTCTTTATCTTGAATTTTAGCTTTAACATTTTCAATAGTATCAGAGGATTC 5094 Query 101188 TGTTTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 ||| | ||||| || || || || || ||||||| ||| |||||||| Sbjct 5093 AACTTCAAGAGTAATGGTCTTACCAGTTAAAGTTTTAACAAAGATTTGCAT 5043 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 101026 TAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATC 101085 ||| || | ||| | ||| ||||||||||||||||||||||| | | |||| | ||| Sbjct 4571 TAAAACTAAGTGAAGAGTAGATTCTTTTTGAATATTGTAATCAGAAAGAGTTCTTCCATC 4512 Query 101086 TTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTC 101145 ||| |||||||| || ||| | ||||| | |||||||||| || | |||||||| || Sbjct 4511 TTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTATC 4452 Query 101146 GGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGT 101205 |||||| ||| |||| | | || || | ||| ||| | |||||||| Sbjct 4451 TTGAATTTTAGCTTTAACATTTTCAATAGTATCAGAGGATTCAACTTCAAGAGTAATAGT 4392 Query 101206 TTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 ||| || || || || |||| || |||||||| Sbjct 4391 TTTACCAGTTAAAGTCTTAACGAAGATTTGCAT 4359 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 101026 TAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATC 101085 ||| || | ||| | ||| ||||||||||||||||||||||| | | |||| | ||| Sbjct 4799 TAAAACTAAGTGAAGAGTAGATTCTTTTTGAATATTGTAATCAGAAAGAGTTCTTCCATC 4740 Query 101086 TTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTC 101145 ||| |||||||| || ||| | ||||| | |||||||||| || | |||||||| || Sbjct 4739 TTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTATC 4680 Query 101146 GGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGT 101205 |||||| ||| |||| | | || || | ||| ||| | ||||| || Sbjct 4679 TTGAATTTTAGCTTTAACATTTTCAATAGTATCAGAGGATTCAACTTCAAGAGTAATGGT 4620 Query 101206 TTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 || || || || ||||||| ||| |||||||| Sbjct 4619 CTTACCAGTTAAAGTTTTAACAAAGATTTGCAT 4587 Score = 109 bits (120), Expect = 4e-19 Identities = 152/213 (71%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 101026 TAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATC 101085 ||| || | ||| | ||| ||||||||||||||||||||||| | | |||| | ||| Sbjct 5027 TAAAACTAAGTGAAGAGTAGATTCTTTTTGAATATTGTAATCAGAAAGAGTTCTTCCATC 4968 Query 101086 TTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTC 101145 ||| |||||||| || ||| | ||||| | |||||||||| || | |||||||| || Sbjct 4967 TTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTATC 4908 Query 101146 GGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGT 101205 |||||| ||| |||| | | || || | ||| ||| | |||||||| Sbjct 4907 TTGAATTTTAGCTTTAACATTTTCAATAGTATCAGAGGATTCAACTTCAAGAGTAATAGT 4848 Query 101206 TTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 ||| || || || || |||| || |||||||| Sbjct 4847 TTTACCAGTTAAAGTCTTAACGAAGATTTGCAT 4815 Score = 100 bits (110), Expect = 2e-16 Identities = 150/213 (70%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 101026 TAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATC 101085 ||| || | ||| | ||| ||||||||||||||||||||||| | | |||| | ||| Sbjct 4343 TAAAACTAAGTGAAGAGTGGATTCTTTTTGAATATTGTAATCAGAAAGAGTTCTTCCATC 4284 Query 101086 TTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTC 101145 ||| |||||||| || ||| | ||||| | |||||||||| || | |||||||| || Sbjct 4283 TTCTAATTGTTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTATC 4224 Query 101146 GGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGT 101205 ||||| ||| |||| | | || || | || ||| | ||||| || Sbjct 4223 TTGGATTTTAGCTTTGACATTTTCAATTGTGTCAGAAGATTCAACTTCAAGAGTAATGGT 4164 Query 101206 TTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 || || || || ||||||| ||| |||||||| Sbjct 4163 CTTACCAGTTAAAGTTTTAACAAAGATTTGCAT 4131 >seq1265 Length=1280584 Score = 105 bits (116), Expect = 5e-18 Identities = 180/257 (70%), Gaps = 7/257 (3%) Strand=Plus/Plus Query 101035 GTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCCAATTG 101094 ||| | ||| ||||||||||||||||||||||| | | |||| | |||||| ||||| Sbjct 265638 GTGAAGAGTAGATTCTTTTTGAATATTGTAATCAGAAAGAGTTCTACCATCTTCTAATTG 265697 Query 101095 TTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCAATTTT 101154 ||| || ||| | ||||| | |||||||||| || | |||||||| || ||| || Sbjct 265698 TTTACCTGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTATCTTGAATCTT 265757 Query 101155 TTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTTGCCCGT 101214 ||| |||| | | || || | || ||| | || ||||| || || || Sbjct 265758 AGCTTTGACATTTTCAATAGTATCAGAAGATTCAACTTCTAAAGTGATAGTCTTTCCAGT 265817 Query 101215 CAATGTTTTAATAAAAATTTGCATTATTACAATATATTT-TTTACTTTGTATATA-TATG 101272 || ||||||| ||||||||||||| | || ||||| ||| | || | || ||| Sbjct 265818 TAAAGTTTTAACAAAAATTTGCATTTT----ATTTATTTATTTTCAATGATTTTACTATA 265873 Query 101273 TAATGACT-TTAATTAA 101288 ||||| | |||||||| Sbjct 265874 AAATGAATATTAATTAA 265890 Score = 95.1 bits (104), Expect = 1e-14 Identities = 139/197 (71%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 101042 GTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCCAATTGTTTGCCC 101101 || ||||||||||||||||| ||||| | | ||| |||||| |||||||| || Sbjct 265417 GTGGATTCTTTTTGAATATTATAATCAGAAAGAGTACGACCATCTTCTAATTGTTTACCT 265476 Query 101102 GCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTC 101161 ||| | ||||| | |||||||||| || | |||||||| || |||||| ||| Sbjct 265477 GCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTATCTTGAATTTTAGCTTTG 265536 Query 101162 ACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTTGCCCGTCAATGTT 101221 |||| | | || || | |||| ||| | || || ||||| || ||||| || Sbjct 265537 ACATTTTCAATGGTATCAGAGGACTCAACTTCTAAAGTGATGGTTTTACCAGTCAAAGTC 265596 Query 101222 TTAATAAAAATTTGCAT 101238 || | |||||||||||| Sbjct 265597 TTGACAAAAATTTGCAT 265613 Score = 91.5 bits (100), Expect = 1e-13 Identities = 139/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 101041 AGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCCAATTGTTTGCC 101100 ||| ||||||||||||||||| ||||| | | |||| | |||||| |||||||| || Sbjct 260922 AGTAGATTCTTTTTGAATATTATAATCTGAAAGAGTTCTACCATCTTCTAATTGTTTACC 260981 Query 101101 CGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTT 101160 ||| | ||||| | |||||| ||| || | |||||||| || ||| ||| ||| Sbjct 260982 TGCAAAAATAAGACGTTGTTGATCTGGAGGGATACCTTCTTTATCTTGAATCTTTGCTTT 261041 Query 101161 CACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTTGCCCGTCAATGT 101220 |||| | | || || | || ||| | || || || || || || || || Sbjct 261042 GACATTTTCAATGGTATCAGAAGATTCAACTTCTAAAGTGATTGTCTTTCCAGTTAAAGT 261101 Query 101221 TTTAATAAAAATTTGCAT 101238 ||||| |||||||||||| Sbjct 261102 TTTAACAAAAATTTGCAT 261119 Score = 87.8 bits (96), Expect = 1e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 101041 AGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCCAATTGTTTGCC 101100 ||| ||||||||||||||||| ||||| | | |||| | |||||| |||||||| || Sbjct 257284 AGTGGATTCTTTTTGAATATTATAATCTGAAAGAGTTCTTCCATCTTCTAATTGTTTTCC 257343 Query 101101 CGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTT 101160 ||| | ||||| | |||||||||| || | |||||||| || ||| ||| ||| Sbjct 257344 TGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCTTTATCTTGAATCTTTGCTTT 257403 Query 101161 CACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTTGCCCGTCAATGT 101220 |||| | | || || | | ||| | || ||||| || || || || || Sbjct 257404 GACATTTTCAATGGTATCAGAAAATTCAACTTCTAAAGTGATAGTCTTTCCAGTTAAAGT 257463 Query 101221 TTTAATAAAAATTTGCAT 101238 || | |||||||||||| Sbjct 257464 CTTGACAAAAATTTGCAT 257481 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 101026 TAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATC 101085 ||| || | ||| | ||| ||||||||||||||||| ||||| | | |||| | ||| Sbjct 260679 TAAAACTAAGTGAAGAGTAGATTCTTTTTGAATATTATAATCTGAAAGAGTTCTACCATC 260738 Query 101086 TTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTC 101145 ||| |||||||| || ||| | ||||| | |||||| ||| || | |||||||| || Sbjct 260739 TTCTAATTGTTTTCCTGCAAAAATAAGACGTTGTTGATCTGGTGGAATACCTTCTTTATC 260798 Query 101146 GGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGT 101205 ||| || || |||| | | || || | || ||| | |||||| || Sbjct 260799 TTGAATCTTGGCCTTGACATTTTCAATGGTATCAGAAGATTCAACTTCAAGGGTAATGGT 260858 Query 101206 TTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 || || || || || || | |||||||||||| Sbjct 260859 CTTTCCAGTTAAAGTCTTGACAAAAATTTGCAT 260891 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 101026 TAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATC 101085 ||| || | ||| | ||| ||||||||||||||||| ||||| | | |||| | ||| Sbjct 264489 TAAAACTAAGTGAAGAGTAGATTCTTTTTGAATATTATAATCTGAAAGAGTTCTACCATC 264548 Query 101086 TTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTC 101145 ||| |||||||| || ||| | ||||| | |||||| ||| || | |||||||| || Sbjct 264549 TTCTAATTGTTTTCCTGCAAAAATAAGACGTTGTTGATCTGGTGGGATACCTTCTTTATC 264608 Query 101146 GGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGT 101205 ||| || || |||| | | || || | || ||| | |||||| || Sbjct 264609 TTGAATCTTGGCCTTGACATTTTCAATGGTATCAGAAGATTCAACTTCAAGGGTAATGGT 264668 Query 101206 TTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 || || || || || || | |||||||||||| Sbjct 264669 CTTTCCAGTTAAAGTCTTGACAAAAATTTGCAT 264701 Score = 87.8 bits (96), Expect = 1e-12 Identities = 138/198 (70%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 101041 AGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCCAATTGTTTGCC 101100 ||| ||||||||||||||||||||||| | | |||| | |||||| |||||||| || Sbjct 264960 AGTGGATTCTTTTTGAATATTGTAATCAGAAAGAGTTCTTCCATCTTCTAATTGTTTTCC 265019 Query 101101 CGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTT 101160 ||| | ||||| | |||||| ||| || | |||||||| || ||| || || Sbjct 265020 TGCAAAAATAAGACGTTGTTGATCTGGTGGAATACCTTCTTTATCTTGAATCTTGGCCTT 265079 Query 101161 CACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTTGCCCGTCAATGT 101220 |||| | | || || | || ||| | |||||| || || || || || || Sbjct 265080 GACATTTTCAATGGTATCAGAAGATTCAACTTCAAGGGTAATGGTCTTTCCAGTTAAAGT 265139 Query 101221 TTTAATAAAAATTTGCAT 101238 || | |||||||||||| Sbjct 265140 CTTGACAAAAATTTGCAT 265157 Score = 86.0 bits (94), Expect = 5e-12 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 101041 AGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCCAATTGTTTGCC 101100 ||| ||||||||||||||||| ||||| | | |||| | |||||| |||||||| || Sbjct 257512 AGTGGATTCTTTTTGAATATTATAATCTGAAAGAGTTCTACCATCTTCTAATTGTTTTCC 257571 Query 101101 CGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTT 101160 ||| | ||||| | |||||| ||| || | |||||||| || |||||| ||| Sbjct 257572 TGCAAAAATAAGACGTTGTTGATCTGGTGGGATACCTTCTTTATCTTGAATTTTAGCTTT 257631 Query 101161 CACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTTGCCCGTCAATGT 101220 |||| | | || || | || ||| | || || || || || || || || Sbjct 257632 GACATTTTCAATGGTATCAGAAGATTCAACTTCTAAAGTGATGGTCTTACCAGTTAAAGT 257691 Query 101221 TTTAATAAAAATTTGCATTATTACAATATATTTTTTACT 101259 || | ||||||||||||| ||| | ||| | || |||| Sbjct 257692 CTTGACAAAAATTTGCATT-TTATATTAT-TATTATACT 257728 Score = 86.0 bits (94), Expect = 5e-12 Identities = 152/219 (69%), Gaps = 2/219 (1%) Strand=Plus/Plus Query 101041 AGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCCAATTGTTTGCC 101100 ||| ||||||||||||||||| ||||| | | |||| | |||||| |||||||| || Sbjct 261150 AGTAGATTCTTTTTGAATATTATAATCTGAAAGAGTTCTACCATCTTCTAATTGTTTTCC 261209 Query 101101 CGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTT 101160 ||| | ||||| | |||||| ||| || | |||||||| || |||||| ||| Sbjct 261210 TGCAAAAATAAGACGTTGTTGATCTGGTGGGATACCTTCTTTATCTTGAATTTTAGCTTT 261269 Query 101161 CACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTTGCCCGTCAATGT 101220 |||| | | || || | || ||| | || || || || || || || || Sbjct 261270 GACATTTTCAATAGTATCAGAAGATTCAACTTCTAAAGTGATGGTCTTACCAGTTAAAGT 261329 Query 101221 TTTAATAAAAATTTGCATTATTACAATATATTTTTTACT 101259 || | ||||||||||||| ||| | ||| | || |||| Sbjct 261330 CTTGACAAAAATTTGCATT-TTATATTAT-TATTATACT 261366 Score = 86.0 bits (94), Expect = 5e-12 Identities = 137/197 (70%), Gaps = 0/197 (0%) Strand=Plus/Plus Query 101042 GTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCCAATTGTTTGCCC 101101 || ||||||||||||||||| ||||| | | ||| |||||| |||||||| || Sbjct 265189 GTGGATTCTTTTTGAATATTATAATCAGAAAGAGTACGACCATCTTCTAATTGTTTACCT 265248 Query 101102 GCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTC 101161 ||| | ||||| | |||||| ||| || | |||||||| || |||||| ||| Sbjct 265249 GCAAAAATAAGACGTTGTTGATCTGGTGGAATACCTTCTTTATCTTGAATTTTAGCTTTG 265308 Query 101162 ACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTTGCCCGTCAATGTT 101221 |||| | || || || | || ||| | |||||| || || || || || || Sbjct 265309 ACATTTTCAACGGTATCAGAAGATTCAACTTCAAGGGTAATGGTCTTTCCAGTTAAAGTC 265368 Query 101222 TTAATAAAAATTTGCAT 101238 || | |||||||||||| Sbjct 265369 TTGACAAAAATTTGCAT 265385 Score = 84.2 bits (92), Expect = 2e-11 Identities = 157/231 (68%), Gaps = 0/231 (0%) Strand=Plus/Plus Query 101008 ATTGCCGCCTCGCAATCTTAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATC 101067 ||| || || || | | ||| || | || | ||| ||||||||||||||||| ||||| Sbjct 257023 ATTTCCTCCACGAAGACGTAATACTAAATGAAGAGTAGATTCTTTTTGAATATTATAATC 257082 Query 101068 GGCCATAGTTTTGGAATCTTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTAC 101127 | | |||| | |||||| |||||||| || ||| | ||||| | |||||||||| Sbjct 257083 TGAAAGAGTTCTTCCATCTTCTAATTGTTTTCCTGCAAAAATAAGACGTTGTTGGTCTGG 257142 Query 101128 GGGCACGCCTTCTTTGTCGGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGT 101187 || | |||||||| || ||| || ||| |||| | | || || | || Sbjct 257143 TGGGATACCTTCTTTATCCTGAATCTTAGCTTTGACATTTTCAATAGTATCAGAAGATTC 257202 Query 101188 TGTTTCGACGGTAATAGTTTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 ||| | || || || || || || || || || | |||||||||||| Sbjct 257203 AACTTCTAAAGTGATGGTCTTACCAGTTAAAGTCTTGACAAAAATTTGCAT 257253 Score = 82.4 bits (90), Expect = 6e-11 Identities = 137/198 (69%), Gaps = 0/198 (0%) Strand=Plus/Plus Query 101041 AGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCCAATTGTTTGCC 101100 ||| ||||||||||||||||| ||||| | | ||| |||||| |||||||| || Sbjct 264732 AGTGGATTCTTTTTGAATATTATAATCTGAAAGAGTACGACCATCTTCTAATTGTTTACC 264791 Query 101101 CGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCAATTTTTTGTTT 101160 ||| | ||||| | |||||| ||| || | |||||||| || |||||| ||| Sbjct 264792 TGCAAAAATAAGACGTTGTTGATCTGGTGGGATACCTTCTTTATCTTGAATTTTAGCTTT 264851 Query 101161 CACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTTGCCCGTCAATGT 101220 |||| | | || || | || ||| | |||||| || || || || || || Sbjct 264852 GACATTTTCAATGGTATCAGAAGATTCAACTTCAAGGGTAATGGTCTTTCCAGTTAAAGT 264911 Query 101221 TTTAATAAAAATTTGCAT 101238 || | |||||||||||| Sbjct 264912 CTTGACAAAAATTTGCAT 264929 >seq952 Length=293713 Score = 95.1 bits (104), Expect = 1e-14 Identities = 164/237 (69%), Gaps = 1/237 (0%) Strand=Plus/Minus Query 101036 TGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATCTTCCAATTGT 101095 || ||||| ||||| |||||||| |||||||||| | ||| |||||| ||||| Sbjct 167311 TGTAAAGTAGATTCCTTTTGAATGTTGTAATCGGAAAGAGTACGACCATCTTCTAATTGC 167252 Query 101096 TTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTCGGCAATTTTT 101155 || || || | ||||| | |||||||||| || | ||||| || || ||| || Sbjct 167251 TTACCGGCGAAGATAAGACGTTGTTGGTCTGGTGGGATACCTTCCTTATCTTGAATCTTA 167192 Query 101156 TGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGTTTTGCCCGTC 101215 ||| |||| | | || || | ||| || | ||||||||| || ||||| Sbjct 167191 GCTTTGACATTTTCAATAGTGTCGGAGGATTCGACCTCAAGGGTAATAGTCTTACCCGTA 167132 Query 101216 AATGTTTTAATAAAAATTTGCATTATTAC-AATATATTTTTTACTTTGTATATATAT 101271 | ||||| | |||||||||||| || | ||||||||||| || |||| |||| Sbjct 167131 AGGGTTTTGACAAAAATTTGCATCTCAACTACTATATTTTTTAAATTATATAAATAT 167075 >seq1454 Length=643854 Score = 91.5 bits (100), Expect = 1e-13 Identities = 176/259 (68%), Gaps = 8/259 (3%) Strand=Plus/Minus Query 101026 TAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATC 101085 ||| || | ||| | ||| ||||| ||||||||||||||||| | | ||| ||| Sbjct 197559 TAAAACTAAGTGAAGAGTGGATTCCTTTTGAATATTGTAATCAGAAAGAGTACGACCATC 197500 Query 101086 TTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTC 101145 ||| ||||| || || ||| | ||||| | |||||||||| || | ||||| || || Sbjct 197499 TTCTAATTGCTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTATC 197440 Query 101146 GGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGT 101205 |||||| || |||| | | || || | || ||| | ||| ||||| Sbjct 197439 TTGAATTTTAGCCTTAACATTTTCAATAGTATCAGATGATTCAACTTCTAAGGTGATAGT 197380 Query 101206 TTTGCCCGTCAATGTTTTAATAAAAATTTGCATTATTACAATATATTTTTT-------AC 101258 || || || || || |||| ||||||||||||| || ||||| || ||| | Sbjct 197379 CTTACCAGTTAAAGTCTTAACAAAAATTTGCATT-TTTTAATATTTTATTTAGAGGTAAA 197321 Query 101259 TTTGTATATATATGTAATG 101277 | | ||||||||| ||||| Sbjct 197320 TATATATATATATATAATG 197302 Score = 87.8 bits (96), Expect = 1e-12 Identities = 147/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Plus Query 101026 TAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATC 101085 ||| || | ||| | ||| ||||| ||||||||||||||||| | | ||| ||| Sbjct 190642 TAATACTAAGTGAAGAGTAGATTCCTTTTGAATATTGTAATCAGAAAGAGTACGACCATC 190701 Query 101086 TTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTC 101145 ||| ||||| || || ||| | ||||| | |||||| ||| || | ||||| || || Sbjct 190702 TTCTAATTGCTTACCTGCAAAAATAAGACGTTGTTGATCTGGTGGAATACCTTCCTTATC 190761 Query 101146 GGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGT 101205 |||||| || |||| | | || || | || ||| | ||||||||| Sbjct 190762 TTGAATTTTAGCCTTAACATTTTCAATAGTATCAGAAGATTCAACTTCAAGGGTAATAGT 190821 Query 101206 TTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 || || || || ||||||| |||||||||||| Sbjct 190822 CTTACCAGTTAAAGTTTTAACAAAAATTTGCAT 190854 >seq1232 Length=735369 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 101026 TAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATC 101085 ||| || | ||| | ||| ||||| ||||||||||||||||| | | |||| | ||| Sbjct 62818 TAAGACTAAGTGGAGAGTAGATTCCTTTTGAATATTGTAATCAGAAAGAGTTCTACCATC 62759 Query 101086 TTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTC 101145 ||| |||||||| || ||| | ||||| | |||||||||| || | ||||| || || Sbjct 62758 TTCTAATTGTTTACCAGCAAAGATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTATC 62699 Query 101146 GGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGT 101205 |||||| ||| |||| | | || || | || ||| | ||||| || Sbjct 62698 TTGAATTTTAGCTTTGACATTTTCAATAGTATCAGAAGATTCAACTTCAAGAGTAATGGT 62639 Query 101206 TTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 || || || ||||| |||| || |||||||| Sbjct 62638 CTTACCAGTTAATGTCTTAACGAAGATTTGCAT 62606 Score = 91.5 bits (100), Expect = 1e-13 Identities = 148/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 101026 TAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATC 101085 ||| || | ||| | ||| ||||| ||||||||||||||||| | | |||| | ||| Sbjct 63046 TAAGACTAAGTGGAGAGTAGATTCCTTTTGAATATTGTAATCAGAAAGAGTTCTACCATC 62987 Query 101086 TTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTC 101145 ||| |||||||| || ||| | ||||| | |||||||||| || | ||||| || || Sbjct 62986 TTCTAATTGTTTACCAGCAAAGATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTATC 62927 Query 101146 GGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGT 101205 |||||| ||| |||| | | || || | || ||| | ||||| || Sbjct 62926 TTGAATTTTAGCTTTGACATTTTCAATAGTATCAGAAGATTCAACTTCAAGAGTAATGGT 62867 Query 101206 TTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 ||| || || || || |||| || |||||||| Sbjct 62866 TTTACCAGTTAAAGTCTTAACGAAGATTTGCAT 62834 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 101026 TAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATC 101085 ||| || | ||| | ||| ||||| ||||||||||||||||| | | |||| | ||| Sbjct 62362 TAAGACTAAGTGGAGAGTAGATTCCTTTTGAATATTGTAATCAGAAAGAGTTCTACCATC 62303 Query 101086 TTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTC 101145 ||| ||||| || || ||| | ||||| | |||||||||| || | ||||| || || Sbjct 62302 TTCTAATTGCTTACCGGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTATC 62243 Query 101146 GGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGT 101205 |||||| ||| |||| | | || || | || ||| | ||||| || Sbjct 62242 TTGAATTTTAGCTTTGACATTTTCAATAGTATCAGAAGATTCAACTTCAAGAGTAATGGT 62183 Query 101206 TTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 || || || || || |||| || |||||||| Sbjct 62182 CTTACCAGTTAAAGTCTTAACGAAGATTTGCAT 62150 Score = 82.4 bits (90), Expect = 6e-11 Identities = 146/213 (69%), Gaps = 0/213 (0%) Strand=Plus/Minus Query 101026 TAACACCATGTGCAAAGTTGATTCTTTTTGAATATTGTAATCGGCCATAGTTTTGGAATC 101085 ||| || | ||| | ||| ||||| ||||||||||| ||||| | | |||| | ||| Sbjct 62590 TAAGACTAAGTGGAGAGTAGATTCCTTTTGAATATTATAATCAGAAAGAGTTCTACCATC 62531 Query 101086 TTCCAATTGTTTGCCCGCATATATAAGCCTTTGTTGGTCTACGGGCACGCCTTCTTTGTC 101145 ||| ||||| || || ||| | ||||| | |||||||||| || | ||||| || || Sbjct 62530 TTCTAATTGCTTACCAGCAAAAATAAGACGTTGTTGGTCTGGTGGAATACCTTCCTTATC 62471 Query 101146 GGCAATTTTTTGTTTCACATCGGCCACCGTCTCTGTGGACGTTGTTTCGACGGTAATAGT 101205 |||||| ||| |||| | | || || | || ||| | ||||| || Sbjct 62470 TTGAATTTTAGCTTTGACATTTTCAATAGTATCAGAAGATTCAACTTCAAGAGTAATGGT 62411 Query 101206 TTTGCCCGTCAATGTTTTAATAAAAATTTGCAT 101238 || || || ||||| |||| || |||||||| Sbjct 62410 CTTACCAGTTAATGTCTTAACGAAGATTTGCAT 62378 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 409651718204121