Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Neocallimastix_20californiae_20[genbank_20GCA_5F002104975.1_202017- 04-20] 1,819 sequences; 193,032,486 total letters Query= NC_033775.1 Length=376207 Score E Sequences producing significant alignments: (Bits) Value seq952 170 5e-37 seq1265 161 2e-34 seq585 143 6e-29 seq1246 132 1e-25 seq1454 125 2e-23 seq768 125 2e-23 seq502 122 2e-22 seq1259 113 1e-19 seq1043 107 5e-18 >seq952 Length=293713 Score = 170 bits (188), Expect = 5e-37 Identities = 186/245 (76%), Gaps = 9/245 (4%) Strand=Plus/Plus Query 177886 ATATTTTAAGAAATATATAAAGTAAGGTTAAAATGCTCCAAATTTTCGTGAAAACTCTCA 177945 ||| ||||| ||||||| ||| ||| | |||| ||||||| || ||||| || | Sbjct 167083 ATAATTTAAAAAATATA----GTA--GTTGAGATGC---AAATTTTTGTCAAAACCCTTA 167133 Query 177946 CAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAA 178005 | || || || || ||||| ||||| ||| ||| ||||| || || || |||||| | Sbjct 167134 CGGGTAAGACTATTACCCTTGAGGTCGAATCCTCCGACACTATTGAAAATGTCAAAGCTA 167193 Query 178006 AGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAAC 178065 ||||||| || || ||||| ||||| || ||||| ||||| |||||||||||||| || | Sbjct 167194 AGATTCAAGATAAGGAAGGTATCCCACCAGACCAACAACGTCTTATCTTCGCCGGTAAGC 167253 Query 178066 AGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATC 178125 | | |||||||| | |||||| ||||||| ||| | ||||| ||||| || | |||| Sbjct 167254 AATTAGAAGATGGTCGTACTCTTTCCGATTACAACATTCAAAAGGAATCTACTTTACATC 167313 Query 178126 TTGTT 178130 ||||| Sbjct 167314 TTGTT 167318 >seq1265 Length=1280584 Score = 161 bits (178), Expect = 2e-34 Identities = 161/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| || || ||| | || ||||| || ||||| | || || ||| || || Sbjct 257478 CAAATTTTTGTCAAGACTTTAACTGGAAAGACTATCACTTTAGAAGTTGAATTTTCTGAT 257419 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || |||||| ||||||||| || |||||||| || || || ||||| ||| Sbjct 257418 ACCATTGAAAATGTCAAAGCAAAGATTCAAGATAAAGAAGGTATTCCACCAGACCAACAA 257359 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||| || || |||||||| | ||||||||||| |||||| | |||||||| | Sbjct 257358 CGTCTTATTTTTGCAGGAAAACAATTAGAAGATGGAAGAACTCTTTCAGATTATAATATT 257299 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTT 178132 ||||||||||| || || ||| | ||||| Sbjct 257298 CAAAAAGAATCCACTCTTCATTTAGTTTT 257270 Score = 161 bits (178), Expect = 2e-34 Identities = 161/209 (77%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| || |||||| | || ||||| || ||||| | || || ||| || || Sbjct 261116 CAAATTTTTGTTAAAACTTTAACTGGAAAGACAATCACTTTAGAAGTTGAATCTTCTGAT 261057 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || |||||| ||||||||| || |||||||| |||||||| || || ||| Sbjct 261056 ACCATTGAAAATGTCAAAGCAAAGATTCAAGATAAAGAAGGTATCCCTCCAGATCAACAA 260997 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||| || || || ||||| | |||||||| || |||||| | |||||||| | Sbjct 260996 CGTCTTATTTTTGCAGGTAAACAATTAGAAGATGGTAGAACTCTTTCAGATTATAATATT 260937 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTT 178132 ||||||||||| || || ||| | ||||| Sbjct 260936 CAAAAAGAATCTACTCTTCATTTAGTTTT 260908 Score = 152 bits (168), Expect = 1e-31 Identities = 159/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| || || ||| | || || || || ||||| | || || ||| || || Sbjct 257250 CAAATTTTTGTCAAGACTTTAACTGGTAAGACCATCACTTTAGAAGTTGAATCTTCTGAT 257191 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || |||||| ||||||||||| |||||||| ||||| || ||||| ||| Sbjct 257190 ACTATTGAAAATGTCAAAGCTAAGATTCAGGATAAAGAAGGTATCCCACCAGACCAACAA 257131 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||| || || |||||||| | ||||||||||| |||||| | |||||||| | Sbjct 257130 CGTCTTATTTTTGCAGGAAAACAATTAGAAGATGGAAGAACTCTTTCAGATTATAATATT 257071 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTT 178132 ||||||||||| || || ||| | || || Sbjct 257070 CAAAAAGAATCTACTCTTCATTTAGTATT 257042 Score = 147 bits (162), Expect = 5e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| || || ||| | || ||||| || || ||||| || || ||| || || Sbjct 264698 CAAATTTTTGTCAAGACTTTAACTGGAAAGACCATTACCCTTGAAGTTGAATCTTCTGAT 264639 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || ||||| |||||||| || |||||||| ||||| || || || ||| Sbjct 264638 ACCATTGAAAATGTCAAGGCCAAGATTCAAGATAAAGAAGGTATCCCACCAGATCAACAA 264579 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||| || || |||||||| | |||||||| || |||||| | |||||||| | Sbjct 264578 CGTCTTATTTTTGCAGGAAAACAATTAGAAGATGGTAGAACTCTTTCAGATTATAATATT 264519 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTT 178132 ||||||||||| || || || | ||||| Sbjct 264518 CAAAAAGAATCTACTCTTCACTTAGTTTT 264490 Score = 147 bits (162), Expect = 5e-30 Identities = 158/209 (76%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| || || ||| | || ||||| || || ||||| || || ||| || || Sbjct 265154 CAAATTTTTGTCAAGACTTTAACTGGAAAGACCATTACCCTTGAAGTTGAATCTTCTGAT 265095 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || ||||| |||||||| || |||||||| || || || || || ||| Sbjct 265094 ACCATTGAAAATGTCAAGGCCAAGATTCAAGATAAAGAAGGTATTCCACCAGATCAACAA 265035 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||| || || |||||||| | ||||||||||| |||||| | ||||| || | Sbjct 265034 CGTCTTATTTTTGCAGGAAAACAATTAGAAGATGGAAGAACTCTTTCTGATTACAATATT 264975 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTT 178132 ||||||||||| || || ||| | ||||| Sbjct 264974 CAAAAAGAATCCACTCTTCATTTAGTTTT 264946 Score = 147 bits (162), Expect = 5e-30 Identities = 163/217 (75%), Gaps = 3/217 (1%) Strand=Plus/Minus Query 177914 TAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGA 177973 |||||||| ||||||| || |||||| | || ||||| || ||||| | || || || Sbjct 265845 TAAAATGC---AAATTTTTGTTAAAACTTTAACTGGAAAGACTATCACTTTAGAAGTTGA 265789 Query 177974 AAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCC 178033 | || || || || || || |||||| |||||||| || |||||||| || || || Sbjct 265788 ATCTTCTGATACTATTGAAAATGTCAAAGCTAAGATTCAAGATAAAGAAGGTATTCCACC 265729 Query 178034 GGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGA 178093 ||||| ||||| ||||| || || || ||||| | |||||||| || |||||| | || Sbjct 265728 AGACCAACAACGTCTTATTTTTGCAGGTAAACAATTAGAAGATGGTAGAACTCTTTCTGA 265669 Query 178094 TTATAACGTCCAAAAAGAATCAACACTGCATCTTGTT 178130 ||| || | ||||||||||| || || || |||||| Sbjct 265668 TTACAATATTCAAAAAGAATCTACTCTTCACCTTGTT 265632 Score = 145 bits (160), Expect = 2e-29 Identities = 164/219 (75%), Gaps = 3/219 (1%) Strand=Plus/Minus Query 177914 TAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGA 177973 |||||||| ||||||| || || ||| | || || || || ||||| | || || || Sbjct 257713 TAAAATGC---AAATTTTTGTCAAGACTTTAACTGGTAAGACCATCACTTTAGAAGTTGA 257657 Query 177974 AAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCC 178033 | || || ||||| || || |||||| || ||||| || |||||||| ||||| || Sbjct 257656 ATCTTCTGATACCATTGAAAATGTCAAAGCTAAAATTCAAGATAAAGAAGGTATCCCACC 257597 Query 178034 GGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGA 178093 || || ||||| ||||| || || |||||||| | |||||||| || |||||| | || Sbjct 257596 AGATCAACAACGTCTTATTTTTGCAGGAAAACAATTAGAAGATGGTAGAACTCTTTCAGA 257537 Query 178094 TTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTT 178132 |||||| | ||||||||||| || || ||| | ||||| Sbjct 257536 TTATAATATTCAAAAAGAATCCACTCTTCATTTAGTTTT 257498 Score = 143 bits (158), Expect = 6e-29 Identities = 158/209 (76%), Gaps = 1/209 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| || |||||| | || ||||| | ||||| | || || ||| || || Sbjct 260660 CAAATTTTTGTTAAAACTTTAACTGGAAAGTCAATCACTTTAGAAGTTGAATCTTCTGAT 260601 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || |||||| || ||||| || |||||||| |||||||| || || ||| Sbjct 260600 ACTATTGAAAATGTCAAAGCTAAAATTCAAGATAAAGAAGGTATCCCTCCAGATCAACAA 260541 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||| || || || ||||| | ||||||||||| |||||| | |||||||| || Sbjct 260540 CGTCTTATTTTTGCAGGTAAACAATTAGAAGATGGAAGAACTCTTTCAGATTATAATATC 260481 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTT 178132 | ||||||||| || || ||| | ||||| Sbjct 260480 C-AAAAGAATCTACTCTTCATTTAGTTTT 260453 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| || || ||| | || ||||| || || ||||| || || ||| || || Sbjct 260888 CAAATTTTTGTCAAGACTTTAACTGGAAAGACCATTACCCTTGAAGTTGAATCTTCTGAT 260829 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || ||||| |||||||| || |||||||| || || || || || ||| Sbjct 260828 ACCATTGAAAATGTCAAGGCCAAGATTCAAGATAAAGAAGGTATTCCACCAGATCAACAA 260769 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||| || || |||||||| | |||||||| || |||||| | |||||||| | Sbjct 260768 CGTCTTATTTTTGCAGGAAAACAATTAGAAGATGGTAGAACTCTTTCAGATTATAATATT 260709 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTT 178132 ||||||||||| || || || | ||||| Sbjct 260708 CAAAAAGAATCTACTCTTCACTTAGTTTT 260680 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| || || ||| | || ||||| || || ||||| || || ||| || || Sbjct 264926 CAAATTTTTGTCAAGACTTTAACTGGAAAGACCATTACCCTTGAAGTTGAATCTTCTGAT 264867 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || |||||| || ||||| || |||||||| ||||| || || || ||| Sbjct 264866 ACCATTGAAAATGTCAAAGCTAAAATTCAAGATAAAGAAGGTATCCCACCAGATCAACAA 264807 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||| || || || ||||| | |||||||| | |||||| | |||||||| | Sbjct 264806 CGTCTTATTTTTGCAGGTAAACAATTAGAAGATGGTCGTACTCTTTCAGATTATAATATT 264747 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTT 178132 ||||||||||| || || ||| | ||||| Sbjct 264746 CAAAAAGAATCCACTCTTCATTTAGTTTT 264718 Score = 143 bits (158), Expect = 6e-29 Identities = 157/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| || || ||| | || || ||||| ||||| | || || || ||| || Sbjct 265610 CAAATTTTTGTCAAGACTTTGACTGGTAAAACCATCACTTTAGAAGTTGAGTCCTCTGAT 265551 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || |||||| || ||||| || |||||||| || || || ||||| ||| Sbjct 265550 ACCATTGAAAATGTCAAAGCTAAAATTCAAGATAAAGAAGGTATTCCACCAGACCAACAA 265491 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||| || || || ||||| | |||||||| | |||||| | |||||||| | Sbjct 265490 CGTCTTATTTTTGCAGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTATAATATT 265431 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTT 178132 ||||||||||| ||||| ||| | ||||| Sbjct 265430 CAAAAAGAATCCACACTTCATTTAGTTTT 265402 Score = 141 bits (156), Expect = 2e-28 Identities = 163/219 (74%), Gaps = 3/219 (1%) Strand=Plus/Minus Query 177914 TAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGA 177973 |||||||| ||||||| || || ||| | || || || || ||||| | || || || Sbjct 261351 TAAAATGC---AAATTTTTGTCAAGACTTTAACTGGTAAGACCATCACTTTAGAAGTTGA 261295 Query 177974 AAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCC 178033 | || || || || || || |||||| || ||||| || |||||||| ||||| || Sbjct 261294 ATCTTCTGATACTATTGAAAATGTCAAAGCTAAAATTCAAGATAAAGAAGGTATCCCACC 261235 Query 178034 GGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGA 178093 || || ||||| ||||| || || |||||||| | |||||||| || |||||| | || Sbjct 261234 AGATCAACAACGTCTTATTTTTGCAGGAAAACAATTAGAAGATGGTAGAACTCTTTCAGA 261175 Query 178094 TTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTT 178132 |||||| | ||||||||||| || || ||| | ||||| Sbjct 261174 TTATAATATTCAAAAAGAATCTACTCTCCATTTAGTTTT 261136 Score = 138 bits (152), Expect = 3e-27 Identities = 156/209 (75%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 |||||||| || || ||| | || ||||| || || ||||| || || ||| || || Sbjct 265382 CAAATTTTTGTCAAGACTTTAACTGGAAAGACCATTACCCTTGAAGTTGAATCTTCTGAT 265323 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||| | || || |||||| || ||||| || |||||||| || || || || || ||| Sbjct 265322 ACCGTTGAAAATGTCAAAGCTAAAATTCAAGATAAAGAAGGTATTCCACCAGATCAACAA 265263 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||| || || || ||||| | |||||||| | |||||| | |||||||| | Sbjct 265262 CGTCTTATTTTTGCAGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTATAATATT 265203 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTT 178132 ||||||||||| ||||| ||| | ||||| Sbjct 265202 CAAAAAGAATCCACACTTCATTTAGTTTT 265174 >seq585 Length=8358 Score = 143 bits (158), Expect = 6e-29 Identities = 163/218 (75%), Gaps = 3/218 (1%) Strand=Plus/Plus Query 177915 AAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAA 177974 ||||||| |||| ||||| || ||| | || || ||||| || || || || || ||| Sbjct 3900 AAAATGC---AAATCTTCGTTAAGACTTTAACTGGTAAAACTATTACTCTTGAAGTTGAA 3956 Query 177975 AGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCG 178034 |||||| || || || || |||||| || || || || |||||||| || || || Sbjct 3957 TCCTCAGATACTATTGAAAATGTCAAAGCTAAAATCCAAGATAAAGAAGGTATTCCACCA 4016 Query 178035 GACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGAT 178094 ||||| ||||| ||||| || || || ||||| | ||||||||||| |||||| | ||| Sbjct 4017 GACCAACAACGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGAAGAACTCTTTCTGAT 4076 Query 178095 TATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTT 178132 ||||| | ||||||||||| || || || | ||||| Sbjct 4077 TATAATATTCAAAAAGAATCTACTCTTCACTTAGTTTT 4114 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || ||| | || || ||||| || || || || || ||| ||| || Sbjct 4362 CAAATCTTCGTTAAGACTTTAACTGGTAAAACTATTACTCTTGAAGTTGAATCCTCTGAT 4421 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || ||| || ||||| || |||||||| || || || ||||| ||| Sbjct 4422 ACTATTGAAAATGTTAAAGCTAAAATTCAAGATAAAGAAGGTATTCCACCAGACCAACAA 4481 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||| || || || ||||| | ||||||||||| |||||| | ||||| || | Sbjct 4482 CGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGAAGAACTCTTTCTGATTACAATATT 4541 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTT 178132 ||||||||||| || || || | ||||| Sbjct 4542 CAAAAAGAATCTACTCTTCACTTAGTTTT 4570 Score = 134 bits (148), Expect = 3e-26 Identities = 155/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| ||||| || ||| | || || ||||| || || || || || ||| ||| || Sbjct 4818 CAAATCTTCGTTAAGACTTTAACTGGTAAAACTATTACTCTTGAAGTTGAATCCTCTGAT 4877 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || ||| || ||||| || |||||||| || || || ||||| ||| Sbjct 4878 ACTATTGAAAATGTTAAAGCTAAAATTCAAGATAAAGAAGGTATTCCACCAGACCAACAA 4937 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||| || || || ||||| | ||||||||||| |||||| | ||||| || | Sbjct 4938 CGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGAAGAACTCTTTCTGATTACAATATT 4997 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTT 178132 ||||||||||| || || || | ||||| Sbjct 4998 CAAAAAGAATCTACTCTTCACTTAGTTTT 5026 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || |||||| | || || || || || || || || || ||| || ||| Sbjct 4134 CAAATCTTTGTTAAAACTTTAACTGGTAAGACCATTACTCTTGAAGTTGAATCTTCTGAC 4193 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || |||||| || || || || |||||||| || || || ||||| ||| Sbjct 4194 ACAATTGAAAATGTCAAAGCTAAAATCCAAGATAAAGAAGGTATTCCACCAGACCAACAA 4253 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||| || || || ||||| | ||||||||||| |||||| | ||||| || | Sbjct 4254 CGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGAAGAACTCTTTCTGATTACAATATT 4313 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTT 178132 ||||||||||| || || || | ||||| Sbjct 4314 CAAAAAGAATCCACTCTTCACTTAGTTTT 4342 Score = 129 bits (142), Expect = 1e-24 Identities = 154/209 (74%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || |||||| | || || || || || || || || || ||| ||| || Sbjct 4590 CAAATCTTTGTTAAAACTTTAACTGGTAAGACCATTACTCTTGAAGTTGAATCCTCTGAT 4649 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || ||| || ||||| || |||||||| || || || ||||| ||| Sbjct 4650 ACTATTGAAAATGTTAAAGCTAAAATTCAAGATAAAGAAGGTATTCCACCAGACCAACAA 4709 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||| || || || ||||| | ||||||||||| |||||| | ||||| || | Sbjct 4710 CGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGAAGAACTCTTTCTGATTACAATATT 4769 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTT 178132 ||||||||||| || || || | ||||| Sbjct 4770 CAAAAAGAATCTACTCTTCACTTAGTTTT 4798 Score = 127 bits (140), Expect = 5e-24 Identities = 148/200 (74%), Gaps = 0/200 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||| || || |||||| | || || || || || || || || || ||| ||| || Sbjct 5046 CAAATCTTTGTTAAAACTTTAACTGGTAAGACCATTACTCTTGAAGTTGAATCCTCTGAT 5105 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || ||| || ||||| || |||||||| || || || ||||| ||| Sbjct 5106 ACTATTGAAAATGTTAAAGCTAAAATTCAAGATAAAGAAGGTATTCCACCAGACCAACAA 5165 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||| || || || ||||| | ||||||||||| |||||| | ||||| || | Sbjct 5166 CGTCTTATTTTTGCTGGTAAACAATTAGAAGATGGAAGAACTCTTTCTGATTACAATATT 5225 Query 178104 CAAAAAGAATCAACACTGCA 178123 ||||||||||| || || || Sbjct 5226 CAAAAAGAATCCACTCTTCA 5245 >seq1246 Length=69101 Score = 132 bits (146), Expect = 1e-25 Identities = 151/203 (74%), Gaps = 0/203 (0%) Strand=Plus/Plus Query 177927 ATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACC 177986 ||||| || |||||| | ||||| || || || ||| | || || ||| || ||||| Sbjct 26071 ATTTTTGTTAAAACTTTAACAGGTAAGACCATTACCTTAGAAGTTGAATCTTCTGACACT 26130 Query 177987 ATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGA 178046 || || || ||||| |||||||| || || ||||| || || || || || ||||| Sbjct 26131 ATTGAAAATGTCAAGGCCAAGATTCAAGATAAGGAAGGTATTCCACCAGATCAACAACGT 26190 Query 178047 CTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAA 178106 | ||||| ||||| || || | |||||||| | |||||| | ||||| ||| | ||| Sbjct 26191 TTAATCTTTGCCGGTAAGCAATTAGAAGATGGTCGTACTCTTTCTGATTACAACATTCAA 26250 Query 178107 AAAGAATCAACACTGCATCTTGT 178129 |||||||| ||||| |||||||| Sbjct 26251 AAAGAATCTACACTTCATCTTGT 26273 >seq1454 Length=643854 Score = 125 bits (138), Expect = 2e-23 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || ||| | || || || || ||||| || || || ||| || || Sbjct 197578 CAAATTTTCGTAAAGACTTTAACTGGTAAGACTATCACTCTTGAAGTTGAATCTTCTGAT 197637 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || || |||||||| || || ||||| || || || ||||| ||| Sbjct 197638 ACCATTGAAAATGTTAAGGCTAAGATTCAAGATAAGGAAGGTATTCCACCAGACCAACAA 197697 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||| || || || || || | |||||||| | |||||| | ||||||||| | Sbjct 197698 CGTCTTATTTTTGCAGGTAAGCAATTAGAAGATGGTCGTACTCTTTCTGATTATAACATT 197757 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTT 178132 ||||| ||||| || || || | ||||| Sbjct 197758 CAAAAGGAATCCACTCTTCACTTAGTTTT 197786 Score = 111 bits (122), Expect = 4e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || || | || ||||| || || || | || || ||| || || Sbjct 204010 CAAATTTTCGTAAAGACATTAACTGGAAAGACTATTACTTTAGAAGTTGAATCTTCTGAT 204069 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || || |||||||| || || ||||| || || || ||||| ||| Sbjct 204070 ACCATTGAAAATGTTAAGGCTAAGATTCAAGATAAGGAAGGTATTCCACCAGACCAACAA 204129 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||| || || || || || | |||||||| | |||||| | |||||||| | Sbjct 204130 CGTCTTATTTTTGCAGGTAAGCAATTAGAAGATGGTCGTACTCTTTCTGATTATAATATT 204189 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTT 178132 ||||| ||||| || || || | ||||| Sbjct 204190 CAAAAGGAATCCACTCTTCACTTAGTTTT 204218 Score = 111 bits (122), Expect = 4e-19 Identities = 150/209 (72%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || ||| | || || || || ||||| || || || ||| || || Sbjct 204238 CAAATTTTCGTAAAGACTTTAACTGGTAAGACTATCACTCTTGAAGTTGAATCATCTGAT 204297 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 || || || || || || |||||||| || || ||||| || || || || || ||| Sbjct 204298 ACTATTGAAAATGTTAAGGCTAAGATTCAAGATAAGGAAGGTATTCCACCAGATCAACAA 204357 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||| || || || || || | |||||||| | |||||| | |||||||| | Sbjct 204358 CGTCTTATTTTTGCTGGTAAGCAATTAGAAGATGGTCGTACTCTTTCTGATTATAATATT 204417 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTT 178132 ||||| ||||| || || || | ||||| Sbjct 204418 CAAAAGGAATCCACTCTTCACTTAGTTTT 204446 Score = 104 bits (114), Expect = 6e-17 Identities = 163/233 (70%), Gaps = 3/233 (1%) Strand=Plus/Minus Query 177900 ATATAAAGTAAGGTTAAAATGCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATC 177959 ||||||| || |||||||| |||||||||| || || | || || || || || Sbjct 191328 ATATAAATAAAAACTAAAATGC---AAATTTTCGTAAAGACATTAACTGGTAAGACTATT 191272 Query 177960 ACCCTCGAGGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAA 178019 || | || || ||| || || || || || || || || |||||||| || || Sbjct 191271 ACTTTAGAAGTTGAATCTTCTGATACTATTGAAAATGTTAAGGCTAAGATTCAAGATAAG 191212 Query 178020 GAAGGAATCCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGA 178079 ||||| || || || || || ||||| ||||| || || || || || | |||||||| Sbjct 191211 GAAGGTATTCCACCAGATCAACAACGTCTTATTTTTGCAGGTAAGCAATTAGAAGATGGT 191152 Query 178080 AGGACTCTTGCCGATTATAACGTCCAAAAAGAATCAACACTGCATCTTGTTTT 178132 | |||||| | ||||| ||| | ||||| ||||| || || || | ||||| Sbjct 191151 CGTACTCTTTCTGATTACAACATTCAAAAGGAATCCACTCTTCACTTAGTTTT 191099 Score = 98.7 bits (108), Expect = 2e-15 Identities = 147/209 (70%), Gaps = 0/209 (0%) Strand=Plus/Plus Query 177924 CAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGAC 177983 ||||||||||| || || | || ||||| || || || | || || ||| || || Sbjct 204694 CAAATTTTCGTAAAGACATTAACTGGAAAGACTATTACTTTAGAAGTTGAATCATCTGAT 204753 Query 177984 ACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAA 178043 ||||| || || || || |||||||| || || ||||| || || || | || ||| Sbjct 204754 ACCATTGAAAATGTTAAGGCTAAGATTCAAGATAAGGAAGGTATTCCACCAGGTCAACAA 204813 Query 178044 CGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTC 178103 || ||||| || || || || || | |||||||| | |||||| | || || || | Sbjct 204814 CGTCTTATTTTTGCAGGTAAGCAATTAGAAGATGGTCGTACTCTTTCTGACTACAATATT 204873 Query 178104 CAAAAAGAATCAACACTGCATCTTGTTTT 178132 ||||| ||||| || || ||| | ||||| Sbjct 204874 CAAAAGGAATCTACTCTTCATTTAGTTTT 204902 >seq768 Length=375019 Score = 125 bits (138), Expect = 2e-23 Identities = 150/204 (74%), Gaps = 0/204 (0%) Strand=Plus/Minus Query 177927 ATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACC 177986 |||||||| ||||| | || || || || || ||| | || || ||| || ||||| Sbjct 192861 ATTTTCGTTAAAACATTAACTGGTAAGACCATTACCTTAGAAGTTGAATCTTCTGACACT 192802 Query 177987 ATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGA 178046 || || || ||||| |||||||| || || ||||| || || || || || ||||| Sbjct 192801 ATTGAAAATGTCAAGGCTAAGATTCAAGATAAGGAAGGTATTCCACCAGATCAACAACGT 192742 Query 178047 CTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAA 178106 | ||||| ||||| ||||| | |||||||| | |||||| | ||||| || | ||| Sbjct 192741 TTAATCTTTGCCGGTAAACAATTAGAAGATGGTCGTACTCTTTCTGATTACAATATTCAA 192682 Query 178107 AAAGAATCAACACTGCATCTTGTT 178130 |||||||| || || ||||||||| Sbjct 192681 AAAGAATCTACCCTTCATCTTGTT 192658 >seq502 Length=415512 Score = 122 bits (134), Expect = 2e-22 Identities = 148/201 (74%), Gaps = 2/201 (1%) Strand=Plus/Plus Query 177910 AGGTTAAAAT--GCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGA 177967 ||| |||||| | | ||||||||||| ||||| || || ||||| || || ||||| || Sbjct 365325 AGGATAAAATAAGATGCAAATTTTCGTCAAAACCCTTACTGGAAAGACTATAACCCTTGA 365384 Query 177968 GGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAAT 178027 ||| || || |||| || | || || || | |||||||| || || ||||| || Sbjct 365385 GGTTGAGTCTTCCGACAGTATTGTCAATGTTAAGAACAAGATTCAAGAAAAGGAAGGTAT 365444 Query 178028 CCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCT 178087 || || ||||| ||||| | || |||||||| ||||| | ||||||| || ||||| Sbjct 365445 TCCACCTGACCAACAACGTTTAATTTTCGCCGGTAAACAATTAGAAGATGACAGAACTCT 365504 Query 178088 TGCCGATTATAACGTCCAAAA 178108 | | ||||| ||| | ||||| Sbjct 365505 TTCTGATTACAACATTCAAAA 365525 >seq1259 Length=61445 Score = 113 bits (124), Expect = 1e-19 Identities = 146/201 (73%), Gaps = 2/201 (1%) Strand=Plus/Minus Query 177910 AGGTTAAAAT--GCTCCAAATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGA 177967 ||| |||||| | | ||||||||||| ||||| || || ||||| || || ||||| || Sbjct 17036 AGGATAAAATAAGATGCAAATTTTCGTTAAAACCCTTACTGGAAAGACTATAACCCTTGA 16977 Query 177968 GGTGGAAAGCTCAGACACCATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAAT 178027 ||| || || || | || | || || || | |||||||| || |||||||| || Sbjct 16976 GGTTGAGTCTTCCGATAGTATTGTCAATGTTAAGAACAAGATTCAAGAAAAAGAAGGTAT 16917 Query 178028 CCCTCCGGACCAGCAACGACTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCT 178087 || || || || ||||| | || ||||| || ||||| | ||||||| || ||||| Sbjct 16916 TCCACCAGATCAACAACGTTTAATTTTCGCTGGTAAACAATTAGAAGATGACAGAACTCT 16857 Query 178088 TGCCGATTATAACGTCCAAAA 178108 | | || || ||| ||||||| Sbjct 16856 TTCTGACTACAACATCCAAAA 16836 >seq1043 Length=1347342 Score = 107 bits (118), Expect = 5e-18 Identities = 133/182 (73%), Gaps = 0/182 (0%) Strand=Plus/Plus Query 177927 ATTTTCGTGAAAACTCTCACAGGAAAAACGATCACCCTCGAGGTGGAAAGCTCAGACACC 177986 ||||| || || || || |||||||| || || ||||| ||||| || || |||| Sbjct 570682 ATTTTTGTAAAGACCCTTACAGGAAAGACTATTACCCTTGAGGTCGAGTCTTCCGACAGT 570741 Query 177987 ATCGAGAACGTCAAACAAAAGATTCAGGACAAAGAAGGAATCCCTCCGGACCAGCAACGA 178046 || | || || || | |||||||| || || ||||| || || || || || ||||| Sbjct 570742 ATTGTTAATGTTAAGAATAAGATTCAAGAAAAGGAAGGTATTCCACCAGATCAACAACGT 570801 Query 178047 CTTATCTTCGCCGGAAAACAGCTCGAAGATGGAAGGACTCTTGCCGATTATAACGTCCAA 178106 |||||||||||||| || || | ||||||| | |||||| | || || ||| ||||| Sbjct 570802 CTTATCTTCGCCGGTAAGCAATTAGAAGATGACCGTACTCTTTCTGACTACAACATCCAA 570861 Query 178107 AA 178108 || Sbjct 570862 AA 570863 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1203703145915886