Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasitella_20parasitica_20[genbank_20GCA_5F000938895.1_202015-01- 16] 15,637 sequences; 44,910,645 total letters Query= NC_001348.1 Length=124884 Score E Sequences producing significant alignments: (Bits) Value seq13988 86.0 5e-12 >seq13988 Length=264055 Score = 86.0 bits (94), Expect = 5e-12 Identities = 114/156 (73%), Gaps = 2/156 (1%) Strand=Plus/Plus Query 19041 TACCAGAGATCGGGGGATATGGGCCTTGGGGTACCGTTCAACATTGCTGGATATGCACTT 19100 || |||||||| | ||||||||||| || || || ||||| ||||| | ||||| || Sbjct 239867 TATCAGAGATCTTGCGATATGGGCCTGGGCGTTCCATTCAATATTGCAAGTTATGCCCTA 239926 Query 19101 CTTACCTACATAGTAGCGCATGTTACAGGACTTAAAACC-GGAGATTTAATTCATACAAT 19159 | || || | || ||||| ||| ||||| | || ||||| || || ||||| || Sbjct 239927 TTGACTCGTATGATTGCTCATGTCACA-GACTTGGATCCTGGAGAGTTCATACATACCAT 239985 Query 19160 GGGGGATGCACATATTTACTTGAATCATATAGATGC 19195 ||| ||| | ||| | ||| | ||||||||||||| Sbjct 239986 GGGTGATACCCATGTGTACGTAGATCATATAGATGC 240021 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 399427864150665