Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasitella_20parasitica_20[genbank_20GCA_5F000938895.1_202015-01- 16] 15,637 sequences; 44,910,645 total letters Query= NC_001875.2 Length=131995 Score E Sequences producing significant alignments: (Bits) Value seq513 93.3 4e-14 >seq513 Length=239887 Score = 93.3 bits (102), Expect = 4e-14 Identities = 152/218 (70%), Gaps = 1/218 (0%) Strand=Plus/Minus Query 20964 AGCACCATATGCAAAGTGGACTCCTTTTGAATGTTATAGTCCGCCAGGGTTTGGGCGTCC 21023 || |||| || | ||| || |||||||||||||||||||| || || | | || Sbjct 208285 AGAACCAAGTGAAGAGTAGATTCCTTTTGAATGTTATAGTCTAAAAGAGTACGACCATCT 208226 Query 21024 TCCAGCTGTTTGCCCGCATAAATAAGTCTCTGCTGGTCCACGGGCACGCCTTCCTTGTCG 21083 || | || ||||| || ||||||| | || ||||| ||| | ||||||||||| Sbjct 208225 TCTAATTGCTTGCCGGCGAAAATAAGACGTTGTTGGTCTGGGGGAATACCTTCCTTGTCT 208166 Query 21084 GCGATCTTTTGTTTCACCTGGCCGACAGTATCACCGGGCTCCGTTTCCACGGTAATGGTC 21143 ||||||||| || || | | | |||||| || || ||| | ||||||||| Sbjct 208165 TGGATCTTTTGCTTGACATTATCAATCGTATCAGTGGATTCAACTTCTAATGTAATGGTC 208106 Query 21144 TTGCCGGTTAACGTTTTGACAAATATTTGCAT-TTTGA 21180 ||||| || | || || || || |||||||| ||||| Sbjct 208105 TTGCCAGTAAGAGTCTTAACGAAGATTTGCATATTTGA 208068 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 422178727557092