Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasitella_20parasitica_20[genbank_20GCA_5F000938895.1_202015-01- 16] 15,637 sequences; 44,910,645 total letters Query= NC_004062.1 Length=119217 Score E Sequences producing significant alignments: (Bits) Value seq15377 86.0 5e-12 >seq15377 Length=116332 Score = 86.0 bits (94), Expect = 5e-12 Identities = 147/211 (70%), Gaps = 2/211 (1%) Strand=Plus/Minus Query 42919 TCCTTTTGCACATTGTAATCGGACAATGTACGTTCGTCGTCCAATTGTTTGCCGGCAAAA 42978 ||||| || | ||||| || ||||| | || |||| || |||||||| |||||||| Sbjct 81260 TCCTTCTGAATGTTGTAGTCTGACAACGAGCGCCCGTCTTCTAATTGTTTACCGGCAAAG 81201 Query 42979 ATCAATCGCTGTTGATCGGCCGGCACACCTTCTTTTTCGCTGATCAACTCTTTGACTCTG 43038 ||||| || || || || | || | ||||||||| || |||| | ||||| | Sbjct 81200 ATCAAACGTTGCTGGTCTGGAGGAATACCTTCTTTGTCTTGGATCTTTTGCTTGACATTA 81141 Query 43039 CCAACTGTGTCGCCAGCCTCGACGTCTACCGTTATAGTTTTTCCGGTTAGAGTTTTCACA 43098 ||| | ||||| | || || || | || || ||||| || || || || || || Sbjct 81140 TCAATTCTGTCGGATGATTCTACCTCCAAAGTGATGGTTTTGCCAGTAAGTGTCTTGACG 81081 Query 43099 AAAATTTGCAT-TTTCTTAATTTTATTTGTA 43128 ||||||||||| ||| || | || |||||| Sbjct 81080 AAAATTTGCATATTTGTTTA-CTTGTTTGTA 81051 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 381296920130946