Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasitella_20parasitica_20[genbank_20GCA_5F000938895.1_202015-01- 16] 15,637 sequences; 44,910,645 total letters Query= NC_005038.1 Length=99657 Score E Sequences producing significant alignments: (Bits) Value seq15377 98.7 6e-16 seq513 89.7 3e-13 >seq15377 Length=116332 Score = 98.7 bits (108), Expect = 6e-16 Identities = 161/232 (69%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 33142 ACCGCCTCTTAACCGCAACACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGA 33201 ||| ||||||| || | ||| | ||| | || || || || || || ||||| || || Sbjct 81297 ACCACCTCTTAGACGAAGCACTAGATGAAGCGTTGATTCCTTCTGAATGTTGTAGTCTGA 81238 Query 33202 CAAATTGAGTTGGTCATCCAATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGG 33261 ||| | | ||| || ||||| || || ||| || |||||||||||||| | || Sbjct 81237 CAACGAGCGCCCGTCTTCTAATTGTTTACCGGCAAAGATCAAACGTTGCTGGTCTGGAGG 81178 Query 33262 TATGCCTTCTTTTTCGCTAATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAAC 33321 || |||||||| || ||| || || || | | ||| ||||| | || || Sbjct 81177 AATACCTTCTTTGTCTTGGATCTTTTGCTTGACATTATCAATTCTGTCGGATGATTCTAC 81118 Query 33322 GTCCAGAGTTATCGTTTTTCCCGTAAGAGTTTTTACGAAAATTTGCATGTTT 33373 |||| ||| || ||||| || ||||| || || |||||||||||||| ||| Sbjct 81117 CTCCAAAGTGATGGTTTTGCCAGTAAGTGTCTTGACGAAAATTTGCATATTT 81066 >seq513 Length=239887 Score = 89.7 bits (98), Expect = 3e-13 Identities = 145/209 (69%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 33161 ACCAAATGCAATGTCGACTCTTTTTGTATATTGTAATCAGACAAATTGAGTTGGTCATCC 33220 |||||||| | || || || || || |||||||| || || | | | | || || Sbjct 208510 ACCAAATGAAGAGTAGATTCCTTCTGGATATTGTAGTCTGAAAGAGTACGACCATCTTCT 208451 Query 33221 AATTGCTTTCCACTAAATATTAAACGTTGCTGGTCCGTGGGTATGCCTTCTTTTTCGCTA 33280 |||||||| || || || | |||||| ||||| | ||| |||||||| || || Sbjct 208450 AATTGCTTGCCGGCGAAAATAAGACGTTGTTGGTCTGGGGGAATGCCTTCCTTGTCTTGG 208391 Query 33281 ATCGCCTGTTTTACTGTTTGAATCGTGTCGTTGGGTTGAACGTCCAGAGTTATCGTTTTT 33340 ||| || || || | | |||| | ||| | | || ||| || | || || ||||| Sbjct 208390 ATCTTTTGCTTGACATTATCAATCATATCGGTAGATTCAACTTCTAACGTAATAGTTTTG 208331 Query 33341 CCCGTAAGAGTTTTTACGAAAATTTGCAT 33369 || ||||||||||| |||||||| ||||| Sbjct 208330 CCAGTAAGAGTTTTGACGAAAATCTGCAT 208302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 318716848660026