Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasitella_20parasitica_20[genbank_20GCA_5F000938895.1_202015-01- 16] 15,637 sequences; 44,910,645 total letters Query= NC_005902.1 Length=186250 Score E Sequences producing significant alignments: (Bits) Value seq13988 87.8 2e-12 >seq13988 Length=264055 Score = 87.8 bits (96), Expect = 2e-12 Identities = 166/239 (69%), Gaps = 8/239 (3%) Strand=Plus/Minus Query 7007 CATAAAATTGACACAATACATGACATGGAGGTAAAAC-AGCCTGATCTATATCAGATGGA 7065 ||||||||||||| || ||||||| || |||||| | | ||| || || | ||| Sbjct 239816 CATAAAATTGACAGAAAGCATGACAAGGCGGTAAAGCCATGCTGGGG-ATGTCTGCAGGA 239758 Query 7066 TTCCAAGCAGTCATTAAAATACGTCTATCATTTGGATTTGTTTTTAATTTTGTTATAATT 7125 |||||||| ||| | ||||| | ||| | ||||| || || || || | | ||| Sbjct 239757 TTCCAAGCGCTCAAAATGATACGGCGATCGGTGGGATTA-TTCTTGATCTTTTCA--ATT 239701 Query 7126 AT---TTGTAATTGATCTATACCCTGACCTTCATAATTAGTATGACAATTTATATAATTA 7182 || ||| | |||||| | || || ||| ||| | || | |||| | ||| || Sbjct 239700 ATCTCTTGCAGTTGATCAACGCCTTGCCCTGTATAGTCTGTGTCGCAATCAACATATTTG 239641 Query 7183 GCTCCAAAATGTCTCCATTGAAACCCATAAATAGGACCTAAATCACCTTCTTCACGATG 7241 || || || || | ||||||||| ||||| | || || ||||||||||||| ||||| Sbjct 239640 GCACCGAAGTGGCGCCATTGAAAACCATACACTGGCCCCAAATCACCTTCTTTGCGATG 239582 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 595755529369200