Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasitella_20parasitica_20[genbank_20GCA_5F000938895.1_202015-01- 16] 15,637 sequences; 44,910,645 total letters Query= NC_006883.2 Length=252401 Score E Sequences producing significant alignments: (Bits) Value seq2806 163 5e-35 >seq2806 Length=81310 Score = 163 bits (180), Expect = 5e-35 Identities = 361/536 (67%), Gaps = 4/536 (1%) Strand=Plus/Plus Query 193635 GTTGAACCTGCTGAGATCTATAATCTTGG-TGCTCAAAGTCATGTTAAAGTTTCCTTTGA 193693 ||| ||||| | || | || || ||||| ||||||| |||||| || || || ||||| Sbjct 10357 GTTCAACCTACCGAAGTTTACAA-CTTGGCTGCTCAATCTCATGTCAAGGTCTCATTTGA 10415 Query 193694 GATGCCAGAGTATACTTCTAATGTTGATGCTTTAGGAACTCTTAGAATACTTGAAGCAGT 193753 ||| | || || ||| | |||| |||||| | || ||||| | | | || || | Sbjct 10416 TATGTCTGAATACACTGGTGATGTCGATGCTCTCGGTACTCTCCGTCTTTTAGATGCTAT 10475 Query 193754 TCGTATGTTGGGAATG-GAGAAAGATGTTCGCATCTATCAGGCATCTACCAGCGAACTGT 193812 |||| | || || | || | || ||| |||||||||| |||||| ||||| | Sbjct 10476 CCGTACTTGCGGTTTGAGTGATCG-TGCTCGTTTCTATCAGGCTTCTACCTCTGAACTTT 10534 Query 193813 ATGGTGGTGTTCTAGGCACTCCACTATCAGAAACCACACCATTTCATCCACGCTCTCCTT 193872 |||| || | | || || | | |||||| || || ||| |||| || ||||| | Sbjct 10535 ATGGCAAAGTCGTTGAGACCCCTCAAAAAGAAACTACGCCTTTTTATCCTCGTTCTCCCT 10594 Query 193873 ATGGTGTAGCAAAGTTGTATGGTTATTGGATCATCAAGAATTATCGTGAGTCATATGGAT 193932 | ||||| || || | || ||||| ||||| | |||||||| || |||||| Sbjct 10595 ACGGTGTGGCTAAACTTTACGGTTACTGGATTACTGTCAATTATCGCGAATCATATAACA 10654 Query 193933 TCCACGCTAGTTCTGGTATTCTCTTCAATCACGAATCTCCAAGAAGAGGTGAGACATTTG 193992 | | || || ||||||||| ||||| |||||| ||| | | || || |||| Sbjct 10655 TGTATGCCTGTAATGGTATTCTGTTCAACCACGAAAGTCCTCGTCGTGGCCGCACTTTTG 10714 Query 193993 TAACTCGTAAGATTACACAAGGTTTATCTAAGATCTCTGTTGGATTACAGAAGATTCTTT 194052 | |||||||| || || | | | | || | ||| | | || || | ||||| Sbjct 10715 TCACTCGTAAAATCACTCGTGCTGTTGCTGATATCCATTTAGGTCGTCAAGAATGTCTTT 10774 Query 194053 ATCTTGGTAATCTTAATGCTAAGAGGGATTGGGGACACGCAAAGGATTATGTTGAAGCGA 194112 |||||||||| || |||||||| | |||||||||||||| |||||| |||| | | Sbjct 10775 ATCTTGGTAACATTGATGCTAAGCGTGATTGGGGACACGCTCGTGATTATATTGAGGGTA 10834 Query 194113 TGTGGTTAATGTTGCAACAGGATGAACCCGATGATTATGTGATTGCTACAGGTGAA 194168 ||||| | ||| | ||||| ||| || | |||| || | || || |||||| Sbjct 10835 TGTGGCTCATGCTTCAACAAGATACTCCTCAAGATTTCGTCTTGGCCACTGGTGAA 10890 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 807397353241720