Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasitella_20parasitica_20[genbank_20GCA_5F000938895.1_202015-01- 16] 15,637 sequences; 44,910,645 total letters Query= NC_007383.1 Length=134394 Score E Sequences producing significant alignments: (Bits) Value seq513 104 2e-17 >seq513 Length=239887 Score = 104 bits (114), Expect = 2e-17 Identities = 160/226 (71%), Gaps = 3/226 (1%) Strand=Plus/Plus Query 23975 TTTTTAGCCAAACAAA-ATGCAAGTGTTTGTAAAAACATTAACTGGAAAATCGATTACCA 24033 |||||| ||| |||| |||||| | || || || || | ||||| || | ||||| Sbjct 208059 TTTTTA--CAATCAAATATGCAAATCTTCGTTAAGACTCTTACTGGCAAGACCATTACAT 208116 Query 24034 TCGAAGTCGAGGCCAACGACACCATCGAGCAAGTCAAACAAAAGATTACCGACAAAGAAG 24093 | ||||| || ||| || || || || | ||||| |||||||| ||||| |||| Sbjct 208117 TAGAAGTTGAATCCACTGATACGATTGATAATGTCAAGCAAAAGATCCAAGACAAGGAAG 208176 Query 24094 GCATACCTCCCGATCAACAGAGACTGATTTACGGCGGCAAGCAACTCGAAGATGACAGAA 24153 | || || || || ||||| | || |||| || |||||||||| | ||||||| | | Sbjct 208177 GTATTCCCCCAGACCAACAACGTCTTATTTTCGCCGGCAAGCAATTAGAAGATGGTCGTA 208236 Query 24154 ACGTCAGCGATTATAACATTCAAAAAGAATCTACAATTCATTTAGT 24199 | || |||||||||||||| |||||||| |||| || || Sbjct 208237 CTCTTTTAGACTATAACATTCAAAAGGAATCTACTCTTCACTTGGT 208282 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 429854064543735