Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasitella_20parasitica_20[genbank_20GCA_5F000938895.1_202015-01- 16] 15,637 sequences; 44,910,645 total letters Query= NC_007767.1 Length=132959 Score E Sequences producing significant alignments: (Bits) Value seq513 84.2 2e-11 >seq513 Length=239887 Score = 84.2 bits (92), Expect = 2e-11 Identities = 148/216 (69%), Gaps = 0/216 (0%) Strand=Plus/Plus Query 115279 ATTAAAAATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGA 115338 || ||| |||||||| || || || || || || || || |||||||| | ||| || Sbjct 208067 ATCAAATATGCAAATCTTCGTTAAGACTCTTACTGGCAAGACCATTACATTAGAAGTTGA 208126 Query 115339 GTCCAGCGACACTGTTGGACAAGTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGT 115398 |||| || || ||| | || || ||||| || || || ||||| | ||| Sbjct 208127 ATCCACTGATACGATTGATAATGTCAAGCAAAAGATCCAAGACAAGGAAGGTATTCCCCC 208186 Query 115399 TGATCAGCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGA 115458 || || ||| | ||||||| || ||||| ||||||||||||| || | || Sbjct 208187 AGACCAACAACGTCTTATTTTCGCCGGCAAGCAATTAGAAGATGGTCGTACTCTTTTAGA 208246 Query 115459 TTATAACATTCAAAAAGAGTCTACTATACATATGGT 115494 |||||||||||||| || |||||| | || |||| Sbjct 208247 CTATAACATTCAAAAGGAATCTACTCTTCACTTGGT 208282 Score = 84.2 bits (92), Expect = 2e-11 Identities = 146/210 (70%), Gaps = 2/210 (1%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| ||||| |||||||| || || || ||||| ||||| | ||| || || | | Sbjct 208302 ATGCAGATTTTCGTCAAAACTCTTACTGGCAAAACTATTACGTTAGAAGTTGAATCTACC 208361 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || | || | || || || || ||||| || || || |||||| | ||| || || Sbjct 208362 GATA-TGATTGATAATGTCAAGCAAAAGATCCAAGACAAGGAAGGCATTCCCCCAGACCA 208420 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGATGACAAAACCATGGCCGATTATAA 115464 ||| | ||||||| || ||||| ||||||||||||| || | | || || || Sbjct 208421 ACAACGTCTTATTTTCGCCGGCAAGCAATTAGAAGATGGTCGTACTCTTTCAGACTACAA 208480 Query 115465 CATTCAAAAAGAGTCTACTATACATATGGT 115494 || || || || |||||| | ||| |||| Sbjct 208481 TATCCAGAAGGAATCTACTCTTCATTTGGT 208510 Score = 82.4 bits (90), Expect = 6e-11 Identities = 114/157 (73%), Gaps = 2/157 (1%) Strand=Plus/Plus Query 115286 ATGCAAATTTTTGTCAAAACGCTCACGGGAAAAACCATTACCGTCGAAACGGAGTCCAGC 115345 ||||| ||||| ||||| || || || || ||||| ||||| | ||| || || | | Sbjct 203108 ATGCAGATTTTCGTCAAGACTCTTACTGGTAAAACTATTACATTAGAAGTTGAATCTACC 203167 Query 115346 GACACTGTTGGACAA-GTAAAACAAAAAATTGCCGATAAAGAAGGCGTCCCCGTTGATCA 115404 || | || | || || || || ||||||||| ||||| ||||| | ||| || || Sbjct 203168 GATA-TGATTGATAATGTCAAGCAAAAAATTCAAGATAAGGAAGGTATTCCCCCAGACCA 203226 Query 115405 GCAAAGACTTATTTATGCGGGCAAACAATTAGAAGAT 115441 ||| | ||||||| || ||||| |||||||||||| Sbjct 203227 ACAACGTCTTATTTTCGCCGGCAAGCAATTAGAAGAT 203263 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 425262939668440