Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasitella_20parasitica_20[genbank_20GCA_5F000938895.1_202015-01- 16] 15,637 sequences; 44,910,645 total letters Query= NC_009503.1 Length=124121 Score E Sequences producing significant alignments: (Bits) Value seq15377 104 2e-17 >seq15377 Length=116332 Score = 104 bits (114), Expect = 2e-17 Identities = 162/232 (70%), Gaps = 0/232 (0%) Strand=Plus/Minus Query 33900 ACCTCCTCTCAGCCGCAGCACCAGATGAAGCGTGCTCTCCTTCTGAATGTTGTAATCTGC 33959 ||| ||||| || || ||||| ||||||||||| ||||||||||||||||| |||| Sbjct 81297 ACCACCTCTTAGACGAAGCACTAGATGAAGCGTTGATTCCTTCTGAATGTTGTAGTCTGA 81238 Query 33960 CAATTGTCGCTCGTCGTCCAATTGCTTGCCGGCAAATATCAGGCGCTGCTGATCCACCGG 34019 ||| ||| |||| || ||||| || |||||||| |||| || ||||| || || Sbjct 81237 CAACGAGCGCCCGTCTTCTAATTGTTTACCGGCAAAGATCAAACGTTGCTGGTCTGGAGG 81178 Query 34020 CACGCTCTCTTTGTCCATAATTTTTTGCTTAATGGAACTCACACTATCAGTAGATTCGCA 34079 | | |||||||| || |||||||| | | | || || | ||||| Sbjct 81177 AATACCTTCTTTGTCTTGGATCTTTTGCTTGACATTATCAATTCTGTCGGATGATTCTAC 81118 Query 34080 TTCGACCGTTATTGTTTTTCCGGTTAGTGTTTTCACAAAGATTTGCATTTTT 34131 || | || || ||||| || || ||||| || || || |||||||| ||| Sbjct 81117 CTCCAAAGTGATGGTTTTGCCAGTAAGTGTCTTGACGAAAATTTGCATATTT 81066 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396986729460874