Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasitella_20parasitica_20[genbank_20GCA_5F000938895.1_202015-01- 16] 15,637 sequences; 44,910,645 total letters Query= NC_010191.2 Length=186713 Score E Sequences producing significant alignments: (Bits) Value seq7507 154 2e-32 seq11881 111 2e-19 seq802 96.9 4e-15 >seq7507 Length=243275 Score = 154 bits (170), Expect = 2e-32 Identities = 1037/1651 (63%), Gaps = 58/1651 (4%) Strand=Plus/Plus Query 113681 ATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCACGATCCGCCGCCATATCA 113740 || |||| ||||| |||||| |||||||| || |||||||| || ||||||||| Sbjct 202937 ATAAAGATGTTCAGACTTTGACTCTGATCGATAAAAGCACCACGATCAGCAGCCATATCA 202996 Query 113741 ATCAC---ATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCT 113797 | || | || || | ||||| |||||| | || | || ||| | | | Sbjct 202997 ACCAAGGTACGCTGGCTC---AGCTCCCAGACAGTTTTATACATGTCCTTCAACTTTTGA 203053 Query 113798 GGGATATCCACGATATTTTGGATGGAGCCACCCGC---CTTGACCATGAGATCCTTCATA 113854 ||||| | ||| |||||||| |||||||| | | ||| |||| | ||| || Sbjct 203054 GGGATGCCAGGGATGTTTTGGATAGAGCCACCATCAGACATGATCATG---TTCTTGATG 203110 Query 113855 TCCTTTGACCAGAGACCAATCTTTTTGAGATCCTCCACGAGATGCTTATTGACAACAACA 113914 |||| ||| ||||| || | | ||||| || | || |||| Sbjct 203111 TCCTCGTTCCAAAGACCCATTTCGACCAAATCCTTCAGCAACCAAGGGTTTACAATTTGG 203170 Query 113915 AACTCACCCGCGAGGGTGCGTCTCAGATAGATATTGGTCGTGTATGGCTCAAAGCACTCA 113974 || ||||| || || |||| ||| | || | ||||| ||||||||||| || Sbjct 203171 AATTCACCAGCAAGAACACGTCGGGTATACAAGTTTGATGTGTAGGGCTCAAAGCATTCG 203230 Query 113975 TTGTTACCCAAGATTTGGGCGGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCTGTTA 114034 ||| |||| |||||| | ||| ||||| || ||||| || || | | ||| |||| Sbjct 203231 TTGAAGCCCATGATTTGAGAGGTTGAGGCAGTAGGCATAGGAGCAAGCAAGAGGGAGTTA 203290 Query 114035 CGGAGACCCT--TTTCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTT-GAGCTTT 114091 |||| || | ||| | ||| ||| || | || |||| || | || | Sbjct 203291 CGGACGCCGTGATTTGC--AATCTTTTCTTTCAAGGATGCCCAATCCCAAAGAGAAGTAG 203348 Query 114092 GTCTCCCCCTGCCACATATCAAACTGGAGGATACCTTGGGAGGCTGGCGATCCCTCAAAT 114151 || | | | |||||| || | || || || |||||||| | || || ||| || Sbjct 203349 GTGTGACATT-CCACATGTCGTATTGCAGAATGCCTTGGGAAACAGGACTACCTTCATAT 203407 Query 114152 GTCTCGTATGGGCCCTCAACCTCCGCCAATTC----GGAGCTCGCCTCGAGGGCTGCGTG 114207 ||||| || ||||| || || | ||| | |||| || ||||| || || Sbjct 203408 GTCTCATACGGGCCAAATTGCTGAGCGAGTTCATTAGAAGCT----TCCAGGGCAGCATG 203463 Query 114208 ATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCGAG 114267 || ||||| || ||||| || ||||| ||||||||| || || || || | Sbjct 203464 GTAGATTGTTTCGAAAATCTGAATATTCAGCTGCTTGGCCTCAGGCGAGTCGAAAGCAAA 203523 Query 114268 TCGGCA-CAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATGTC 114326 | || || ||||| |||| || | ||||| ||||| | ||||| || ||||||| Sbjct 203524 -CTTCATCAGCATAAAAGCATCAGCCAAGCCTTGAACACCCAAACCAATAGGACGATGTC 203582 Query 114327 TCATATTAGA-CTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTATTT 114385 || | || || | || || |||| |||||| | || |||||||| | | || Sbjct 203583 TCTTGTTGGAGCGCTCT-GCTTCAACCACAGGATAATAGTTGACATCGATAATCTTGTTC 203641 Query 114386 AGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAGTC 114445 | ||| ||||||| ||||| |||| ||||||||||||| | |||| | | || Sbjct 203642 AAATTCTTGGTGATGACCTTAGTGACATCATGAAGCTTTTGGAAATCGTATC------TC 203695 Query 114446 TCTTCATTGACATACTTA----GGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTC 114501 ||| || |||| || | || | ||| || || ||||||||||| || || | Sbjct 203696 TCTCTATCGACA-ACAAAAGAGGGTAAGGCAATGGAGGCCAGATTACAGAC---GGCTAC 203751 Query 114502 ATCCTTATCAGTG---TACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCC 114558 || | | || || || | ||||| ||||| | || || ||| || || || Sbjct 203752 TTCGTCAGGGCTGGAATATTCAACGATTTCAGTACAAAGGTTACTACACTTGATAGTACC 203811 Query 114559 CAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAAAGCATGTATGGCGTCCC 114618 || |||| ||| || |||| | || || |||||||| || |||||| | || | || Sbjct 203812 CAGATTCTGTTGGTTGCTCTTTCTATTGCAAGCATCCTTATAGAGCATGAAAGGATTACC 203871 Query 114619 CGTCTCCGTTTGGGACTTGAGAATAGCCTTCCAGA-CATCGGCGGCTGGCACAGTGGCGT 114677 || || ||||| | || | || || | ||| | | | | | || | | || | Sbjct 203872 GGTTTCAGTTTGAGCCTCCAAGATGGCATACCAAAGCTTTTGTGCCTTG-ATGGTTTCTC 203930 Query 114678 TGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCTTCAAACTCTTCACCCACGGCCT 114737 | |||| || || ||| |||| | | | || | || || || ||| | | Sbjct 203931 TAGCTCTGCCTTCACGCTCATACTGTTCAAACAAGGTCTTGAATTCATCGCCCCACACTT 203990 Query 114738 CTGAGAGCCCTGGTGCCTTATCTGGGCAGAAGAGAGACCATTGACCACCCTCCTCAACAC 114797 | | || || || |||| | || |||||||||||||| | ||| || || | Sbjct 203991 CACATAGGCCAGGAGCCTCGTTGGGACAGAAGAGAGACCACTCACCGTTATCTCTGACTC 204050 Query 114798 GCTTCATGAAGAGGTCTGGGATCCAGAGAGCTGAGAAGAGATCCCGACAGCGAGCTTCTT 114857 ||| ||| ||||| || || | ||| ||||| | || | ||| || | | ||| | Sbjct 204051 GCTCCATAAAGAGATCAGGCACCCAAAGAGCATAAAACAAATCGCGGGCTCTAATTTCGT 204110 Query 114858 CATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATG---ATATCCGCGTGCCACGGTT 114914 | | || || || | |||| || |||| ||||| || ||||| |||| Sbjct 204111 CCTTACCAAAGTTTTTGCGGAGATCCAGGAA---CATGAATATATCAGCATGCCAGGGTT 204167 Query 114915 CCAGGTACACCGCGATTGACCCCTTACG---ACGACCAGCCTGGTTTACATACCTCGCTG 114971 |||| |||| |||| | || ||| | |||| | || | ||||| | || | Sbjct 204168 CCAGATACATGGCGAAAGCGCCAGGACGCTTATTACCACCTTGATCGACATAGCGGGCCG 204227 Query 114972 TGGCATTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCCGAA 115031 || ||||| || || ||||| || | || |||| ||| | ||| || || || || Sbjct 204228 TGTTGTTAAACACACGCAGCATGGGCAAGAGGCCATTAGAGTAGCCGTTGGTACCAGCAA 204287 Query 115032 TACGAGACTTATTGGCTCTGACATCATGGATGTGCATACCAATACCCCCTGCCCACTTTG 115091 | ||| | | || | ||||| || || | || || || || || ||| ||||| Sbjct 204288 TGTAAGAACCAGTAGCACGGACATTGTGAATATTCAAGCCGATGCCACCAGCCGTCTTTG 204347 Query 115092 AGATTTGCGCGCACTCCGTGAGACTGCCGTAGATCCCGTCGATCGAGTCACCCTTATTTG 115151 | ||||| || || | |||| | ||||||| || ||||||||||| | || | | Sbjct 204348 AAATTTGAGCACAGATCTTGAGGGTTTCGTAGATACCTTCGATCGAGTCCTCTTTCATGG 204407 Query 115152 CGATAAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTGGTG 115211 | | ||| || |||| |||||| | || || ||||| ||||| | ||| || Sbjct 204408 TCAACAAGAAACAAGAGGACAGTTGTGGGCGAGGAGTGCCAGCATTGAACAAGGTGGGAC 204467 Query 115212 TCGCGTGGATGAACATACCTTGGGACATCTTATCGTAGGTCTCCAAGACGGCGGGAATGT 115271 | || || |||| || | ||||| | ||| || || | | | ||| || | Sbjct 204468 TGGCATGTGTGAAATAACGCTCTGACATTAGGTTGTACGTTTCTATGGCAGCGTCGATAT 204527 Query 115272 CTTCCCCGTGAATACCGATCGAGACCCGCAT 115302 ||| || || ||||| | | ||| ||||| Sbjct 204528 CTTGGCCATGGATACCAACAGCGACACGCAT 204558 >seq11881 Length=132943 Score = 111 bits (122), Expect = 2e-19 Identities = 190/274 (69%), Gaps = 5/274 (2%) Strand=Plus/Plus Query 126046 GGCAAACTCTTGGTGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGTCC 126105 |||||| || || || ||||||||||| ||||| | |||||| || ||| || || Sbjct 44836 GGCAAAGTCGGTATGAAGGCCCTCGTCACGAGAGATCAATTCATTAGAAAAGGTCAACCC 44895 Query 126106 TGGCATGAGACCCCGCTTCTTCAACCAGAAAATCGCACAAAATGAACCCGAGAAGAAGAT 126165 |||||||| || |||||||| | ||||||||| | |||||| || ||||||||||| Sbjct 44896 AGGCATGAGGCCGCGCTTCTTGAGCCAGAAAATGGAGGCAAATGAGCCTGAGAAGAAGAT 44955 Query 126166 TCCCTCCACACACGCGAACGCAAAGAGACGCTCAGCAAAGGAGCGCGACTTTGTGTCA-A 126224 || || || || || |||| | | |||||||| || | ||| | | Sbjct 44956 ACCTTCGACGGCAGCAAAAGCAACTAATCTTTCAGCAAAAGA----ATCATTGCCAGAGA 45011 Query 126225 ACCACTTCATCGCCCACTGCGCCTTTTTCTCGATACACGGGACGGTCTGGATCGCTTCAA 126284 ||| || | ||||| | |||||| ||| |||||| |||| ||| | || || |||| Sbjct 45012 TCCATTTGAAGGCCCAGTCAGCCTTTCTCTTGATACAGGGGATGGTTTCAATGGCGTCAA 45071 Query 126285 AGAGTTCCTTCTTTTCTGATGGATCTTTGATGTA 126318 |||| || |||||| | ||| ||||| || Sbjct 45072 AGAGCATCTCCTTTTCAGCGCTATCCTTGATATA 45105 >seq802 Length=2293163 Score = 96.9 bits (106), Expect = 4e-15 Identities = 185/273 (68%), Gaps = 0/273 (0%) Strand=Plus/Plus Query 114322 ATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCT 114381 ||||||||||||| | || || ||| || || || |||| ||| || || | Sbjct 2025844 ATGTCTCATATTACTTGTGCGTGCTTCCTCTACAGGGTAGTAATTGACATCAATGACTTT 2025903 Query 114382 ATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCG 114441 || | ||||| ||||||||||| | | ||||||||| || || | ||||| | Sbjct 2025904 GTTCAAGTTTTTCGTGACAACCTTGGCAACTTCATGAAGTTTCTCAAAGTCAAACGTCTT 2025963 Query 114442 AGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTC 114501 || ||| ||| ||| |||| || || || | || ||||||||||| |||| ||| Sbjct 2025964 GGTTTCTGCATCAACAAACTTGGGCAGAGCAAGCGAAGCCAGATTACAAACAGCCACCTC 2026023 Query 114502 ATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAA 114561 || | || || || || || || ||||||| || || |||||||||| Sbjct 2026024 GTCAGGAGATGTATATTCAATGATCTCTGTACACAGGTTGGATGAGGAGATGGTGCCCAG 2026083 Query 114562 GTTCTTTTGATTTGACTTTGTGTTACACGCATC 114594 |||||||||||||||||| || || ||||| Sbjct 2026084 ATTCTTTTGATTTGACTTTTCATTGCAGGCATC 2026116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 597236839771960