Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasitella_20parasitica_20[genbank_20GCA_5F000938895.1_202015-01- 16] 15,637 sequences; 44,910,645 total letters Query= NC_013288.1 Length=191761 Score E Sequences producing significant alignments: (Bits) Value seq7507 156 5e-33 seq8767 149 8e-31 seq11881 114 2e-20 seq802 96.9 4e-15 >seq7507 Length=243275 Score = 156 bits (172), Expect = 5e-33 Identities = 1040/1654 (63%), Gaps = 64/1654 (4%) Strand=Plus/Plus Query 115642 ATGAAGAGGTTCATACTTTGGGATTGATCGATGAAGCGTCCCCGATCCGCCGCCATATCA 115701 || |||| ||||| |||||| |||||||| || || ||||| || ||||||||| Sbjct 202937 ATAAAGATGTTCAGACTTTGACTCTGATCGATAAAAGCACCACGATCAGCAGCCATATCA 202996 Query 115702 ATCAC---ATCCTTCATCTTGATTTCCCACACAGTTCTGTAGAGGTTCTTAATATCATCT 115758 | || | || || | ||||| |||||| | || | || ||| | | | Sbjct 202997 ACCAAGGTACGCTGGCTC---AGCTCCCAGACAGTTTTATACATGTCCTTCAACTTTTGA 203053 Query 115759 GGGATATCCACGATATTTTGGATAGAGCCACCTGC---CTTGACCATGAGATCCTTCATA 115815 ||||| | ||| ||||||||||||||||| | | ||| |||| | ||| || Sbjct 203054 GGGATGCCAGGGATGTTTTGGATAGAGCCACCATCAGACATGATCATG---TTCTTGATG 203110 Query 115816 TCCTTTGACCAGAGACCAATCTTCTTGAGATCCTCCA----CGAGGTGCTTATTGACAAC 115871 |||| ||| ||||| || | | ||||| || | | | | ||| ||| Sbjct 203111 TCCTCGTTCCAAAGACCCATTTCGACCAAATCCTTCAGCAACCAAGGGTTTA----CAAT 203166 Query 115872 AACAAACTCACCCGCGAGGGTGCGTCTCAGATAGATGTTGGTCGTGTATGGCTCAAAGCA 115931 || ||||| || || |||| ||| | ||| | ||||| ||||||||||| Sbjct 203167 TTGGAATTCACCAGCAAGAACACGTCGGGTATACAAGTTTGATGTGTAGGGCTCAAAGCA 203226 Query 115932 CTCATTGTTACCCAAGATTTGGGCTGTGGAGGCTGTGGGCATGGGTGCCATGAGAAGGCT 115991 || ||| |||| |||||| | || ||||| || ||||| || || | | ||| Sbjct 203227 TTCGTTGAAGCCCATGATTTGAGAGGTTGAGGCAGTAGGCATAGGAGCAAGCAAGAGGGA 203286 Query 115992 GTTGCGGAGACCCACCCCCCTAATGCGTTCCTTGAGGGCGTCCCAGTCGTAGTT-GAGCT 116050 ||| |||| || ||| ||| || | || |||| || | || | Sbjct 203287 GTTACGGACGCCGTGATTTGCAATCTTTTCTTTCAAGGATGCCCAATCCCAAAGAGAAGT 203346 Query 116051 TTGTCTCCCCCTCCCACATATCAAACTGGAGGATACCTTGGGACGCTGGCGATCCCTCAA 116110 || | | ||| |||| || | || || || |||||||| | || || ||| Sbjct 203347 AGGTGTGACATTCC-ACATGTCGTATTGCAGAATGCCTTGGGAAACAGGACTACCTTCAT 203405 Query 116111 ATGTCTCATATGGGCCCTCAACCTCCGCCAATTC----GGAGCTCGCCTCGAGGGCTGCG 116166 |||||||||| ||||| || || | ||| | |||| || ||||| || Sbjct 203406 ATGTCTCATACGGGCCAAATTGCTGAGCGAGTTCATTAGAAGCT----TCCAGGGCAGCA 203461 Query 116167 TGATACATTGTCTCAAAAATGCGAGCATTCATTGCCTTGGCCTCGTCGGAATCAAACGCG 116226 || || ||||| || ||||| || ||||| ||||||||| || || || || Sbjct 203462 TGGTAGATTGTTTCGAAAATCTGAATATTCAGCTGCTTGGCCTCAGGCGAGTCGAAAGCA 203521 Query 116227 AGACGGCA-CAAAATAAATACATCCGCGAGACCTTGGACACCGAGGCCAATTGGGCGATG 116285 | || || || ||||| |||| || | ||||| ||||| | ||||| || ||||| Sbjct 203522 A-ACTTCATCAGCATAAAAGCATCAGCCAAGCCTTGAACACCCAAACCAATAGGACGATG 203580 Query 116286 TCTCATATTAGA-CTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCTAT 116344 |||| | || || | || || |||| |||||| | || |||||||| | | | Sbjct 203581 TCTCTTGTTGGAGCGCTCT-GCTTCAACCACAGGATAATAGTTGACATCGATAATCTTGT 203639 Query 116345 TTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCGAG 116404 | | ||| ||||||| ||||| |||| ||||||||||||| | |||| | | Sbjct 203640 TCAAATTCTTGGTGATGACCTTAGTGACATCATGAAGCTTTTGGAAATCGTATC------ 203693 Query 116405 TCTCTTCATTGACATACTTA----GGAAGGGCGATTGACGCCAGATTACACACAGAGGTC 116460 ||||| || |||| || | || | ||| || || ||||||||||| || || Sbjct 203694 TCTCTCTATCGACA-ACAAAAGAGGGTAAGGCAATGGAGGCCAGATTACAGAC---GGCT 203749 Query 116461 TCATCCTTATCAGTG---TACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTG 116517 | || | | || || || | ||||| ||||| | || || ||| || || Sbjct 203750 ACTTCGTCAGGGCTGGAATATTCAACGATTTCAGTACAAAGGTTACTACACTTGATAGTA 203809 Query 116518 CCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCATCCTTGTAGAGCATATATGGCGTC 116577 |||| |||| ||| || |||| | || || |||||||| |||||||| | || | Sbjct 203810 CCCAGATTCTGTTGGTTGCTCTTTCTATTGCAAGCATCCTTATAGAGCATGAAAGGATTA 203869 Query 116578 CCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA-CATCGGCGGCTGGCACAGTGGC 116636 || || || ||||| | || | || || | ||| | | | | | || | | || | Sbjct 203870 CCGGTTTCAGTTTGAGCCTCCAAGATGGCATACCAAAGCTTTTGTGCCTTG-ATGGTTTC 203928 Query 116637 GTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGGCCTCAAACTCTTC-ACCCACAG 116695 | |||| || || ||| |||| | | | || || || || || |||||| Sbjct 203929 TCTAGCTCTGCCTTCACGCTCATACTGTTCAAACAAGGTCTTGAATTCATCGCCCCACA- 203987 Query 116696 CCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAGACCATTGACCACCCTCCTCAA 116755 | || | || || || |||| | ||||||||||||||||| | ||| || | Sbjct 203988 CTTCACATAGGCCAGGAGCCTCGTTGGGACAGAAGAGAGACCACTCACCGTTATCTCTGA 204047 Query 116756 CCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGAAGAGATCCCGACAGCGAGCTT 116815 | |||| ||| ||||| || || | ||| || || | || | ||| || | | || Sbjct 204048 CTCGCTCCATAAAGAGATCAGGCACCCAAAGAGCATAAAACAAATCGCGGGCTCTAATTT 204107 Query 116816 CTTCATCCCCCTGATTGAGACGCAACTCCAAAAAGTCCATG---ATATCCGCGTGCCACG 116872 | || | || || || | |||| || |||| ||||| || ||||| | Sbjct 204108 CGTCCTTACCAAAGTTTTTGCGGAGATCCAGGAA---CATGAATATATCAGCATGCCAGG 204164 Query 116873 GTTCCAGGTACACCGCGATTGACCCCTTGCG---ACGACCAGCCTGGTTTACATACCTCG 116929 ||||||| |||| |||| | || || | |||| | || | ||||| | | Sbjct 204165 GTTCCAGATACATGGCGAAAGCGCCAGGACGCTTATTACCACCTTGATCGACATAGCGGG 204224 Query 116930 CCGTTGCGTTAAATACGCGAAGCATTGGAATGATACCATCAGATTGGCCATTTGTCCCCC 116989 |||| |||||| || || ||||| || | || |||| ||| | ||| || || || Sbjct 204225 CCGTGTTGTTAAACACACGCAGCATGGGCAAGAGGCCATTAGAGTAGCCGTTGGTACCAG 204284 Query 116990 GAATACGAGACTTGTTGGCTCTGACATCGTGGATGTGCATACCAATACCCCCTGCCCACT 117049 ||| ||| | || | ||||| ||| || | || || || || || ||| || Sbjct 204285 CAATGTAAGAACCAGTAGCACGGACATTGTGAATATTCAAGCCGATGCCACCAGCCGTCT 204344 Query 117050 TTGAGATTTGTGCGCACTCCGTGAGACTGCCGTAGATCCCATCGATCGAGTCACCCTTAT 117109 |||| ||||| || || | |||| | ||||||| || ||||||||||| | || Sbjct 204345 TTGAAATTTGAGCACAGATCTTGAGGGTTTCGTAGATACCTTCGATCGAGTCCTCTTTCA 204404 Query 117110 TTGCGATGAGGAAGCAGCTCGACATTTGTGGCCTTGGTGTACCAGCGTTGAAGAGGGTTG 117169 | | | | ||| || |||| |||||| | || || ||||| ||||| | ||| | Sbjct 204405 TGGTCAACAAGAAACAAGAGGACAGTTGTGGGCGAGGAGTGCCAGCATTGAACAAGGTGG 204464 Query 117170 GTGTCGCGTGGATGAACATACCTTGGGACATCTTATCGTAGGTCTCCAAGACAGAGGGAA 117229 | | || || |||| || | ||||| | ||| || || | | ||| | | Sbjct 204465 GACTGGCATGTGTGAAATAACGCTCTGACATTAGGTTGTACGTTTCTATGGCAGCGTCGA 204524 Query 117230 TGTCTTCCCCGTGAATACCGATTGAGACCCGCAT 117263 | |||| || || ||||| | | ||| ||||| Sbjct 204525 TATCTTGGCCATGGATACCAACAGCGACACGCAT 204558 >seq8767 Length=28599 Score = 149 bits (164), Expect = 8e-31 Identities = 583/909 (64%), Gaps = 22/909 (2%) Strand=Plus/Minus Query 115903 TAGATGTTGGTCGTGTATGGCTCAAAGCACTCATTGTTACCCAAGATTTGGGCTGTGGAG 115962 || ||||||| || || || ||||||||||||||| ||| | || || | || || Sbjct 17141 TAAATGTTGGAAGTATAGGGTTCAAAGCACTCATTGAAACCGAGAATCTGCGAGGTAGAT 17082 Query 115963 GCTGTGGGCATGGGTGCCATGAGAAGGCTGTTGCGGAGACCCACCCCCCTAATGCGTTCC 116022 || |||||||| ||||||| |||||| || || | || | |||| || Sbjct 17081 GCAGTGGGCATAGGTGCCAAGAGAAGAGAATTACGAACGCCATACTTGGCAATGTCAGCC 17022 Query 116023 TTGAGGGCGTCCCAGTCG--TAGTTGAGCTTTGTCTCCCCCTCCCACATATCAAACTGGA 116080 || |||| |||||||| || | || | | | | |||||| ||| |||| | Sbjct 17021 TTCAGGGTATCCCAGTCCCATAAATCAG--TAGGAGTGACATTCCACATGTCATACTGCA 16964 Query 116081 GGATACCTTGGGACGCTGGCGATCCCTCAAATGTCTCATATGGGCCCTCAACCTCCGCCA 116140 ||| | ||| | || || || ||| |||| ||| || || || | | || Sbjct 16963 ACTGACCCTTGGAGACAGGAGAGCCTTCATATGTAGAATAAGGTCCA-CACTTTGCAGCA 16905 Query 116141 A-TTCGGAGCTCGCCTCGAGGGCTGCGTGATACATTGTCTCAAAAATGCGAGCATTCATT 116199 | |||| | || || || || || ||||| || || ||||| || | ||| | | Sbjct 16904 AGTTCGCAAGAGGCTTCCAGAGCAGCATGATAGATAGTTTCAAAGATTTGCAAATTTAGT 16845 Query 116200 GCCTTGGCCTCGTCGGAATCAAACGCGAGACGGCA-CAAAATAAATACATCCGCGAGACC 116258 || ||||| |||||||| | || | || ||| ||||| | || || | || Sbjct 16844 TTTTTAGCCTCAGGAGAATCAAAAG-GATATCTCATCAAGATAAAAGCGTCAGCCAATCC 16786 Query 116259 TTGGACACCGAGGCCAATTGGGCGATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGG 116318 |||||| || | ||||| || ||||| | ||| ||||| || ||| | ||||| Sbjct 16785 TTGGACGCCCAAACCAATGGGTCGATGACGCATGTTAGAGTTGTAAGCTTCTTGAACGGG 16726 Query 116319 ATAAAAATTCCTATCGATAACCCTATTTAGATTTTTGGTGACAACCTTTGTGATTTCATG 116378 |||||||| ||| ||||| | || | || ||||| | ||||| | | | || Sbjct 16725 GTAAAAATTGAGATCAATAACTTTGTTCAAGTTCTTGGTCAAGACCTTGGCAACATGGTG 16666 Query 116379 AAGCTTTTCGTAATCAAAACTGCGAGTCTCTTCATTGACATACTTAGGAAGG----GCGA 116434 |||||| | | ||||| || | | || || || ||||| || || | Sbjct 16665 AAGCTTCTTGAAATCATAAACACCA-TCGCTA---------ACGTAGGAGGGCAAAGCAA 16616 Query 116435 TTGACGCCAGATTACACACAGAGGTCTCATCCTTATCAGTGTACTCTATAATTTCCGTAC 116494 || | ||||| || |||| | ||||| | || |||||| | ||| || |||| Sbjct 16615 GAGAACCAAGATTGCAAACAGCGACTTCATCGGGACTAGAGTACTCGACAATCTCAGTAC 16556 Query 116495 ACAAATTTGAACTCTTAATGGTGCCCAAGTTCTTTTGATTTGACTTTGTGTTACACGCAT 116554 |||| || || || ||||| |||||||||| || || ||| ||| || || | Sbjct 16555 ACAAGTTACTACATTTGATGGTACCCAAGTTCTGCTGGTTGCTCTTGCGGTTGCAAGCGT 16496 Query 116555 CCTTGTAGAGCATATATGGCGTCCCCGTCTCCGTTTGGGACTTGAGAATAGCCTTCCATA 116614 | |||||||| | | | || |||| || |||||||| | || | || || ||| | Sbjct 16495 CTTTGTAGAGTAAAAAAGGATTCCCAGTTTCCGTTTGAGCCTCCATGATGGCAAACCAAA 16436 Query 116615 CATCGGCGGCTGGCACAGTGGCGTTGGCTCGCCCCTCCTCCTCGTACTTTGTGTAGAGGG 116674 | || |||| || || || | || | || || |||||| | || | Sbjct 16435 GTTTTTGAGCAGGCATGGTTTCGCGAGCAAGACCTTGCTTTTCATACTTTTCAAAAAGAG 16376 Query 116675 CCTCAAACTCTTCACCCACAGCCTCTGAGAGCCCTGGTGCCTTATCTGGACAGAAGAGAG 116734 | ||||| || || ||| | | | | | || ||||| | || ||||||||||| | Sbjct 16375 CTTCAAATTCATCGCCCCAAACATTACATAAACCGGGTGCTTCATTAGGACAGAAGAGCG 16316 Query 116735 ACCATTGACCACCCTCCTCAACCCGCTTCATGAAGAGGTCTGGGATCCAGAGCGCCGAGA 116794 ||||||||||| || ||||||||||||||||| || || |||||||| || || ||| Sbjct 16315 ACCATTGACCATTTTCTTCAACCCGCTTCATGAAAAGATCAGGGATCCACAGAGCATAGA 16256 Query 116795 AGAGATCCC 116803 | | |||| Sbjct 16255 ACATGTCCC 16247 >seq11881 Length=132943 Score = 114 bits (126), Expect = 2e-20 Identities = 183/261 (70%), Gaps = 5/261 (2%) Strand=Plus/Plus Query 127532 TGGAGACCCTCGTCACGGGAGATGAGTTCATTCGAGAAGCACAGACCTGGCATGAGACCC 127591 || || ||||||||||| ||||| | |||||| || ||| || || |||||||| || Sbjct 44849 TGAAGGCCCTCGTCACGAGAGATCAATTCATTAGAAAAGGTCAACCCAGGCATGAGGCCG 44908 Query 127592 CGCTTCTTCAACCAGAAAATCGCACAAAATGAGCCAGAGAAGAAGATCCCCTCCACACAC 127651 |||||||| | ||||||||| | ||||||||| ||||||||||| || || || Sbjct 44909 CGCTTCTTGAGCCAGAAAATGGAGGCAAATGAGCCTGAGAAGAAGATACCTTCGACGGCA 44968 Query 127652 GCGAACGCAAATAGACGCTCGGCAAAGGAGCGGGACTTTG-TATCAAACCACTTCATCGC 127710 || || |||| || | || ||||| || | ||| | | ||| || | || Sbjct 44969 GCAAAAGCAACTAATCTTTCAGCAAAAGA----ATCATTGCCAGAGATCCATTTGAAGGC 45024 Query 127711 CCACTGTGCCTTTTTCTCGATACATGGGACGGTCTGGATCGCTTCAAAGAGTTCCTTCTT 127770 ||| | |||||| ||| |||||| |||| ||| | || || |||||||| || ||| Sbjct 45025 CCAGTCAGCCTTTCTCTTGATACAGGGGATGGTTTCAATGGCGTCAAAGAGCATCTCCTT 45084 Query 127771 TTCTGATGGATCTTTGATGTA 127791 ||| | ||| ||||| || Sbjct 45085 TTCAGCGCTATCCTTGATATA 45105 >seq802 Length=2293163 Score = 96.9 bits (106), Expect = 4e-15 Identities = 185/273 (68%), Gaps = 0/273 (0%) Strand=Plus/Plus Query 116283 ATGTCTCATATTAGACTTTCGAGCGGTCTCCACGGGATAAAAATTCCTATCGATAACCCT 116342 ||||||||||||| | || || ||| || || || |||| ||| || || | Sbjct 2025844 ATGTCTCATATTACTTGTGCGTGCTTCCTCTACAGGGTAGTAATTGACATCAATGACTTT 2025903 Query 116343 ATTTAGATTTTTGGTGACAACCTTTGTGATTTCATGAAGCTTTTCGTAATCAAAACTGCG 116402 || | ||||| ||||||||||| | | ||||||||| || || | ||||| | Sbjct 2025904 GTTCAAGTTTTTCGTGACAACCTTGGCAACTTCATGAAGTTTCTCAAAGTCAAACGTCTT 2025963 Query 116403 AGTCTCTTCATTGACATACTTAGGAAGGGCGATTGACGCCAGATTACACACAGAGGTCTC 116462 || ||| ||| ||| |||| || || || | || ||||||||||| |||| ||| Sbjct 2025964 GGTTTCTGCATCAACAAACTTGGGCAGAGCAAGCGAAGCCAGATTACAAACAGCCACCTC 2026023 Query 116463 ATCCTTATCAGTGTACTCTATAATTTCCGTACACAAATTTGAACTCTTAATGGTGCCCAA 116522 || | || || || || || || ||||||| || || |||||||||| Sbjct 2026024 GTCAGGAGATGTATATTCAATGATCTCTGTACACAGGTTGGATGAGGAGATGGTGCCCAG 2026083 Query 116523 GTTCTTTTGATTTGACTTTGTGTTACACGCATC 116555 |||||||||||||||||| || || ||||| Sbjct 2026084 ATTCTTTTGATTTGACTTTTCATTGCAGGCATC 2026116 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 613387282348920