Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasitella_20parasitica_20[genbank_20GCA_5F000938895.1_202015-01- 16] 15,637 sequences; 44,910,645 total letters Query= NC_013668.3 Length=248526 Score E Sequences producing significant alignments: (Bits) Value seq14752 104 4e-17 >seq14752 Length=160396 Score = 104 bits (114), Expect = 4e-17 Identities = 348/536 (65%), Gaps = 7/536 (1%) Strand=Plus/Minus Query 159913 AAACAGGAGGCACGCAAAGTC-GCAGTGCAGTCCCTCGTCCCGAGAGATGAACTCGTTGG 159971 ||||| |||||| |||| || ||| || || || || || |||| ||||| || || | Sbjct 137789 AAACAAGAGGCATCCAAAATCAGCA-TGTAGGCCTTCATCACGAGTAATGAATTCATTAG 137731 Query 159972 ACATGATGAGGCCCGGCATGATCCCACGCGGTTTGAGCCAAAAAATGGCCGCAAAAGCAC 160031 | | | | || ||||| | |||||| ||||||||||| || | ||||| | | Sbjct 137730 AAAGAGTCAAACCAGGCATTAAACCACGCTTCTTGAGCCAAAAGATAGAGGCAAACGATC 137671 Query 160032 CGCTAAAAAAGATCCCCTCCACGGCCGCAAACGCCACGAGCCTCTCACCAAAAGAGGCGT 160091 | ||| ||||| |||||||| || ||||| || || | | ||||||||| || Sbjct 137670 CAGAAAAGAAGATACCCTCCACAGCAGCAAAAGCAACAATACGGACACCAAAAGGTTGGT 137611 Query 160092 TGGTGTCATGGGTCCACCTTTTG---GCCCATTCAGCCTTCTTTGCGATGCACGGCATGC 160148 | | |||| | || |||| ||||| | |||||| | ||| || ||| Sbjct 137610 TTGATTCATTAGAGATCCATTTGAAAGCCCAGTTAGCCTTATCCTTAATGACAGGAATGG 137551 Query 160149 GCTCGACGGCGTTAAACAATCTGTCCTGCTCCTTCACATCCTTGATCAGAGTAGCAATCA 160208 |||| ||| ||||| || || | ||| | ||| || || |||| | |||| Sbjct 137550 TTTCGATGGCATTAAATAAGAATTCTTTCTCAATAGAATCTTTAATGTAAGTATCGATCA 137491 Query 160209 GCTTCGAGTACATTTCTGCGTGCACATTTTCGATGGCCATCTGAAAGTTGTAGAAATATG 160268 |||||||||||| | ||| | || || || |||||||| |||||| | Sbjct 137490 ATAGCGAGTACATTTCAGAGTGAATGTTCTCAATCATGATCTGAAAACCGTAGAAGCACT 137431 Query 160269 TCGCCTCCAGATA-CTGCACCTCCTGTGTGAACCTTTGACCCAGATTGGCATTAACCAAC 160327 | |||| | | || || || || | ||| ||| ||||||| |||| || | Sbjct 137430 TTGCCT-CGGCTACCTTGACTTCATCGCAGAAGTTTTTCACCAGATTCTCATTGACAATA 137372 Query 160328 CCGTCGGCGGCCGCAAAGAAAGCCAACACGTGAGAGATGAAATGTCTCTCGTCTTTGTTG 160387 || || | | |||||||| |||||||| |||| || || |||||| || | || Sbjct 137371 CCATCAGAAGTAGCAAAGAAGGCCAACACACGAGAAATAAAGAATCTCTCATCATCATTT 137312 Query 160388 AGTCTCTTTTCCCAGTGTGTCACGTCTTGGGCCAAATCAACCTCTTCCGCGCTCCA 160443 ||| | | ||||||| ||| ||| | | || |||||| || || || |||| Sbjct 137311 AGTTTTTCCTCCCAGTCAATCAAGTCCTTTGACAGATCAACTTCCTCGGCTGTCCA 137256 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 794999776976720