Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasitella_20parasitica_20[genbank_20GCA_5F000938895.1_202015-01- 16] 15,637 sequences; 44,910,645 total letters Query= NC_014637.1 Length=617453 Score E Sequences producing significant alignments: (Bits) Value seq10709 172 2e-37 seq802 172 2e-37 seq15113 158 5e-33 seq513 136 2e-26 seq6568 91.5 6e-13 >seq10709 Length=96185 Score = 172 bits (190), Expect = 2e-37 Identities = 256/362 (71%), Gaps = 6/362 (2%) Strand=Plus/Plus Query 451242 CTCCTGAAGAAATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATA 451301 |||||||||||||||| ||||||| | || || ||||||||||| || || ||| Sbjct 91513 CTCCTGAAGAAATTTCTGGTATGGTTTTGACCAAGATGAAAGAAACTGCTGAGGCCTATC 91572 Query 451302 TTGGTTCTCCAGTTACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAAC 451361 | || || || ||| |||| || ||||||| ||||| || ||||||||||| |||| Sbjct 91573 TCGGCAAGCCTGTCACTCATGCTGTTGTTACTGTCCCCGCCTACTTCAATGATGCCCAAC 91632 Query 451362 GGCAAGCAACTAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATG 451421 | ||||| || || ||||| || |||||||||| | || | |||| || | |||| Sbjct 91633 GTCAAGCTACCAAGGATGCCGGTACTATTGCTGGTCTTAACATCATTCGTATCCTCAATG 91692 Query 451422 AACCTACAGCAGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaa 451481 |||| || || |||||| | || || || ||| || ||| || | || || | Sbjct 91693 AACCCACTGCCGCTGCTATTGCTTACGGTTTAGACAA---AAATGA---TGGCGAGAAGA 91746 Query 451482 aTATTTTAGTATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAG 451541 || | | || | ||||| ||||| |||||| |||| ||| | || || ||||| | Sbjct 91747 ATGTACTCGTTTACGATTTGGGTGGTGGAACTTTTGATGTCTCTCTCCTGTCTATTGATG 91806 Query 451542 ATGGGGTATTTGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTG 451601 |||| | |||||||| ||| || |||||| ||||| | || ||||||||| | | Sbjct 91807 ATGGTATCTTTGAAGTTTTGGCTACTGCTGGTGACACTCACTTGGGTGGTGAAGATTTCG 91866 Query 451602 AT 451603 || Sbjct 91867 AT 91868 Score = 111 bits (122), Expect = 6e-19 Identities = 407/635 (64%), Gaps = 8/635 (1%) Strand=Plus/Plus Query 451842 TGAAACCTGTTGATCAAGTATTACATGATTCTAAAATTAGTAAAGATAAAATTGATGAAA 451901 |||| |||||||| ||||| | | ||| || || || ||||| | ||||| | Sbjct 92110 TGAAGCCTGTTGAACAAGTTCTCAAAGATGCTGGCATCTCCAAGGATAAGGTCGATGAGA 92169 Query 451902 TTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTGTCTTCTTATT 451961 |||| ||||| || ||||| || || || || || | ||| | | | ||| | Sbjct 92170 TTGTTCTTGTTGGTGGTTCCACTCGTATCCCCAAGGTCCAAAAGCTCCTCGAAGATTACT 92229 Query 451962 TTGGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATATGGTGCTG 452021 || || || | | | ||| | | ||||||||||| ||||| || | ||||||| Sbjct 92230 TTAACGGTAAGAAGCCCTCCAAGGGTATCAATCCTGATGAGGCTGTCGCTTTCGGTGCTG 92289 Query 452022 CAGTTCAAGCAGCTATTCTAACAGGTTCAGATGATGAAAAATTAGGAGATATTCTGTTAG 452081 | ||||||| | ||||| ||| | || ||| | | | || |||| Sbjct 92290 CTGTTCAAGGTGGCATTCT------TTCTGGCGAGGAATCCTCTGATAAGGTTTTGTTGT 92343 Query 452082 TAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATGACTAATTTAA 452141 | ||||| | ||| | | || || |||| || ||||||| | ||||| || | | Sbjct 92344 TGGATGTCAATCCTTTGACACTCGGTATTGAGACCACTGGTGGCGTAATGACCAAGCTCA 92403 Query 452142 TTAAACGAGGAACTTCTATTCCTTGTAAAAAGAGTCAAACATTTAGTACAGCAAGTGATA 452201 || || ||| ||||||| || ||| ||||| || ||| || |||| Sbjct 92404 TTCCTCGTAACACTGTTATTCCTACCAAGAAGTCTCAAATCTTCTCTACTGCTGCAGATA 92463 Query 452202 ACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATGACACGAGATAATA 452261 ||||||| || || ||||| |||||||| |||||||| |||| ||||| | Sbjct 92464 ACCAACCTACCGTTTTGATCCAAGTCTTTGAAGGTGAACGTGCCTTGACCAAGGATAACA 92523 Query 452262 ATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCAAGGGGAACTCCTCAAA 452321 | | | || | || | | ||| ||||| || | || ||||||| Sbjct 92524 ACATTTTGGGTAAGTTCGAGTTGACTGGTATTGCTCCTGCTCCCCGTGGTGTTCCTCAAG 92583 Query 452322 TTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGTGCAGTTGAAAAAT 452381 | ||| |||||| ||| | ||||| |||||||| | || || || || | ||| || Sbjct 92584 TCGAAGTTACCTTTGAAATCGATGCCAATGGTATCTTGAAGGTTAGCGCTGCTGATAAGG 92643 Query 452382 CATCTGGAAAATCAGAAAAAATTACAATTACTAATGATAAAAACCGTTTATCTAAAGAAG 452441 ||||||| || || ||| || || ||||| || || ||| ||| | ||| |||||| Sbjct 92644 CATCTGGCAAGTCTGAATCTATCACTATTACCAACGACAAAGGTCGTCTTTCTGAAGAAG 92703 Query 452442 ATATTGAAAAAATGGT-AGATGAAGCAGAAAAATT 452475 ||||||| ||||| ||| ||||| ||| |||| Sbjct 92704 ATATTGAGCGCATGGTCAGA-GAAGCCGAAGAATT 92737 >seq802 Length=2293163 Score = 172 bits (190), Expect = 2e-37 Identities = 397/597 (66%), Gaps = 6/597 (1%) Strand=Plus/Plus Query 451898 GAAATTGTGCTTGTAGGAGGTTCTACACGAATTCCTAAAATTCAAGATATGTTGTCTTCT 451957 || ||||| ||||| || |||||||| || || || || ||||| | || | || | Sbjct 1715322 GATATTGTTCTTGTTGGTGGTTCTACTCGTATCCCCAAGGTTCAAAAGCTGGTTTCCGAT 1715381 Query 451958 TATTTTGGAGGAAAACAACTATGTAAGAGCGTAAATCCTGATGAAGCTGTTGCATATGGT 452017 | || || ||| ||| ||| | || ||||||||||| ||||| |||||| Sbjct 1715382 TTCTTCAACGGCAAAGAACCCAACAAGTCTATCAACCCTGATGAAGCCGTTGCCTATGGT 1715441 Query 452018 GCTGCAGTTCAAGCAGCTATTCTAACAGGTTCAGATGA---TGAAAAATTAGGAGATATT 452074 ||||| ||||| || |||||||| | ||| ||| |||||| ||| || Sbjct 1715442 GCTGCTGTTCAGGCTGCTATTCTCTCTGGT---GATACCTCTGAAAAGACTCAAGAACTT 1715498 Query 452075 CTGTTAGTAGATGTAACACCTCTATCTCTTGGAGTTGAAACAGCTGGTGGAATGATGACT 452134 || | ||||||| | ||||| || || || |||| || |||||||| | ||||| Sbjct 1715499 CTTCTCTTAGATGTTGCCCCTCTTTCCCTCGGTATTGAGACCGCTGGTGGTGTCATGACA 1715558 Query 452135 AATTTAATTAAACGAGGAACTTCTATTCCTTGTAAAAAGAGTCAAACATTTAGTACAGCA 452194 || || || || ||| || |||| || ||| | ||| || |||| Sbjct 1715559 GCCTTGATCAAGCGTAACACTACTGTTCCCACCAAGAAGTCTGAAATTTTCTCTACATAT 1715618 Query 452195 AGTGATAACCAACCAGGTGTAACTATTCAAGTGTTTGAAGGAGAACGTGCAATGACACGA 452254 ||||||||||| ||||| ||||||||| |||||||| || |||||| || Sbjct 1715619 GCGGATAACCAACCTGGTGTTCTTATTCAAGTTTTTGAAGGCGAGCGTGCACGTACCAAG 1715678 Query 452255 GATAATAATAAACTAGGAGAATTTACTCTTTCAAACATTCCTCCTATGCCAAGGGGAACT 452314 ||||| || || || ||||| ||||| || |||||| || | || | Sbjct 1715679 GATAACAACCTTCTTGGTAAATTTGAACTTTCTGGTATCCCTCCTGCTCCTCGTGGTGTT 1715738 Query 452315 CCTCAAATTGAAATTACCTATGATGTTGATGCAAATGGTATTCTTAATGTGAGTGCAGTT 452374 |||||| | || |||| | |||||||||||| || |||||| | ||||| ||| || Sbjct 1715739 CCTCAAGTCGAGGTTACATTTGATGTTGATGCCAACGGTATTTTGAATGTCTCTGCTCTT 1715798 Query 452375 GAAAAATCATCTGGAAAATCAGAAAAAATTACAATTACTAATGATAAAAACCGTTTATCT 452434 || || | |||| || || | || ||||| || ||||| || || |||| | || Sbjct 1715799 GACAAGACTACTGGTAAGTCCAACAAGATTACCATCACTAACGACAAGGGCCGTCTTTCC 1715858 Query 452435 AAAGAAGATATTGAAAAAATGGTAGATGAAGCAGAAAAATTCAAGGATGATGATGAA 452491 || ||||| |||||| ||||| | || || ||||||| || | ||| |||||| Sbjct 1715859 AAGGAAGAAATTGAACGTATGGTCAACGATGCTGAAAAATATAAAGCTGAAGATGAA 1715915 >seq15113 Length=1229483 Score = 158 bits (174), Expect = 5e-33 Identities = 287/415 (69%), Gaps = 5/415 (1%) Strand=Plus/Minus Query 451193 GGAAAGCCCTATATTCAAGTAAATTATAAAGGTGAAACTAAAACTTTTGCTCCTGAAGAA 451252 || ||||| | || ||||| | | || |||||||| || || |||| |||||| Sbjct 195911 GGCAAGCCTCACATCCAAGTTGAATTCAAGGGTGAAACCAAGGTCTTCACTCCCGAAGAA 195852 Query 451253 ATTTCATCTATGGTTCTTACTAAAATGAAAGAAACAGCAGAACAATATATTGGTTCTCCA 451312 || || || ||| |||| || ||||| ||||| | ||| || | ||| | Sbjct 195851 ATCTCTTCCATGATTCTGGTCAAGATGAAGGAAACTTCTGAAGCCTACCTGGGTGGCACT 195792 Query 451313 GTT-ACTGATGCAGTAATTACTGTTCCCGCTTATTTCAATGATGCACAACGGCAAGCAAC 451371 || ||| ||| || |||||||| ||||| || || || || | ||||| ||||| || Sbjct 195791 GTCGACTC-TGCTGTCATTACTGTCCCCGCCTACTTTAACGACTCCCAACGTCAAGCTAC 195733 Query 451372 TAAAGATGCAGGACATATTGCTGGTTTAAATGTTCTTCGAATTATTAATGAACCTACAGC 451431 || ||||| || ||| | ||||| ||||| || || |||||||||||||| || || Sbjct 195732 CAAGGATGCCGGTGCCATTTCCGGTTTGAATGTGCTCCGTATTATTAATGAACCCACTGC 195673 Query 451432 AGCTGCTCTAGCATATGGACTAGGAAAATCAAAAGAAACAGAAGaaaaaaaTATTTTAGT 451491 |||||| | || || || || ||| || || | | | || | |||| | ||| | Sbjct 195672 CGCTGCTATTGCTTACGGTCT-GGACAA--GAACGCCAAGGGTGAGACAAATGTCTTAAT 195616 Query 451492 ATTTGATTTTGGTGGAGGAACTCATGATACTTCTGTACTTTCAATTGAAGATGGGGTATT 451551 || || || |||||||| || |||| || | | | ||||||||||| | || Sbjct 195615 TTTCGACTTGGGTGGAGGTACCTTTGATGTCTCCCTCTTGACCATTGAAGATGGTATCTT 195556 Query 451552 TGAAGTAAAGGCAACCAATGGTGATACTCATCTAGGAGGTGAAGATATTGATAAT 451606 |||||| ||||| || ||||||||||||| | || ||||||||| | |||||| Sbjct 195555 TGAAGTCAAGGCTACTGCTGGTGATACTCATTTGGGTGGTGAAGATTTCGATAAT 195501 >seq513 Length=239887 Score = 136 bits (150), Expect = 2e-26 Identities = 156/210 (74%), Gaps = 0/210 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| ||||| || ||||| ||||||||||| | || |||||||| | Sbjct 208302 ATGCAGATTTTCGTCAAAACTCTTACTGGCAAAACTATTACGTTAGAAGTTGAATCTACC 208361 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | | || ||||| || ||||| |||||||| ||||| || || ||| Sbjct 208362 GATATGATTGATAATGTCAAGCAAAAGATCCAAGACAAGGAAGGCATTCCCCCAGACCAA 208421 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAGAACTTTGGCGGATTATAAT 391229 |||||| | |||||| | || || ||| | |||||||| | ||| | | || || ||| Sbjct 208422 CAACGTCTTATTTTCGCCGGCAAGCAATTAGAAGATGGTCGTACTCTTTCAGACTACAAT 208481 Query 391230 ATTGATAAGGATGCAACACTTCACTTAGTA 391259 || | ||||| | || ||||| || ||| Sbjct 208482 ATCCAGAAGGAATCTACTCTTCATTTGGTA 208511 Score = 132 bits (146), Expect = 2e-25 Identities = 123/156 (79%), Gaps = 0/156 (0%) Strand=Plus/Plus Query 391050 ATGAATATTTTCGTTAAAACACTGACTGGTAAAACTATTACTCTTGATGTTGAATCATCT 391109 ||| | |||||||| || || || ||||||||||||||||| | || |||||||| | Sbjct 203108 ATGCAGATTTTCGTCAAGACTCTTACTGGTAAAACTATTACATTAGAAGTTGAATCTACC 203167 Query 391110 GATAACATTGAAGCTATTAAACAAAAAATTCAAGATAAGGAAGGAATTCCTCCTGATCAA 391169 |||| ||||| | | || ||||||||||||||||||||||| ||||| || || ||| Sbjct 203168 GATATGATTGATAATGTCAAGCAAAAAATTCAAGATAAGGAAGGTATTCCCCCAGACCAA 203227 Query 391170 CAACGTTTAATTTTCTCAGGGAAACAACTTGAAGAT 391205 |||||| | |||||| | || || ||| | |||||| Sbjct 203228 CAACGTCTTATTTTCGCCGGCAAGCAATTAGAAGAT 203263 >seq6568 Length=250849 Score = 91.5 bits (100), Expect = 6e-13 Identities = 85/108 (79%), Gaps = 0/108 (0%) Strand=Plus/Plus Query 391151 AGGAATTCCTCCTGATCAACAACGTTTAATTTTCTCAGGGAAACAACTTGAAGATGGAAG 391210 ||| || |||||||||||||||||| | |||||| | || || |||||||||||||| | Sbjct 220609 AGGTATCCCTCCTGATCAACAACGTCTCATTTTCGCTGGTAAGCAACTTGAAGATGGCCG 220668 Query 391211 AACTTTGGCGGATTATAATATTGATAAGGATGCAACACTTCACTTAGT 391258 |||||| ||||| ||||| | ||||| | || |||||||| || Sbjct 220669 TACTTTGAGTGATTACAATATCCAAAAGGAATCTACTCTTCACTTGGT 220716 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1975322566670796