Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasitella_20parasitica_20[genbank_20GCA_5F000938895.1_202015-01- 16] 15,637 sequences; 44,910,645 total letters Query= NC_018504.1 Length=123876 Score E Sequences producing significant alignments: (Bits) Value seq513 125 6e-24 >seq513 Length=239887 Score = 125 bits (138), Expect = 6e-24 Identities = 153/209 (73%), Gaps = 0/209 (0%) Strand=Plus/Minus Query 101261 ACTAAATGAAGGGTAGATTCTTTTTGTATATTGTAATCGGCGATAGTTCTGGCATCGTCC 101320 || |||||||| |||||||| || || |||||||| || | | ||| | |||| || Sbjct 208510 ACCAAATGAAGAGTAGATTCCTTCTGGATATTGTAGTCTGAAAGAGTACGACCATCTTCT 208451 Query 101321 AATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTTATCTTGA 101380 |||||||| || || || || | ||| ||||| || || ||||||||||| || ||||| Sbjct 208450 AATTGCTTGCCGGCGAAAATAAGACGTTGTTGGTCTGGGGGAATGCCTTCCTTGTCTTGG 208391 Query 101381 ATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGACCGTTTTG 101440 || ||||| || ||| | || | | || | | ||| ||||| | || | |||||| Sbjct 208390 ATCTTTTGCTTGACATTATCAATCATATCGGTAGATTCAACTTCTAACGTAATAGTTTTG 208331 Query 101441 CCGGTTAAAGTTTTTACAAATATCTGCAT 101469 || || | |||||| || || |||||||| Sbjct 208330 CCAGTAAGAGTTTTGACGAAAATCTGCAT 208302 Score = 93.3 bits (102), Expect = 3e-14 Identities = 114/156 (73%), Gaps = 0/156 (0%) Strand=Plus/Minus Query 101314 ATCGTCCAATTGCTTACCTGCAAATATCAAACGCTGTTGATCGGGCGGAATGCCTTCTTT 101373 ||| || |||||||| || || || || | ||| ||||| || || ||||| ||||| || Sbjct 203263 ATCTTCTAATTGCTTGCCGGCGAAAATAAGACGTTGTTGGTCTGGGGGAATACCTTCCTT 203204 Query 101374 ATCTTGAATTTTTTGTTTTACAATTTCTACAGTGTCAGACGTTTCCACTTCAAGAGTGAC 101433 ||||||||||||||| || ||| | || | | || | | ||| ||||| | || | Sbjct 203203 ATCTTGAATTTTTTGCTTGACATTATCAATCATATCGGTAGATTCAACTTCTAATGTAAT 203144 Query 101434 CGTTTTGCCGGTTAAAGTTTTTACAAATATCTGCAT 101469 ||||| || || | ||| || || || |||||||| Sbjct 203143 AGTTTTACCAGTAAGAGTCTTGACGAAAATCTGCAT 203108 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 396202878872409