Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasitella_20parasitica_20[genbank_20GCA_5F000938895.1_202015-01- 16] 15,637 sequences; 44,910,645 total letters Query= NC_018875.1 Length=119082 Score E Sequences producing significant alignments: (Bits) Value seq513 105 5e-18 >seq513 Length=239887 Score = 105 bits (116), Expect = 5e-18 Identities = 151/210 (72%), Gaps = 2/210 (1%) Strand=Plus/Minus Query 48558 ACCAAATGTAGCGTGCTCTCTTTTTGAATATTGTAATCAGATAGACTTCGATCGTCGTCC 48617 |||||||| || || || || || |||||||| || || ||| | ||| | || || Sbjct 208510 ACCAAATGAAGAGTAGATTCCTTCTGGATATTGTAGTCTGAAAGAGTACGACCATCTTCT 208451 Query 48618 AACTGCTTACCGGCAAATATCAGTCGCTGTTGATCCGTGGGAACGCCCTCCTTGTCGCTA 48677 || ||||| ||||| || || || || ||||| || | ||||| ||| |||||||| Sbjct 208450 AATTGCTTGCCGGCGAAAATAAGACGTTGTTGGTCTGGGGGAATGCCTTCCTTGTCTTGG 208391 Query 48678 ATCTTTTGTTTTACAGAACCCA-CAGACTCTGACGCCTCCACCTCCACCGTAATCGTTTT 48736 |||||||| || ||| | | | || | || | | || || || | |||||| ||||| Sbjct 208390 ATCTTTTGCTTGACATTATCAATCATA-TCGGTAGATTCAACTTCTAACGTAATAGTTTT 208332 Query 48737 TCCCGTCAAAGTTTTTACAAAAATCTGCAT 48766 || || | |||||| || ||||||||||| Sbjct 208331 GCCAGTAAGAGTTTTGACGAAAATCTGCAT 208302 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 380865002459751