Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasitella_20parasitica_20[genbank_20GCA_5F000938895.1_202015-01- 16] 15,637 sequences; 44,910,645 total letters Query= NC_019401.1 Length=358663 Score E Sequences producing significant alignments: (Bits) Value seq1340 107 4e-18 >seq1340 Length=78618 Score = 107 bits (118), Expect = 4e-18 Identities = 276/414 (67%), Gaps = 16/414 (4%) Strand=Plus/Plus Query 150402 TTGGTGAACCAGGTGTTGGTAAAACACAAATCGTTGACGGATTAGCACAACGCATCGCTA 150461 ||||||| || ||||||||||| ||| || || || || || || | || ||| | Sbjct 23070 TTGGTGAGCCTGGTGTTGGTAAGACAGCTATTGTAGAAGGTTTGGCTCGTCGTATCATTG 23129 Query 150462 ATGGTGATGTTCCAGATTCTATGAAAGATGTTGAAATTCTTT-CTTTGAATATGGGTGCA 150520 | |||||||||| | || || || | || ||||| || || |||||||||| Sbjct 23130 AGCGTGATGTTCCGCAATCATTGCAA----TGCAAGCTCTTTTCTCTGGATATGGGTGCC 23185 Query 150521 TTTACTGCTGGTACTAAGTATCGTGGTGAATTCGAAGAACGTGTAGACAATTTGCTACAA 150580 || | ||||| | |||| ||||||||||| ||||| ||| | | | | || || Sbjct 23186 TTGATCGCTGGCGCCAAGTTCCGTGGTGAATTTGAAGAGCGTCTCAAGGCTGTACTGAAA 23245 Query 150581 GAACTAAAAGAACGCGATGA---TGTTATTCTGTTCATCGATGAAATCCATACTATTATG 150637 ||| | || ||| || || ||| || |||| || || || ||||||||| | || Sbjct 23246 GAAGTCAAGGAATCTGAAGAAGGTGTCATCTTGTTTATTGACGAGATCCATACTGTCCTG 23305 Query 150638 GGTGCTGGTGCGACTGGCGGCGGTTCTTTGGATATGAGCAATATGTTAAAACCTGCTCTA 150697 || |||||| | ||| ||| || ||||| || || |||| || || Sbjct 23306 GGAGCTGGTAAGGCTGAAGGC---TCGATGGATGCTGCAAACCTGCTAAAGCCAATGCTG 23362 Query 150698 TCTCGCGGTGAAATTCG-TGTCATCGGTGCAACAACCTACGATGAATATCGTAAACACAT 150756 |||| |||||| |||| ||| || ||||| || || |||||||||| || || Sbjct 23363 GCTCGTGGTGAACTTCGCTGT-ATTGGTGCTACTACTCTGTCTGAATATCGTGAA---AT 23418 Query 150757 TGAAAAAGATGCAGCACTACAGCGTCGTTTCATGAAGGTTGATATTGTTGAACC 150810 |||||| ||| | || | |||| |||||| ||||| || ||| ||||| Sbjct 23419 TGAAAAGGATCCTGCCTTTGAGCGCCGTTTCCAAAAGGTAGACGTTGGCGAACC 23472 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 1147360481339226