Alignment viewer

BLASTN 2.6.0+ Reference: Stephen F. Altschul, Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Database: Parasitella_20parasitica_20[genbank_20GCA_5F000938895.1_202015-01- 16] 15,637 sequences; 44,910,645 total letters Query= NC_019491.1 Length=291144 Score E Sequences producing significant alignments: (Bits) Value seq7507 138 2e-27 seq11881 100 5e-16 seq14752 98.7 2e-15 >seq7507 Length=243275 Score = 138 bits (152), Expect = 2e-27 Identities = 982/1565 (63%), Gaps = 58/1565 (4%) Strand=Plus/Plus Query 212859 ATGTCCTCGTTCCAGAGGCCCCTGGTCTCCAGGCACTTGACCAGGTGAGGGTTGACTATC 212918 |||||||||||||| || ||| | ||| ||| | || |||||| || || Sbjct 203108 ATGTCCTCGTTCCAAAGACCCATTTCGACCAAATCCTTCAGCAACCAAGGGTTTACAATT 203167 Query 212919 TGGAAGTCACCTGAGAGCACCCTCCTCTGGTAAA--AGTTTGAAGTGTAGGGCTCGATGC 212976 ||||| ||||| | || || | || |||| | ||||||| ||||||||||| | || Sbjct 203168 TGGAATTCACCAGCAAGAACACG--TCGGGTATACAAGTTTGATGTGTAGGGCTCAAAGC 203225 Query 212977 TCTCGTTGTTCCCCAGAATCTGTGCAGTGCTGGCTGTGGGCATGGGAGCCACCAGGAGAC 213036 |||||| |||| || || | || ||| || ||||| ||||| | || ||| Sbjct 203226 ATTCGTTGAAGCCCATGATTTGAGAGGTTGAGGCAGTAGGCATAGGAGCAAGCAAGAGGG 203285 Query 213037 TGTTCCTCACTCCGTGCTCGCCGATGAGG-CGCCGAAGCTCTGCCCAGTCCCATCTGCCA 213095 ||| | || ||||| | | || | ||| |||||| ||||| | Sbjct 203286 AGTTACGGACGCCGTGATTTGCAATCTTTTCTTTCAAGGA-TGCCCAATCCCAA-----A 203339 Query 213096 GACAGGTCCTCGTCCTTCACGTTCCACATGTCAAACTGCAAGATGCCTTTGCTCACGGGG 213155 || | || || || ||||||||||| | |||| ||||||| | || || Sbjct 203340 GAGAAGTAGGTGTG----ACATTCCACATGTCGTATTGCAGAATGCCTTGGGAAACAGGA 203395 Query 213156 CTGCCCTGGTAAGAGGAGTAGGGGCCATGCTCCTTGGCCAGCTCGCAGGACGCCTGCAGG 213215 || || | || | || |||||| | || || || || || || | |||| Sbjct 203396 CTACCTTCATATGTCTCATACGGGCCAAATTGCTGAGCGAGTTCATTAGAAGCTTCCAGG 203455 Query 213216 GCAGCGTAGTAGATGGTTTCAAATATCTCCCTGTTGAGCTTCTTGGCCTCTGGGGACGTG 213275 ||||| | |||||| ||||| || |||| | || |||| ||||||||| || || | Sbjct 203456 GCAGCATGGTAGATTGTTTCGAAAATCTGAATATTCAGCTGCTTGGCCTCAGGCGAGTCG 203515 Query 213276 AAGGGCATCATCATGCGTTGGAACACATCAGCCAGCCCCTGGACCCCGATGCCGATGGGT 213335 || | | | |||| | || ||||||||| || || || || | || || || Sbjct 203516 AAAGCAAACTTCATCAGCATAAAAGCATCAGCCAAGCCTTGAACACCCAAACCAATAGGA 203575 Query 213336 CTGTGTCTCAGGTTAGACTTGGAGCACTCCTCCAAG----GGGTAAAAGTTGCAGTCGAT 213391 | |||||| ||| || | || || || ||| || ||| ||||| ||||| Sbjct 203576 CGATGTCTCTTGTTGGA----GCGCTCTGCTTCAACCACAGGATAATAGTTGACATCGAT 203631 Query 213392 GATCTTGTTGAGGTTGCGGGTGGCCACTTTGGTGACATGGGCCAGGTA-CTCGTGATTGA 213450 |||||||| | || |||| || || ||||||| || | | || || || Sbjct 203632 AATCTTGTTCAAATTCTTGGTGATGACCTTAGTGACAT----CATGAAGCTTTTG---GA 203684 Query 213451 ACACGTAGCCCCCG---TCCTGCACAAACTCAGGCAGGGCGATGCTGGCCAGGTTGCAAA 213507 | |||| | | | || ||||| || | ||| ||| |||||| || || | Sbjct 203685 AATCGTATCTCTCTCTATCGACAACAAAAGAGGGTAAGGCAATGGAGGCCAGATTACAGA 203744 Query 213508 CGGCCACCTCCTGAGAGTCTGTGTACTCCATGATCTCGGTGCACAGGTTGCTGCATCGGA 213567 |||| || || | || | | || || | ||| || || || ||||| || || || Sbjct 203745 CGGCTACTTCGTCAGGGCTGGAATATTCAACGATTTCAGTACAAAGGTTACTACACTTGA 203804 Query 213568 TGGTGCCCAGGTTCTGGTGGTTTGACTTTGCGTTGGCAGAATCCTTGTAGAGCATGTAGG 213627 | || ||||| ||||| ||||| |||| ||| || |||||| ||||||||| | | Sbjct 203805 TAGTACCCAGATTCTGTTGGTTGCTCTTTCTATTGCAAGCATCCTTATAGAGCATGAAAG 203864 Query 213628 GGGACCCGGTCTCTAGCTGGGACACCAGTATCTGGCT--CCAGAGGTACCTGGCCTTGAC 213685 | ||||| || || | | ||| || ||| ||| || | ||||||| Sbjct 203865 GATTACCGGTTTCAGTTTGAGCCTCCAAGAT--GGCATACCAAAGCTTTTGTGCCTTGAT 203922 Query 213686 CACCCGCCTGACAGCTCCGGGCGTAGCCTCGTACTGTTCGTAGA-GCTCGTTGAATTCGT 213744 || ||||| | | ||| |||||||| | | | || |||||||| | Sbjct 203923 GGTTTCTCT---AGCTCTGCCTTCACGCTCATACTGTTCAAACAAGGTC-TTGAATTCAT 203978 Query 213745 GGCCCCAGACCCTGTCCAGTCCCGGA--CAGGATGCGGGACACATGAGGCTCCAGTCCCC 213802 |||||| || || || ||| | | || ||||| | ||| ||| || || Sbjct 203979 CGCCCCACACTTCACATAGGCCAGGAGCCTCGTTG--GGACAGAAGAGAGACCACTCACC 204036 Query 213803 GTCATCTCTGACTCTCTGCATGAACAGGTCCGGGACCCACAGCGCGGTGAACAGGTCCCT 213862 || ||||||||||| || ||| || || || || ||||| || || |||| || | Sbjct 204037 GTTATCTCTGACTCGCTCCATAAAGAGATCAGGCACCCAAAGAGCATAAAACAAATCGCG 204096 Query 213863 GGTCCTCCTCTCGTCCACTCCAGAGTTTTTGCGCAGATCTAGAAAGTCAAAGATGTCCGC 213922 || || | |||||| ||| |||||||||| ||||| || || || || || || Sbjct 204097 GGCTCTAATTTCGTCCTTACCAAAGTTTTTGCGGAGATCCAGGAACATGAATATATCAGC 204156 Query 213923 GTGCCACGGCTCCATGTAGATGGCAAAGGCGCCCG---GCCTCTTGCCGCCCTGGTCCAC 213979 ||||| || |||| || ||||| || ||||| | || | || || || || || || Sbjct 204157 ATGCCAGGGTTCCAGATACATGGCGAAAGCGCCAGGACGCTTATTACCACCTTGATCGAC 204216 Query 213980 CAGCCTGGCCACCATGTTGAAGATGCGCAGGACGGGTACCAGCCCGTTGGACTGTCCGTT 214039 | |||| |||| || | ||||| | ||| | || || || || | ||||| Sbjct 204217 ATAGCGGGCCGTGTTGTTAAACACACGCAGCATGGGCAAGAGGCCATTAGAGTAGCCGTT 204276 Query 214040 GGTTCCCGCTATATACGAGCCGGAGGCCCTCAGGTTGCTCATGGAGAGCCCTATGCCACC 214099 ||| || || || || || || | || | | ||| || | || |||||||| Sbjct 204277 GGTACCAGCAATGTAAGAACCAGTAGCACGGACATTGTGAATATTCAAGCCGATGCCACC 204336 Query 214100 GGCGTACTTGGAGATCATGGCGCAGCGCCTCACAGTCTCCATGATGCCGGCCATGCTGTC 214159 || ||| || || || ||| | | | || || ||| || | || ||| Sbjct 204337 AGCCGTCTTTGAAATTTGAGCACAGATCTTGAGGGTTTCGTAGATACCTTCGATCGAGTC 204396 Query 214160 ATCTGTGAGGTTCAGCAAGAAGCAGCTCGAGAGCTG-GGGCCTGGACGAGCCAGAGTTGA 214218 ||| | | | ||| |||||| || || || || |||| ||| | ||||| |||| Sbjct 204397 CTCTTTCATGGTCAACAAGAAACAAGAGGACAGTTGTGGGCGAGGA-GTGCCAGCATTGA 204455 Query 214219 AAAGCGTGGGGCTGGCATGGATCATAAACTTGTTAGAGAGGAGCCTGTAGGTCTCCAGGA 214278 | | ||||| |||||||| | | | | | || | || |||| || || | | Sbjct 204456 ACAAGGTGGGACTGGCATGTGTGAAATAACGCTCTGACATTAGGTTGTACGTTTCTATGG 204515 Query 214279 CTGAGGGGATGTCGTGCTTGTGGATCTGTAGAGCGCACCTCATCAGCATGTGCTGGGGCC 214338 | | | ||| || || ||||| | |||| | ||| | || ||||| || | Sbjct 204516 CAGCGTCGATATCTTGGCCATGGATACCAACAGCGACACGCATGATCAAATGCTGAGGTC 204575 Query 214339 TCTCTATGGGTCCTTTGGGGCC---CTTGAGCAGGTAGGAGCGCTCCAGAGTCTTGAACC 214395 |||| || | |||||| | | ||||||| ||| |||||||||| |||||||| | Sbjct 204576 TCTC---GGCTACTTTGGAGTCGATTTTGAGCAAGTACGAGCGCTCCAATGTCTTGAAGC 204632 Query 214396 CAAAG 214400 ||||| Sbjct 204633 CAAAG 204637 >seq11881 Length=132943 Score = 100 bits (110), Expect = 5e-16 Identities = 269/409 (66%), Gaps = 12/409 (3%) Strand=Plus/Plus Query 47975 TCGATGTATTTTGACATGAGGGTGATGTTCATGCCTATGAGGGACACGGGCAAAGCCTTT 48034 || ||||||| |||||||| || ||||||||| || || || |||||||| | Sbjct 44681 TCAATGTATTGGCACATGAGGTTGGCGTTCATGCCAATAAGATTAACAGGCAAAGCGTCA 44740 Query 48035 GTGAGAAACTCCTTCTCTATCTGCACGGCTTCCCCCACAATCTGCTTAACGCGGGACTCT 48094 || | || || | ||| || | || || || | | || ||| || || |||| Sbjct 44741 GTCAAGAATTCTTGCTCAATTTCAACAGCCTCTGCGATGATGCTCTTTACACG---CTCT 44797 Query 48095 ---GAGGGTTTGTTGCGCAGGTGCTTGGCATAGAGCATGCAGGCAAAGTCCCTGTGCAAG 48151 ||||| | || ||| || || | | | | ||||||||||| | || | | Sbjct 44798 TGGGAGGGGGTTTTCTTCAGATG---GGTAAACAAGAGACAGGCAAAGTCGGTATGAAGG 44854 Query 48152 CCTTCGTCCCGGCTGATGAGCACGTTGGAGAAGCAGAGACCAGGCATGACCCCCCTCTGT 48211 || ||||| || ||| | | || || ||| | |||||||||| || | || Sbjct 44855 CCCTCGTCACGAGAGATCAATTCATTAGAAAAGGTCAACCCAGGCATGAGGCCGCGCTTC 44914 Query 48212 TTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAAGATGCCCTCCACTGCCGCGAAC 48271 |||||||||||||| | || || ||||| ||||||||||| || || || || || || Sbjct 44915 TTGAGCCAGAAAATGGAGGCAAATGAGCCTGAGAAGAAGATACCTTCGACGGCAGCAAAA 44974 Query 48272 GCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCTGAGATCCAGGAAAGCGCCCAGTCT 48331 || | || || | |||||| | ||| | |||||||| | |||||||| Sbjct 44975 GCAACTAATCTTTCAGCAAAAGAA---TCATTGCCAGAGATCCATTTGAAGGCCCAGTCA 45031 Query 48332 GCCTTCTTCTTGATGCATGGCATCGTCTCTATGGCCCGGAAGAGCTTCT 48380 ||||| ||||||| || || || || || ||||| |||||| ||| Sbjct 45032 GCCTTTCTCTTGATACAGGGGATGGTTTCAATGGCGTCAAAGAGCATCT 45080 >seq14752 Length=160396 Score = 98.7 bits (108), Expect = 2e-15 Identities = 250/376 (66%), Gaps = 11/376 (3%) Strand=Plus/Minus Query 48190 ACCAGGCATGACCCCCCTCTGTTTGAGCCAGAAAATTGCCGCGAAAGAGCCAGAGAAGAA 48249 ||||||||| | || | || |||||||| || || | || || || ||||| ||||| Sbjct 137720 ACCAGGCATTAAACCACGCTTCTTGAGCCAAAAGATAGAGGCAAACGATCCAGAAAAGAA 137661 Query 48250 GATGCCCTCCACTGCCGCGAACGCGGTGAGCCTCTCTCCGAAAGAAGCGTTCTTGTCT-- 48307 ||| |||||||| || || || || | | | || |||| ||| || Sbjct 137660 GATACCCTCCACAGCAGCAAAAGCAACAATACGGACACCAAAAGGTTGGTTTGATTCATT 137601 Query 48308 -GAGATCCAG--GAAAGCGCCCAGTCTGCCTTCTTCTTGATGCATGGCATCGTCTCTATG 48364 |||||||| |||||| ||||| ||||| | ||| ||| || || || || ||| Sbjct 137600 AGAGATCCATTTGAAAGC--CCAGTTAGCCTTATCCTTAATGACAGGAATGGTTTCGATG 137543 Query 48365 GCCCGGAAGAGC--TTCTTGCACTCACCTGCGTCCGCAACATAGGTAGTGAGCAGCTTTG 48422 || || | ||||| | ||| | || || || ||| || || | Sbjct 137542 GCATTAAATAAGAATTCTTTC--TCAATAGAATCTTTAATGTAAGTATCGATCAATAGCG 137485 Query 48423 CGTACATCTCAGAGTGCACATTCTCTATAGCGATCTGGAACCCGTAGAAGGCCCTGGCCT 48482 |||||| |||||||| | ||||| || |||||| || ||||||||| | | |||| Sbjct 137484 AGTACATTTCAGAGTGAATGTTCTCAATCATGATCTGAAAACCGTAGAAGCACTTTGCCT 137425 Query 48483 CAAACACCTGCACTTCTGTGGAGAATCTCTCCAGCAGATTCTCATTGACTATCCCATCTG 48542 | |||| ||||| | |||| | | || ||||||||||||||| || ||||| | Sbjct 137424 CGGCTACCTTGACTTCATCGCAGAAGTTTTTCACCAGATTCTCATTGACAATACCATCAG 137365 Query 48543 AAGCAGCAAAGAAGGC 48558 ||| |||||||||||| Sbjct 137364 AAGTAGCAAAGAAGGC 137349 Lambda K H 0.634 0.408 0.912 Gapped Lambda K H 0.625 0.410 0.780 Effective search space used: 931350720270080